data_W48
#
_chem_comp.id W48
_chem_comp.name "(1S,2S)-2-[(N-{[(3-chlorophenyl)methoxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-[(3R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl]propane-1-sulfonic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H32 Cl N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-01-19
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 558.044
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code W48
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7TIV
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
W48 C2 C1 C 0 1 N N N N N N 8.742 1.121 21.921 1.164 0.510 -0.532 C2 W48 1
W48 C4 C2 C 0 1 N N S N N N 8.658 2.187 19.735 3.472 1.230 -0.841 C4 W48 2
W48 C5 C3 C 0 1 N N N N N N 8.102 1.399 18.542 4.697 1.329 0.071 C5 W48 3
W48 C10 C4 C 0 1 N N N N N N 7.824 -0.931 17.611 5.479 2.071 2.331 C10 W48 4
W48 C6 C5 C 0 1 N N R N N N 8.452 -0.119 18.691 4.317 2.065 1.357 C6 W48 5
W48 C7 C6 C 0 1 N N N N N N 9.941 -0.282 18.618 4.077 3.535 1.079 C7 W48 6
W48 C12 C7 C 0 1 N N S N N N 8.343 3.674 19.565 3.885 0.636 -2.188 C12 W48 7
W48 N3 N1 N 0 1 N N N N N N 8.035 1.725 20.965 2.466 0.367 -0.215 N3 W48 8
W48 C14 C8 C 0 1 N N S N N N 8.038 0.651 23.202 0.130 -0.377 0.112 C14 W48 9
W48 C15 C9 C 0 1 N N N N N N 8.242 1.733 24.268 0.433 -1.839 -0.222 C15 W48 10
W48 C8 C10 C 0 1 N N N N N N 10.155 -1.420 17.561 4.964 4.202 1.787 C8 W48 11
W48 O1 O1 O 0 1 N N N N N N 9.925 0.949 21.779 0.824 1.357 -1.331 O1 W48 12
W48 C19 C11 C 0 1 N N N N N N 5.589 2.007 27.730 -1.052 -4.977 2.361 C19 W48 13
W48 C16 C12 C 0 1 N N N N N N 7.576 1.389 25.612 -0.541 -2.747 0.531 C16 W48 14
W48 C20 C13 C 0 1 N N N N N N 5.397 0.838 26.764 -1.272 -3.525 2.790 C20 W48 15
W48 C17 C14 C 0 1 N N N N N N 7.786 2.566 26.572 -0.320 -4.199 0.102 C17 W48 16
W48 C18 C15 C 0 1 N N N N N N 7.061 2.383 27.916 -1.294 -5.107 0.856 C18 W48 17
W48 C21 C16 C 0 1 N N N N N N 6.078 1.123 25.425 -0.298 -2.617 2.036 C21 W48 18
W48 C23 C17 C 0 1 N N N N N N 8.561 -1.752 22.968 -2.294 -0.287 0.346 C23 W48 19
W48 C25 C18 C 0 1 N N N N N N 9.169 -3.992 22.743 -4.649 -0.275 0.732 C25 W48 20
W48 C26 C19 C 0 1 Y N N N N N 10.230 -3.990 21.640 -5.922 0.155 0.051 C26 W48 21
W48 C27 C20 C 0 1 Y N N N N N 10.312 -5.063 20.750 -6.595 -0.725 -0.775 C27 W48 22
W48 C28 C21 C 0 1 Y N N N N N 11.273 -5.059 19.738 -7.764 -0.332 -1.401 C28 W48 23
W48 C29 C22 C 0 1 Y N N N N N 12.151 -3.986 19.613 -8.259 0.943 -1.201 C29 W48 24
W48 C30 C23 C 0 1 Y N N N N N 12.066 -2.916 20.508 -7.585 1.825 -0.375 C30 W48 25
W48 C31 C24 C 0 1 Y N N N N N 11.115 -2.921 21.513 -6.419 1.429 0.255 C31 W48 26
W48 CL CL1 CL 0 0 N N N N N N 13.118 -1.588 20.382 -8.207 3.427 -0.124 CL W48 27
W48 N22 N2 N 0 1 N N N N N N 8.614 -0.604 23.653 -1.199 -0.025 -0.395 N22 W48 28
W48 N9 N3 N 0 1 N N N N N N 8.754 -1.662 16.984 5.788 3.369 2.522 N9 W48 29
W48 O11 O2 O 0 1 N N N N N N 6.649 -0.943 17.352 6.016 1.108 2.836 O11 W48 30
W48 O13 O3 O 0 1 N N N N N N 8.836 4.316 18.672 4.944 1.416 -2.748 O13 W48 31
W48 O24 O4 O 0 1 N N N N N N 9.196 -2.796 23.482 -3.515 0.036 -0.119 O24 W48 32
W48 O32 O5 O 0 1 N N N N N N 7.989 -1.842 21.924 -2.179 -0.814 1.435 O32 W48 33
W48 H1 H1 H 0 1 N N N N N N 9.748 2.050 19.784 3.052 2.224 -0.995 H1 W48 34
W48 H2 H2 H 0 1 N N N N N N 8.545 1.785 17.612 5.049 0.327 0.316 H2 W48 35
W48 H3 H3 H 0 1 N N N N N N 7.009 1.519 18.504 5.487 1.877 -0.442 H3 W48 36
W48 H4 H4 H 0 1 N N N N N N 8.093 -0.468 19.671 3.438 1.610 1.812 H4 W48 37
W48 H5 H5 H 0 1 N N N N N N 10.695 0.261 19.169 3.325 3.954 0.426 H5 W48 38
W48 H6 H6 H 0 1 N N N N N N 7.358 3.956 19.966 3.032 0.642 -2.866 H6 W48 39
W48 H7 H7 H 0 1 N N N N N N 7.053 1.863 21.097 2.738 -0.307 0.428 H7 W48 40
W48 H8 H8 H 0 1 N N N N N N 6.963 0.532 23.004 0.155 -0.239 1.193 H8 W48 41
W48 H9 H9 H 0 1 N N N N N N 9.322 1.861 24.435 0.321 -1.997 -1.295 H9 W48 42
W48 H10 H10 H 0 1 N N N N N N 7.814 2.676 23.896 1.455 -2.075 0.075 H10 W48 43
W48 H11 H11 H 0 1 N N N N N N 11.076 -1.919 17.299 5.039 5.279 1.794 H11 W48 44
W48 H12 H12 H 0 1 N N N N N N 5.049 2.881 27.337 -0.028 -5.272 2.591 H12 W48 45
W48 H13 H13 H 0 1 N N N N N N 5.171 1.728 28.708 -1.746 -5.624 2.898 H13 W48 46
W48 H14 H14 H 0 1 N N N N N N 8.053 0.491 26.031 -1.565 -2.451 0.302 H14 W48 47
W48 H15 H15 H 0 1 N N N N N N 4.321 0.682 26.596 -2.296 -3.230 2.560 H15 W48 48
W48 H16 H16 H 0 1 N N N N N N 5.834 -0.070 27.205 -1.099 -3.433 3.862 H16 W48 49
W48 H17 H17 H 0 1 N N N N N N 8.863 2.671 26.767 -0.493 -4.291 -0.970 H17 W48 50
W48 H18 H18 H 0 1 N N N N N N 7.409 3.481 26.092 0.703 -4.494 0.332 H18 W48 51
W48 H19 H19 H 0 1 N N N N N N 7.562 1.585 28.483 -1.137 -6.141 0.551 H19 W48 52
W48 H20 H20 H 0 1 N N N N N N 7.118 3.325 28.481 -2.318 -4.812 0.626 H20 W48 53
W48 H21 H21 H 0 1 N N N N N N 5.611 2.007 24.966 0.725 -2.912 2.266 H21 W48 54
W48 H22 H22 H 0 1 N N N N N N 5.948 0.254 24.764 -0.456 -1.583 2.342 H22 W48 55
W48 H23 H23 H 0 1 N N N N N N 8.176 -4.107 22.284 -4.547 0.254 1.680 H23 W48 56
W48 H24 H24 H 0 1 N N N N N N 9.360 -4.837 23.422 -4.681 -1.349 0.917 H24 W48 57
W48 H25 H25 H 0 1 N N N N N N 9.631 -5.896 20.845 -6.208 -1.722 -0.932 H25 W48 58
W48 H26 H26 H 0 1 N N N N N N 11.336 -5.890 19.051 -8.290 -1.020 -2.045 H26 W48 59
W48 H27 H27 H 0 1 N N N N N N 12.894 -3.980 18.829 -9.171 1.251 -1.690 H27 W48 60
W48 H28 H28 H 0 1 N N N N N N 11.058 -2.092 22.203 -5.893 2.117 0.900 H28 W48 61
W48 H29 H29 H 0 1 N N N N N N 9.082 -0.610 24.536 -1.291 0.396 -1.264 H29 W48 62
W48 H30 H30 H 0 1 N N N N N N 8.559 -2.290 16.231 6.500 3.680 3.102 H30 W48 63
W48 S1 S1 S 0 1 N Y N N N N ? ? ? 4.453 -1.070 -1.949 S1 W48 64
W48 O2 O6 O 0 1 N Y N N N N ? ? ? 4.535 -1.749 -3.195 O2 W48 65
W48 O4 O7 O 0 1 N Y N N N N ? ? ? 5.528 -1.112 -1.020 O4 W48 66
W48 O3 O8 O 0 1 N Y N N N N ? ? ? 3.304 -1.755 -1.223 O3 W48 67
W48 H31 H31 H 0 1 N N N N N N 8.530 5.214 18.721 4.711 2.341 -2.904 H31 W48 68
W48 H32 H32 H 0 1 N Y N N N N ? ? ? 3.464 -2.687 -1.024 H32 W48 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
W48 N9 C8 SING N N 1
W48 N9 C10 SING N N 2
W48 O11 C10 DOUB N N 3
W48 C8 C7 DOUB N N 4
W48 C10 C6 SING N N 5
W48 C5 C6 SING N N 6
W48 C5 C4 SING N N 7
W48 C7 C6 SING N N 8
W48 O13 C12 SING N N 9
W48 C12 C4 SING N N 10
W48 C29 C28 DOUB Y N 11
W48 C29 C30 SING Y N 12
W48 C4 N3 SING N N 13
W48 C28 C27 SING Y N 14
W48 CL C30 SING N N 15
W48 C30 C31 DOUB Y N 16
W48 C27 C26 DOUB Y N 17
W48 N3 C2 SING N N 18
W48 C31 C26 SING Y N 19
W48 C26 C25 SING N N 20
W48 O1 C2 DOUB N N 21
W48 C2 C14 SING N N 22
W48 O32 C23 DOUB N N 23
W48 C25 O24 SING N N 24
W48 C23 O24 SING N N 25
W48 C23 N22 SING N N 26
W48 C14 N22 SING N N 27
W48 C14 C15 SING N N 28
W48 C15 C16 SING N N 29
W48 C21 C16 SING N N 30
W48 C21 C20 SING N N 31
W48 C16 C17 SING N N 32
W48 C17 C18 SING N N 33
W48 C20 C19 SING N N 34
W48 C19 C18 SING N N 35
W48 C4 H1 SING N N 36
W48 C5 H2 SING N N 37
W48 C5 H3 SING N N 38
W48 C6 H4 SING N N 39
W48 C7 H5 SING N N 40
W48 C12 H6 SING N N 41
W48 N3 H7 SING N N 42
W48 C14 H8 SING N N 43
W48 C15 H9 SING N N 44
W48 C15 H10 SING N N 45
W48 C8 H11 SING N N 46
W48 C19 H12 SING N N 47
W48 C19 H13 SING N N 48
W48 C16 H14 SING N N 49
W48 C20 H15 SING N N 50
W48 C20 H16 SING N N 51
W48 C17 H17 SING N N 52
W48 C17 H18 SING N N 53
W48 C18 H19 SING N N 54
W48 C18 H20 SING N N 55
W48 C21 H21 SING N N 56
W48 C21 H22 SING N N 57
W48 C25 H23 SING N N 58
W48 C25 H24 SING N N 59
W48 C27 H25 SING N N 60
W48 C28 H26 SING N N 61
W48 C29 H27 SING N N 62
W48 C31 H28 SING N N 63
W48 N22 H29 SING N N 64
W48 N9 H30 SING N N 65
W48 C12 S1 SING N N 66
W48 S1 O2 DOUB N N 67
W48 S1 O4 DOUB N N 68
W48 S1 O3 SING N N 69
W48 O13 H31 SING N N 70
W48 O3 H32 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
W48 SMILES ACDLabs 12.01 "O=C1NC=CC1CC(NC(=O)C(CC1CCCCC1)NC(=O)OCc1cccc(Cl)c1)C(O)S(=O)(=O)O"
W48 InChI InChI 1.03 "InChI=1S/C24H32ClN3O8S/c25-18-8-4-7-16(11-18)14-36-24(32)28-19(12-15-5-2-1-3-6-15)22(30)27-20(23(31)37(33,34)35)13-17-9-10-26-21(17)29/h4,7-11,15,17,19-20,23,31H,1-3,5-6,12-14H2,(H,26,29)(H,27,30)(H,28,32)(H,33,34,35)/t17-,19-,20-,23-/m0/s1"
W48 InChIKey InChI 1.03 DXPXOBKGTKNZHP-UDSSINMLSA-N
W48 SMILES_CANONICAL CACTVS 3.385 "O[C@H]([C@H](C[C@@H]1C=CNC1=O)NC(=O)[C@H](CC2CCCCC2)NC(=O)OCc3cccc(Cl)c3)[S](O)(=O)=O"
W48 SMILES CACTVS 3.385 "O[CH]([CH](C[CH]1C=CNC1=O)NC(=O)[CH](CC2CCCCC2)NC(=O)OCc3cccc(Cl)c3)[S](O)(=O)=O"
W48 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Cl)COC(=O)N[C@@H](CC2CCCCC2)C(=O)N[C@@H](C[C@@H]3C=CNC3=O)[C@H](O)S(=O)(=O)O"
W48 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Cl)COC(=O)NC(CC2CCCCC2)C(=O)NC(CC3C=CNC3=O)C(O)S(=O)(=O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
W48 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-2-[(N-{[(3-chlorophenyl)methoxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-[(3R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl]propane-1-sulfonic acid"
W48 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-2-[(3-chlorophenyl)methoxycarbonylamino]-3-cyclohexyl-propanoyl]amino]-1-oxidanyl-3-[(3~{R})-2-oxidanylidene-1,3-dihydropyrrol-3-yl]propane-1-sulfonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
W48 "Create component" 2022-01-19 RCSB
W48 "Initial release" 2022-05-04 RCSB
W48 "Modify PCM" 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id W48
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category "Covalent chemical modification"
_pdbx_chem_comp_pcm.position "Amino-acid side chain"
_pdbx_chem_comp_pcm.polypeptide_position "Any position"
_pdbx_chem_comp_pcm.comp_id_linking_atom C12
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#