data_W3R # _chem_comp.id W3R _chem_comp.name "5-(1H-indazol-7-yl)-1-[(1S)-1-phenylethyl]pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H16 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-04-26 _chem_comp.pdbx_modified_date 2023-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 332.356 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W3R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OUV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W3R C1 C1 C 0 1 N N S -15.658 0.599 -38.953 2.879 0.814 0.693 C1 W3R 1 W3R C2 C2 C 0 1 Y N N -17.128 0.492 -38.555 3.141 -0.593 0.221 C2 W3R 2 W3R C3 C3 C 0 1 Y N N -17.873 -0.642 -38.860 2.650 -1.016 -1.000 C3 W3R 3 W3R C7 C4 C 0 1 Y N N -17.751 1.530 -37.869 3.879 -1.459 1.007 C7 W3R 4 W3R C8 C5 C 0 1 N N N -14.543 2.492 -37.775 0.446 0.586 0.648 C8 W3R 5 W3R C9 C6 C 0 1 N N N -14.137 3.779 -37.650 -0.782 0.988 0.212 C9 W3R 6 W3R C10 C7 C 0 1 N N N -14.439 4.703 -38.743 -0.854 2.128 -0.713 C10 W3R 7 W3R C11 C8 C 0 1 N N N -15.533 2.826 -39.933 1.476 2.292 -0.619 C11 W3R 8 W3R C12 C9 C 0 1 Y N N -13.413 4.208 -36.424 -2.012 0.294 0.659 C12 W3R 9 W3R C13 C10 C 0 1 Y N N -12.401 3.393 -35.904 -2.503 0.497 1.941 C13 W3R 10 W3R C14 C11 C 0 1 Y N N -11.712 3.746 -34.746 -3.655 -0.151 2.364 C14 W3R 11 W3R C15 C12 C 0 1 Y N N -12.010 4.922 -34.072 -4.326 -0.999 1.532 C15 W3R 12 W3R C16 C13 C 0 1 Y N N -13.021 5.763 -34.551 -3.855 -1.225 0.230 C16 W3R 13 W3R O1 O1 O 0 1 N N N -16.138 2.419 -40.918 2.496 2.849 -0.976 O1 W3R 14 W3R N N1 N 0 1 N N N -15.215 2.009 -38.874 1.562 1.249 0.222 N W3R 15 W3R C6 C14 C 0 1 Y N N -19.089 1.439 -37.504 4.119 -2.750 0.574 C6 W3R 16 W3R C5 C15 C 0 1 Y N N -19.817 0.309 -37.816 3.623 -3.174 -0.644 C5 W3R 17 W3R C4 C16 C 0 1 Y N N -19.210 -0.731 -38.493 2.891 -2.306 -1.433 C4 W3R 18 W3R C C17 C 0 1 N N N -14.755 -0.314 -38.130 2.912 0.854 2.222 C W3R 19 W3R N1 N2 N 0 1 N N N -15.122 4.134 -39.805 0.294 2.727 -1.092 N1 W3R 20 W3R O O2 O 0 1 N N N -14.136 5.900 -38.781 -1.927 2.523 -1.129 O W3R 21 W3R C17 C18 C 0 1 Y N N -13.714 5.392 -35.723 -2.693 -0.570 -0.212 C17 W3R 22 W3R N2 N3 N 0 1 Y N N -14.622 6.368 -35.959 -2.483 -0.972 -1.505 N2 W3R 23 W3R N3 N4 N 0 1 Y N N -14.563 7.352 -35.012 -3.507 -1.859 -1.857 N3 W3R 24 W3R C18 C19 C 0 1 Y N N -13.611 6.995 -34.169 -4.312 -2.024 -0.846 C18 W3R 25 W3R H1 H1 H 0 1 N N N -15.579 0.279 -40.002 3.645 1.479 0.295 H1 W3R 26 W3R H2 H2 H 0 1 N N N -17.408 -1.462 -39.387 2.077 -0.338 -1.615 H2 W3R 27 W3R H3 H3 H 0 1 N N N -17.188 2.417 -37.617 4.267 -1.127 1.958 H3 W3R 28 W3R H4 H4 H 0 1 N N N -14.327 1.808 -36.968 0.536 -0.248 1.328 H4 W3R 29 W3R H5 H5 H 0 1 N N N -12.149 2.473 -36.410 -1.985 1.164 2.615 H5 W3R 30 W3R H6 H6 H 0 1 N N N -10.936 3.097 -34.368 -4.024 0.016 3.365 H6 W3R 31 W3R H7 H7 H 0 1 N N N -11.463 5.188 -33.180 -5.221 -1.496 1.876 H7 W3R 32 W3R H8 H8 H 0 1 N N N -19.560 2.254 -36.975 4.696 -3.426 1.188 H8 W3R 33 W3R H9 H9 H 0 1 N N N -20.857 0.238 -37.532 3.811 -4.182 -0.983 H9 W3R 34 W3R H10 H10 H 0 1 N N N -19.777 -1.617 -38.738 2.506 -2.637 -2.386 H10 W3R 35 W3R H11 H11 H 0 1 N N N -15.111 -1.352 -38.210 2.146 0.188 2.620 H11 W3R 36 W3R H12 H12 H 0 1 N N N -13.725 -0.250 -38.510 3.892 0.530 2.572 H12 W3R 37 W3R H13 H13 H 0 1 N N N -14.778 0.001 -37.076 2.723 1.872 2.563 H13 W3R 38 W3R H14 H14 H 0 1 N N N -15.342 4.743 -40.567 0.266 3.484 -1.699 H14 W3R 39 W3R H15 H15 H 0 1 N N N -15.258 6.369 -36.731 -1.753 -0.690 -2.077 H15 W3R 40 W3R H16 H16 H 0 1 N N N -13.319 7.567 -33.301 -5.188 -2.655 -0.836 H16 W3R 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W3R O1 C11 DOUB N N 1 W3R C11 N1 SING N N 2 W3R C11 N SING N N 3 W3R N1 C10 SING N N 4 W3R C1 N SING N N 5 W3R C1 C2 SING N N 6 W3R C1 C SING N N 7 W3R N C8 SING N N 8 W3R C3 C2 DOUB Y N 9 W3R C3 C4 SING Y N 10 W3R O C10 DOUB N N 11 W3R C10 C9 SING N N 12 W3R C2 C7 SING Y N 13 W3R C4 C5 DOUB Y N 14 W3R C7 C6 DOUB Y N 15 W3R C5 C6 SING Y N 16 W3R C8 C9 DOUB N N 17 W3R C9 C12 SING N N 18 W3R C12 C13 DOUB Y N 19 W3R C12 C17 SING Y N 20 W3R N2 C17 SING Y N 21 W3R N2 N3 SING Y N 22 W3R C13 C14 SING Y N 23 W3R C17 C16 DOUB Y N 24 W3R N3 C18 DOUB Y N 25 W3R C14 C15 DOUB Y N 26 W3R C16 C18 SING Y N 27 W3R C16 C15 SING Y N 28 W3R C1 H1 SING N N 29 W3R C3 H2 SING N N 30 W3R C7 H3 SING N N 31 W3R C8 H4 SING N N 32 W3R C13 H5 SING N N 33 W3R C14 H6 SING N N 34 W3R C15 H7 SING N N 35 W3R C6 H8 SING N N 36 W3R C5 H9 SING N N 37 W3R C4 H10 SING N N 38 W3R C H11 SING N N 39 W3R C H12 SING N N 40 W3R C H13 SING N N 41 W3R N1 H14 SING N N 42 W3R N2 H15 SING N N 43 W3R C18 H16 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W3R InChI InChI 1.06 "InChI=1S/C19H16N4O2/c1-12(13-6-3-2-4-7-13)23-11-16(18(24)21-19(23)25)15-9-5-8-14-10-20-22-17(14)15/h2-12H,1H3,(H,20,22)(H,21,24,25)/t12-/m0/s1" W3R InChIKey InChI 1.06 NGIUEWQDJPVTOK-LBPRGKRZSA-N W3R SMILES_CANONICAL CACTVS 3.385 "C[C@H](N1C=C(C(=O)NC1=O)c2cccc3cn[nH]c23)c4ccccc4" W3R SMILES CACTVS 3.385 "C[CH](N1C=C(C(=O)NC1=O)c2cccc3cn[nH]c23)c4ccccc4" W3R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1ccccc1)N2C=C(C(=O)NC2=O)c3cccc4c3[nH]nc4" W3R SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ccccc1)N2C=C(C(=O)NC2=O)c3cccc4c3[nH]nc4" # _pdbx_chem_comp_identifier.comp_id W3R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-(1~{H}-indazol-7-yl)-1-[(1~{S})-1-phenylethyl]pyrimidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W3R "Create component" 2023-04-26 PDBE W3R "Initial release" 2023-07-05 RCSB #