data_W40 # _chem_comp.id W40 _chem_comp.name "5-[3,5-bis(fluoranyl)phenyl]-1-[(1S)-1-phenylethyl]pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H14 F2 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-04-26 _chem_comp.pdbx_modified_date 2023-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 328.313 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W40 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OW3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W40 C1 C1 C 0 1 N N S -13.721 5.674 1.503 2.758 -0.816 -0.981 C1 W40 1 W40 C2 C2 C 0 1 Y N N -13.771 5.873 3.012 3.218 0.489 -0.383 C2 W40 2 W40 C3 C3 C 0 1 Y N N -14.143 7.095 3.565 2.985 0.757 0.953 C3 W40 3 W40 C7 C4 C 0 1 Y N N -13.447 4.833 3.869 3.879 1.415 -1.168 C7 W40 4 W40 C8 C5 C 0 1 N N N -13.878 7.893 0.386 0.396 -0.474 -0.461 C8 W40 5 W40 C9 C6 C 0 1 N N N -14.524 8.901 -0.242 -0.762 -0.869 0.140 C9 W40 6 W40 C10 C7 C 0 1 N N N -15.959 8.754 -0.484 -0.755 -2.118 0.913 C10 W40 7 W40 C11 C8 C 0 1 N N N -15.844 6.532 0.611 1.507 -2.378 0.386 C11 W40 8 W40 C12 C9 C 0 1 Y N N -13.789 10.120 -0.660 -1.998 -0.059 0.017 C12 W40 9 W40 C13 C10 C 0 1 Y N N -14.294 11.384 -0.363 -3.107 -0.573 -0.653 C13 W40 10 W40 C14 C11 C 0 1 Y N N -13.577 12.486 -0.762 -4.257 0.186 -0.765 C14 W40 11 W40 C15 C12 C 0 1 Y N N -12.384 12.415 -1.433 -4.308 1.456 -0.214 C15 W40 12 W40 C16 C13 C 0 1 Y N N -11.920 11.154 -1.700 -3.208 1.971 0.452 C16 W40 13 W40 N N1 N 0 1 N N N -14.495 6.735 0.807 1.517 -1.241 -0.329 N W40 14 W40 C C14 C 0 1 N N N -12.289 5.593 0.979 2.509 -0.630 -2.479 C W40 15 W40 O O1 O 0 1 N N N -16.679 9.585 -1.041 -1.765 -2.512 1.467 O W40 16 W40 N1 N2 N 0 1 N N N -16.499 7.561 -0.029 0.394 -2.821 0.997 N1 W40 17 W40 O1 O2 O 0 1 N N N -16.426 5.518 0.973 2.529 -3.030 0.475 O1 W40 18 W40 C4 C15 C 0 1 Y N N -14.186 7.266 4.936 3.407 1.953 1.502 C4 W40 19 W40 C5 C16 C 0 1 Y N N -13.861 6.224 5.775 4.063 2.882 0.715 C5 W40 20 W40 C6 C17 C 0 1 Y N N -13.493 5.009 5.242 4.301 2.611 -0.620 C6 W40 21 W40 C17 C18 C 0 1 Y N N -12.578 10.004 -1.335 -2.056 1.217 0.575 C17 W40 22 W40 F F1 F 0 1 N N N -10.742 11.038 -2.363 -3.263 3.211 0.987 F W40 23 W40 F1 F2 F 0 1 N N N -14.072 13.719 -0.477 -5.333 -0.311 -1.414 F1 W40 24 W40 H1 H1 H 0 1 N N N -14.203 4.710 1.284 3.526 -1.575 -0.832 H1 W40 25 W40 H2 H2 H 0 1 N N N -14.401 7.919 2.916 2.473 0.032 1.568 H2 W40 26 W40 H3 H3 H 0 1 N N N -13.156 3.876 3.462 4.065 1.204 -2.211 H3 W40 27 W40 H4 H4 H 0 1 N N N -12.819 8.001 0.568 0.424 0.437 -1.041 H4 W40 28 W40 H5 H5 H 0 1 N N N -15.228 11.495 0.169 -3.068 -1.562 -1.084 H5 W40 29 W40 H6 H6 H 0 1 N N N -11.842 13.300 -1.733 -5.208 2.047 -0.304 H6 W40 30 W40 H7 H7 H 0 1 N N N -11.746 4.800 1.514 2.177 -1.573 -2.912 H7 W40 31 W40 H8 H8 H 0 1 N N N -12.305 5.364 -0.097 1.742 0.129 -2.629 H8 W40 32 W40 H9 H9 H 0 1 N N N -11.784 6.557 1.142 3.433 -0.313 -2.964 H9 W40 33 W40 H10 H10 H 0 1 N N N -17.479 7.432 -0.183 0.418 -3.648 1.503 H10 W40 34 W40 H11 H11 H 0 1 N N N -14.476 8.220 5.350 3.224 2.163 2.546 H11 W40 35 W40 H12 H12 H 0 1 N N N -13.895 6.359 6.846 4.392 3.816 1.144 H12 W40 36 W40 H13 H13 H 0 1 N N N -13.239 4.189 5.898 4.817 3.335 -1.233 H13 W40 37 W40 H14 H14 H 0 1 N N N -12.165 9.033 -1.567 -1.199 1.619 1.095 H14 W40 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W40 F C16 SING N N 1 W40 C16 C15 DOUB Y N 2 W40 C16 C17 SING Y N 3 W40 C15 C14 SING Y N 4 W40 C17 C12 DOUB Y N 5 W40 O C10 DOUB N N 6 W40 C14 F1 SING N N 7 W40 C14 C13 DOUB Y N 8 W40 C12 C13 SING Y N 9 W40 C12 C9 SING N N 10 W40 C10 C9 SING N N 11 W40 C10 N1 SING N N 12 W40 C9 C8 DOUB N N 13 W40 N1 C11 SING N N 14 W40 C8 N SING N N 15 W40 C11 N SING N N 16 W40 C11 O1 DOUB N N 17 W40 N C1 SING N N 18 W40 C C1 SING N N 19 W40 C1 C2 SING N N 20 W40 C2 C3 DOUB Y N 21 W40 C2 C7 SING Y N 22 W40 C3 C4 SING Y N 23 W40 C7 C6 DOUB Y N 24 W40 C4 C5 DOUB Y N 25 W40 C6 C5 SING Y N 26 W40 C1 H1 SING N N 27 W40 C3 H2 SING N N 28 W40 C7 H3 SING N N 29 W40 C8 H4 SING N N 30 W40 C13 H5 SING N N 31 W40 C15 H6 SING N N 32 W40 C H7 SING N N 33 W40 C H8 SING N N 34 W40 C H9 SING N N 35 W40 N1 H10 SING N N 36 W40 C4 H11 SING N N 37 W40 C5 H12 SING N N 38 W40 C6 H13 SING N N 39 W40 C17 H14 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W40 InChI InChI 1.06 "InChI=1S/C18H14F2N2O2/c1-11(12-5-3-2-4-6-12)22-10-16(17(23)21-18(22)24)13-7-14(19)9-15(20)8-13/h2-11H,1H3,(H,21,23,24)/t11-/m0/s1" W40 InChIKey InChI 1.06 PDFBJEYJDVRNBX-NSHDSACASA-N W40 SMILES_CANONICAL CACTVS 3.385 "C[C@H](N1C=C(C(=O)NC1=O)c2cc(F)cc(F)c2)c3ccccc3" W40 SMILES CACTVS 3.385 "C[CH](N1C=C(C(=O)NC1=O)c2cc(F)cc(F)c2)c3ccccc3" W40 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1ccccc1)N2C=C(C(=O)NC2=O)c3cc(cc(c3)F)F" W40 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ccccc1)N2C=C(C(=O)NC2=O)c3cc(cc(c3)F)F" # _pdbx_chem_comp_identifier.comp_id W40 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-[3,5-bis(fluoranyl)phenyl]-1-[(1~{S})-1-phenylethyl]pyrimidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W40 "Create component" 2023-04-26 PDBE W40 "Initial release" 2023-07-05 RCSB #