data_W1F # _chem_comp.id W1F _chem_comp.name "4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-methoxy-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H15 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-04-24 _chem_comp.pdbx_modified_date 2023-11-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 277.276 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W1F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OU7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W1F C1 C1 C 0 1 N N S N N N 24.878 18.073 -7.480 -2.163 0.674 -0.889 C1 W1F 1 W1F N2 N1 N 0 1 N N N N N N 25.756 18.975 -8.209 -0.919 -0.064 -0.657 N2 W1F 2 W1F C3 C2 C 0 1 N N N N N N 22.561 17.842 -6.659 -3.510 -1.418 -0.833 C3 W1F 3 W1F C4 C3 C 0 1 N N N N N N 22.321 16.651 -7.536 -4.064 -0.945 0.485 C4 W1F 4 W1F C5 C4 C 0 1 N N N N N N 24.665 16.790 -8.243 -2.790 1.033 0.431 C5 W1F 5 W1F C6 C5 C 0 1 N N N N N N 26.860 19.482 -7.664 0.232 0.605 -0.447 C6 W1F 6 W1F C10 C6 C 0 1 Y N N N N N 29.914 21.245 -10.117 3.833 -1.537 0.225 C10 W1F 7 W1F C11 C7 C 0 1 Y N N N N N 30.052 21.045 -8.733 2.638 -2.222 0.007 C11 W1F 8 W1F C12 C8 C 0 1 Y N N N N N 29.036 20.489 -7.994 1.479 -1.535 -0.209 C12 W1F 9 W1F C13 C9 C 0 1 N N N N N N 26.073 20.503 -11.728 3.954 2.553 0.233 C13 W1F 10 W1F C2 C10 C 0 1 N N N N N N 23.558 18.807 -7.241 -3.136 -0.201 -1.687 C2 W1F 11 W1F N1 N2 N 0 1 N N N N N N 23.451 16.151 -8.151 -3.677 0.220 1.026 N1 W1F 12 W1F O1 O1 O 0 1 N N N N N N 25.574 16.350 -8.921 -2.489 2.077 0.969 O1 W1F 13 W1F O2 O2 O 0 1 N N N N N N 21.349 15.967 -7.443 -4.877 -1.630 1.068 O2 W1F 14 W1F O3 O3 O 0 1 N N N N N N 27.132 19.221 -6.480 0.238 1.822 -0.449 O3 W1F 15 W1F C7 C11 C 0 1 Y N N N N N 27.828 20.124 -8.582 1.483 -0.136 -0.213 C7 W1F 16 W1F C8 C12 C 0 1 Y N N N N N 27.690 20.317 -9.977 2.683 0.559 0.006 C8 W1F 17 W1F C9 C13 C 0 1 Y N N N N N 28.727 20.835 -10.738 3.853 -0.148 0.224 C9 W1F 18 W1F N3 N3 N 0 1 N N N N N N 30.947 21.818 -10.855 5.007 -2.246 0.449 N3 W1F 19 W1F O4 O4 O 0 1 N N N N N N 26.559 19.835 -10.558 2.696 1.915 0.003 O4 W1F 20 W1F H1 H1 H 0 1 N N N N N N 25.326 17.834 -6.504 -1.948 1.584 -1.450 H1 W1F 21 W1F H7 H2 H 0 1 N N N N N N 25.523 19.222 -9.150 -0.923 -1.034 -0.655 H7 W1F 22 W1F H5 H3 H 0 1 N N N N N N 21.606 18.369 -6.514 -2.623 -2.026 -0.658 H5 W1F 23 W1F H4 H4 H 0 1 N N N N N N 22.938 17.492 -5.687 -4.262 -2.011 -1.353 H4 W1F 24 W1F H9 H5 H 0 1 N N N N N N 30.970 21.333 -8.243 2.631 -3.302 0.008 H9 W1F 25 W1F H10 H6 H 0 1 N N N N N N 29.177 20.332 -6.935 0.558 -2.072 -0.378 H10 W1F 26 W1F H14 H7 H 0 1 N N N N N N 25.159 20.004 -12.083 3.824 3.634 0.206 H14 W1F 27 W1F H15 H8 H 0 1 N N N N N N 25.847 21.552 -11.484 4.337 2.258 1.210 H15 W1F 28 W1F H13 H9 H 0 1 N N N N N N 26.840 20.467 -12.516 4.660 2.251 -0.540 H13 W1F 29 W1F H3 H10 H 0 1 N N N N N N 23.720 19.638 -6.539 -4.033 0.371 -1.923 H3 W1F 30 W1F H2 H11 H 0 1 N N N N N N 23.177 19.201 -8.195 -2.658 -0.534 -2.608 H2 W1F 31 W1F H6 H12 H 0 1 N N N N N N 23.381 15.244 -8.566 -4.052 0.485 1.880 H6 W1F 32 W1F H8 H13 H 0 1 N N N N N N 28.620 20.922 -11.809 4.780 0.380 0.393 H8 W1F 33 W1F H12 H14 H 0 1 N N N N N N 31.707 22.045 -10.246 4.995 -3.216 0.454 H12 W1F 34 W1F H11 H15 H 0 1 N N N N N N 31.259 21.170 -11.550 5.839 -1.771 0.601 H11 W1F 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W1F C13 O4 SING N N 1 W1F N3 C10 SING N N 2 W1F C9 C10 DOUB Y N 3 W1F C9 C8 SING Y N 4 W1F O4 C8 SING N N 5 W1F C10 C11 SING Y N 6 W1F C8 C7 DOUB Y N 7 W1F O1 C5 DOUB N N 8 W1F C11 C12 DOUB Y N 9 W1F C7 C12 SING Y N 10 W1F C7 C6 SING N N 11 W1F C5 N1 SING N N 12 W1F C5 C1 SING N N 13 W1F N2 C6 SING N N 14 W1F N2 C1 SING N N 15 W1F N1 C4 SING N N 16 W1F C6 O3 DOUB N N 17 W1F C4 O2 DOUB N N 18 W1F C4 C3 SING N N 19 W1F C1 C2 SING N N 20 W1F C2 C3 SING N N 21 W1F C1 H1 SING N N 22 W1F N2 H7 SING N N 23 W1F C3 H5 SING N N 24 W1F C3 H4 SING N N 25 W1F C11 H9 SING N N 26 W1F C12 H10 SING N N 27 W1F C13 H14 SING N N 28 W1F C13 H15 SING N N 29 W1F C13 H13 SING N N 30 W1F C2 H3 SING N N 31 W1F C2 H2 SING N N 32 W1F N1 H6 SING N N 33 W1F C9 H8 SING N N 34 W1F N3 H12 SING N N 35 W1F N3 H11 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W1F InChI InChI 1.06 "InChI=1S/C13H15N3O4/c1-20-10-6-7(14)2-3-8(10)12(18)15-9-4-5-11(17)16-13(9)19/h2-3,6,9H,4-5,14H2,1H3,(H,15,18)(H,16,17,19)/t9-/m0/s1" W1F InChIKey InChI 1.06 SLGDHJMSLPDYEO-VIFPVBQESA-N W1F SMILES_CANONICAL CACTVS 3.385 "COc1cc(N)ccc1C(=O)N[C@H]2CCC(=O)NC2=O" W1F SMILES CACTVS 3.385 "COc1cc(N)ccc1C(=O)N[CH]2CCC(=O)NC2=O" W1F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1C(=O)N[C@H]2CCC(=O)NC2=O)N" W1F SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1C(=O)NC2CCC(=O)NC2=O)N" # _pdbx_chem_comp_identifier.comp_id W1F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-methoxy-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W1F "Create component" 2023-04-24 PDBE W1F "Initial release" 2023-11-15 RCSB #