data_W3J # _chem_comp.id W3J _chem_comp.name "1,4,5,6-tetrahydropyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C4 H9 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-24 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 99.134 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W3J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RRY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W3J N1 N1 N 0 1 N N N 6.616 22.606 18.059 0.297 -1.173 -0.046 N1 W3J 1 W3J N N2 N 0 1 N N N 4.923 21.190 17.609 2.326 0.047 -0.058 N W3J 2 W3J C C1 C 0 1 N N N 5.550 22.273 17.299 0.952 0.036 -0.009 C W3J 3 W3J N2 N3 N 0 1 N N N 5.204 23.069 16.273 0.321 1.161 0.069 N2 W3J 4 W3J C3 C2 C 0 1 N N N 5.899 24.318 15.956 -1.131 1.272 0.147 C3 W3J 5 W3J C2 C3 C 0 1 N N N 7.356 24.205 16.371 -1.797 0.000 -0.381 C2 W3J 6 W3J C1 C4 C 0 1 N N N 7.460 23.782 17.816 -1.135 -1.210 0.287 C1 W3J 7 W3J H1 H1 H 0 1 N N N 6.844 22.016 18.834 0.770 -1.984 -0.290 H1 W3J 8 W3J H2 H2 H 0 1 N N N 4.130 20.901 17.073 2.816 -0.788 -0.117 H2 W3J 9 W3J H3 H3 H 0 1 N N N 5.230 20.639 18.385 2.805 0.890 -0.033 H3 W3J 10 W3J H4 H4 H 0 1 N N N 5.839 24.507 14.874 -1.424 1.428 1.185 H4 W3J 11 W3J H5 H5 H 0 1 N N N 5.426 25.149 16.500 -1.459 2.124 -0.449 H5 W3J 12 W3J H6 H6 H 0 1 N N N 7.856 23.458 15.738 -2.860 0.016 -0.140 H6 W3J 13 W3J H7 H7 H 0 1 N N N 7.846 25.181 16.243 -1.664 -0.062 -1.461 H7 W3J 14 W3J H8 H8 H 0 1 N N N 8.506 23.533 18.048 -1.582 -2.131 -0.090 H8 W3J 15 W3J H9 H9 H 0 1 N N N 7.128 24.608 18.462 -1.261 -1.152 1.368 H9 W3J 16 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W3J C3 N2 SING N N 1 W3J C3 C2 SING N N 2 W3J N2 C DOUB N N 3 W3J C2 C1 SING N N 4 W3J C N SING N N 5 W3J C N1 SING N N 6 W3J C1 N1 SING N N 7 W3J N1 H1 SING N N 8 W3J N H2 SING N N 9 W3J N H3 SING N N 10 W3J C3 H4 SING N N 11 W3J C3 H5 SING N N 12 W3J C2 H6 SING N N 13 W3J C2 H7 SING N N 14 W3J C1 H8 SING N N 15 W3J C1 H9 SING N N 16 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W3J SMILES ACDLabs 12.01 "N1C(N)=NCCC1" W3J InChI InChI 1.03 "InChI=1S/C4H9N3/c5-4-6-2-1-3-7-4/h1-3H2,(H3,5,6,7)" W3J InChIKey InChI 1.03 PEHDFSFYZKSKGH-UHFFFAOYSA-N W3J SMILES_CANONICAL CACTVS 3.385 NC1=NCCCN1 W3J SMILES CACTVS 3.385 NC1=NCCCN1 W3J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CNC(=NC1)N" W3J SMILES "OpenEye OEToolkits" 2.0.7 "C1CNC(=NC1)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W3J "SYSTEMATIC NAME" ACDLabs 12.01 "1,4,5,6-tetrahydropyrimidin-2-amine" W3J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1,4,5,6-tetrahydropyrimidin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W3J "Create component" 2020-09-24 RCSB W3J "Initial release" 2021-01-13 RCSB ##