data_W1L # _chem_comp.id W1L _chem_comp.name "(1R,2S,5S)-N~3~,N~3~-bis(4-chlorophenyl)-N~2~-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2,3-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 Cl2 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-21 _chem_comp.pdbx_modified_date 2024-09-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 559.484 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W1L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8U9T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W1L C1 C1 C 0 1 Y N N N N N -8.970 -18.113 -19.377 2.614 0.808 -0.225 C1 W1L 1 W1L C10 C2 C 0 1 Y N N N N N -12.684 -19.960 -18.580 3.890 -3.461 1.086 C10 W1L 2 W1L C11 C3 C 0 1 Y N N N N N -13.762 -19.298 -19.150 4.404 -3.878 -0.129 C11 W1L 3 W1L C12 C4 C 0 1 N N N N N N -9.976 -16.250 -18.173 0.754 -0.533 0.414 C12 W1L 4 W1L C13 C5 C 0 1 N N N N N N -8.313 -15.096 -19.714 0.344 1.937 -0.025 C13 W1L 5 W1L C14 C6 C 0 1 N N S N N N -9.267 -13.962 -17.781 -1.451 0.674 0.787 C14 W1L 6 W1L C15 C7 C 0 1 N N N N N N -10.680 -13.443 -17.910 -2.337 0.676 -0.432 C15 W1L 7 W1L C16 C8 C 0 1 N N S N N N -7.808 -13.662 -19.738 -0.366 2.860 0.989 C16 W1L 8 W1L C17 C9 C 0 1 N N S N N N -12.632 -12.420 -16.877 -4.516 0.426 -1.493 C17 W1L 9 W1L C18 C10 C 0 1 N N N N N N -6.855 -13.330 -18.588 -0.403 2.426 2.456 C18 W1L 10 W1L C19 C11 C 0 1 N N N N N N -13.478 -13.169 -15.835 -5.743 -0.449 -1.233 C19 W1L 11 W1L C2 C12 C 0 1 Y N N N N N -7.790 -18.327 -18.660 3.248 1.537 0.773 C2 W1L 12 W1L C20 C13 C 0 1 N N S N N N -13.670 -14.606 -16.317 -5.304 -1.903 -1.053 C20 W1L 13 W1L C21 C14 C 0 1 N N N N N N -14.662 -14.692 -17.469 -6.530 -2.815 -0.819 C21 W1L 14 W1L C22 C15 C 0 1 N N N N N N -15.509 -15.935 -17.186 -6.598 -2.862 0.723 C22 W1L 15 W1L C23 C16 C 0 1 N N N N N N -5.858 -12.253 -19.033 -0.687 3.504 3.504 C23 W1L 16 W1L C24 C17 C 0 1 N N N N N N -14.286 -15.491 -15.270 -4.482 -2.056 0.208 C24 W1L 17 W1L C25 C18 C 0 1 N N N N N N -6.255 -14.552 -17.889 0.568 1.325 2.891 C25 W1L 18 W1L C26 C19 C 0 1 Y N N N N N -13.616 -17.998 -19.627 4.139 -3.156 -1.279 C26 W1L 19 W1L C27 C20 C 0 1 Y N N N N N -12.386 -17.355 -19.528 3.360 -2.017 -1.217 C27 W1L 20 W1L C3 C21 C 0 1 Y N N N N N -6.767 -19.055 -19.282 3.800 2.769 0.481 C3 W1L 21 W1L C34 C22 C 0 1 N N R N N N -8.339 -12.968 -18.489 -1.549 2.027 1.525 C34 W1L 22 W1L C4 C23 C 0 1 Y N N N N N -6.949 -19.564 -20.567 3.723 3.276 -0.804 C4 W1L 23 W1L C5 C24 C 0 1 Y N N N N N -8.130 -19.346 -21.254 3.092 2.552 -1.800 C5 W1L 24 W1L C6 C25 C 0 1 Y N N N N N -9.137 -18.621 -20.658 2.543 1.317 -1.515 C6 W1L 25 W1L C7 C26 C 0 1 Y N N N N N -11.304 -18.024 -18.959 2.843 -1.597 0.002 C7 W1L 26 W1L C8 C27 C 0 1 N N N N N N -12.596 -10.924 -16.593 -4.965 1.857 -1.796 C8 W1L 27 W1L C9 C28 C 0 1 Y N N N N N -11.454 -19.322 -18.484 3.111 -2.323 1.155 C9 W1L 28 W1L N1 N1 N 0 1 N N N N N N -10.049 -17.405 -18.843 2.053 -0.442 0.068 N1 W1L 29 W1L N13 N2 N 0 1 N N N N N N -9.208 -15.203 -18.553 -0.027 0.565 0.395 N13 W1L 30 W1L N16 N3 N 0 1 N N N N N N -11.266 -12.922 -16.835 -3.655 0.426 -0.308 N16 W1L 31 W1L N23 N4 N 0 1 N N N N N N -15.274 -16.227 -15.785 -5.229 -2.600 1.184 N23 W1L 32 W1L O26 O1 O 0 1 N N N N N N -13.908 -15.537 -14.115 -3.318 -1.735 0.322 O26 W1L 33 W1L O33 O2 O 0 1 N N N N N N -10.691 -16.163 -17.187 0.286 -1.606 0.743 O33 W1L 34 W1L O38 O3 O 0 1 N N N N N N -11.244 -13.532 -18.997 -1.863 0.901 -1.525 O38 W1L 35 W1L O9 O4 O 0 1 N N N N N N -13.878 -10.293 -16.707 -5.789 2.334 -0.730 O9 W1L 36 W1L CL28 CL1 CL 0 0 N N N N N N -5.679 -20.514 -21.420 4.417 4.826 -1.167 CL28 W1L 37 W1L CL29 CL2 CL 0 0 N N N N N N -15.352 -20.132 -19.261 5.384 -5.309 -0.211 CL29 W1L 38 W1L H1 H1 H 0 1 N N N N N N -12.801 -20.969 -18.212 4.095 -4.029 1.982 H1 W1L 39 W1L H2 H2 H 0 1 N N N N N N -8.863 -15.321 -20.640 -0.015 2.136 -1.035 H2 W1L 40 W1L H3 H3 H 0 1 N N N N N N -7.470 -15.794 -19.609 1.424 2.071 0.027 H3 W1L 41 W1L H4 H4 H 0 1 N N N N N N -8.978 -14.104 -16.729 -1.725 -0.143 1.454 H4 W1L 42 W1L H5 H5 H 0 1 N N N N N N -7.738 -13.114 -20.689 -0.446 3.918 0.740 H5 W1L 43 W1L H6 H6 H 0 1 N N N N N N -13.064 -12.587 -17.875 -3.962 0.032 -2.345 H6 W1L 44 W1L H7 H7 H 0 1 N N N N N N -12.960 -13.168 -14.865 -6.248 -0.108 -0.329 H7 W1L 45 W1L H8 H8 H 0 1 N N N N N N -14.457 -12.678 -15.728 -6.426 -0.378 -2.079 H8 W1L 46 W1L H9 H9 H 0 1 N N N N N N -7.670 -17.943 -17.658 3.308 1.142 1.776 H9 W1L 47 W1L H10 H10 H 0 1 N N N N N N -12.701 -15.020 -16.633 -4.736 -2.239 -1.921 H10 W1L 48 W1L H11 H11 H 0 1 N N N N N N -14.131 -14.798 -18.427 -7.433 -2.368 -1.236 H11 W1L 49 W1L H12 H12 H 0 1 N N N N N N -15.296 -13.793 -17.499 -6.362 -3.809 -1.233 H12 W1L 50 W1L H13 H13 H 0 1 N N N N N N -16.574 -15.728 -17.366 -7.275 -2.092 1.095 H13 W1L 51 W1L H14 H14 H 0 1 N N N N N N -15.187 -16.776 -17.817 -6.926 -3.846 1.057 H14 W1L 52 W1L H15 H15 H 0 1 N N N N N N -5.176 -12.019 -18.203 -0.976 4.429 3.004 H15 W1L 53 W1L H16 H16 H 0 1 N N N N N N -5.277 -12.623 -19.891 -1.497 3.174 4.154 H16 W1L 54 W1L H17 H17 H 0 1 N N N N N N -6.406 -11.345 -19.325 0.209 3.678 4.099 H17 W1L 55 W1L H18 H18 H 0 1 N N N N N N -5.586 -14.221 -17.081 1.321 1.747 3.556 H18 W1L 56 W1L H19 H19 H 0 1 N N N N N N -7.064 -15.167 -17.467 0.019 0.542 3.414 H19 W1L 57 W1L H20 H20 H 0 1 N N N N N N -5.684 -15.147 -18.617 1.055 0.903 2.012 H20 W1L 58 W1L H21 H21 H 0 1 N N N N N N -14.457 -17.489 -20.074 4.541 -3.483 -2.227 H21 W1L 59 W1L H22 H22 H 0 1 N N N N N N -12.271 -16.344 -19.890 3.154 -1.453 -2.115 H22 W1L 60 W1L H23 H23 H 0 1 N N N N N N -5.834 -19.222 -18.764 4.293 3.336 1.257 H23 W1L 61 W1L H24 H24 H 0 1 N N N N N N -8.636 -11.910 -18.548 -2.538 2.463 1.673 H24 W1L 62 W1L H25 H25 H 0 1 N N N N N N -8.261 -19.742 -22.250 3.037 2.948 -2.803 H25 W1L 63 W1L H26 H26 H 0 1 N N N N N N -10.061 -18.447 -21.189 2.051 0.752 -2.293 H26 W1L 64 W1L H27 H27 H 0 1 N N N N N N -12.222 -10.772 -15.570 -4.090 2.500 -1.894 H27 W1L 65 W1L H28 H28 H 0 1 N N N N N N -11.909 -10.449 -17.309 -5.532 1.871 -2.727 H28 W1L 66 W1L H29 H29 H 0 1 N N N N N N -10.613 -19.835 -18.040 2.707 -2.001 2.103 H29 W1L 67 W1L H30 H30 H 0 1 N N N N N N -10.755 -12.874 -15.977 -4.034 0.245 0.567 H30 W1L 68 W1L H31 H31 H 0 1 N N N N N N -15.794 -16.904 -15.263 -4.906 -2.794 2.077 H31 W1L 69 W1L H32 H32 H 0 1 N N N N N N -13.793 -9.366 -16.520 -6.111 3.237 -0.855 H32 W1L 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W1L CL28 C4 SING N N 1 W1L C5 C6 DOUB Y N 2 W1L C5 C4 SING Y N 3 W1L C6 C1 SING Y N 4 W1L C4 C3 DOUB Y N 5 W1L C16 C13 SING N N 6 W1L C16 C18 SING N N 7 W1L C16 C34 SING N N 8 W1L C13 N13 SING N N 9 W1L C26 C27 DOUB Y N 10 W1L C26 C11 SING Y N 11 W1L C27 C7 SING Y N 12 W1L C1 N1 SING N N 13 W1L C1 C2 DOUB Y N 14 W1L C3 C2 SING Y N 15 W1L CL29 C11 SING N N 16 W1L C11 C10 DOUB Y N 17 W1L C23 C18 SING N N 18 W1L O38 C15 DOUB N N 19 W1L C7 N1 SING N N 20 W1L C7 C9 DOUB Y N 21 W1L N1 C12 SING N N 22 W1L C18 C34 SING N N 23 W1L C18 C25 SING N N 24 W1L C10 C9 SING Y N 25 W1L N13 C12 SING N N 26 W1L N13 C14 SING N N 27 W1L C34 C14 SING N N 28 W1L C12 O33 DOUB N N 29 W1L C15 C14 SING N N 30 W1L C15 N16 SING N N 31 W1L C21 C22 SING N N 32 W1L C21 C20 SING N N 33 W1L C22 N23 SING N N 34 W1L C17 N16 SING N N 35 W1L C17 C8 SING N N 36 W1L C17 C19 SING N N 37 W1L O9 C8 SING N N 38 W1L C20 C19 SING N N 39 W1L C20 C24 SING N N 40 W1L N23 C24 SING N N 41 W1L C24 O26 DOUB N N 42 W1L C10 H1 SING N N 43 W1L C13 H2 SING N N 44 W1L C13 H3 SING N N 45 W1L C14 H4 SING N N 46 W1L C16 H5 SING N N 47 W1L C17 H6 SING N N 48 W1L C19 H7 SING N N 49 W1L C19 H8 SING N N 50 W1L C2 H9 SING N N 51 W1L C20 H10 SING N N 52 W1L C21 H11 SING N N 53 W1L C21 H12 SING N N 54 W1L C22 H13 SING N N 55 W1L C22 H14 SING N N 56 W1L C23 H15 SING N N 57 W1L C23 H16 SING N N 58 W1L C23 H17 SING N N 59 W1L C25 H18 SING N N 60 W1L C25 H19 SING N N 61 W1L C25 H20 SING N N 62 W1L C26 H21 SING N N 63 W1L C27 H22 SING N N 64 W1L C3 H23 SING N N 65 W1L C34 H24 SING N N 66 W1L C5 H25 SING N N 67 W1L C6 H26 SING N N 68 W1L C8 H27 SING N N 69 W1L C8 H28 SING N N 70 W1L C9 H29 SING N N 71 W1L N16 H30 SING N N 72 W1L N23 H31 SING N N 73 W1L O9 H32 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W1L SMILES ACDLabs 12.01 "CC1(C)C2C(C(=O)NC(CC3CCNC3=O)CO)N(CC21)C(=O)N(c1ccc(Cl)cc1)c1ccc(Cl)cc1" W1L InChI InChI 1.06 "InChI=1S/C28H32Cl2N4O4/c1-28(2)22-14-33(24(23(22)28)26(37)32-19(15-35)13-16-11-12-31-25(16)36)27(38)34(20-7-3-17(29)4-8-20)21-9-5-18(30)6-10-21/h3-10,16,19,22-24,35H,11-15H2,1-2H3,(H,31,36)(H,32,37)/t16-,19-,22-,23-,24-/m0/s1" W1L InChIKey InChI 1.06 RJGDIXDMKZVPNX-MUTMVCIVSA-N W1L SMILES_CANONICAL CACTVS 3.385 "CC1(C)[C@H]2CN([C@@H]([C@@H]12)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C(=O)N(c4ccc(Cl)cc4)c5ccc(Cl)cc5" W1L SMILES CACTVS 3.385 "CC1(C)[CH]2CN([CH]([CH]12)C(=O)N[CH](CO)C[CH]3CCNC3=O)C(=O)N(c4ccc(Cl)cc4)c5ccc(Cl)cc5" W1L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)N(c3ccc(cc3)Cl)c4ccc(cc4)Cl)C(=O)N[C@@H](C[C@@H]5CCNC5=O)CO)C" W1L SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)N(c3ccc(cc3)Cl)c4ccc(cc4)Cl)C(=O)NC(CC5CCNC5=O)CO)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W1L "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,5S)-N~3~,N~3~-bis(4-chlorophenyl)-N~2~-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2,3-dicarboxamide" W1L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-~{N}3,~{N}3-bis(4-chlorophenyl)-6,6-dimethyl-~{N}2-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3-azabicyclo[3.1.0]hexane-2,3-dicarboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W1L "Create component" 2023-09-21 RCSB W1L "Initial release" 2024-09-25 RCSB #