data_W5F # _chem_comp.id W5F _chem_comp.name ALX5407 _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H24 F N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-[[(3~{R})-3-(4-fluorophenyl)-3-(4-phenylphenoxy)propyl]-methyl-amino]ethanoic acid; ALX-5407; (R)-NFPS" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-20 _chem_comp.pdbx_modified_date 2024-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 393.451 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W5F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8WFJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W5F C06 C1 C 0 1 N N N N N N 97.679 103.248 101.691 -2.633 0.505 0.105 C06 W5F 1 W5F C07 C2 C 0 1 N N R N N N 96.520 103.298 102.684 -1.121 0.711 0.213 C07 W5F 2 W5F C08 C3 C 0 1 N N N N N N 98.989 103.022 102.440 -2.967 -0.965 0.368 C08 W5F 3 W5F C09 C4 C 0 1 Y N N N N N 96.751 104.436 103.678 -0.803 2.178 0.076 C09 W5F 4 W5F C10 C5 C 0 1 N N N N N N 101.003 104.186 101.990 -4.757 -2.593 0.275 C10 W5F 5 W5F C11 C6 C 0 1 N N N N N N 100.808 101.907 101.419 -5.126 -0.448 1.335 C11 W5F 6 W5F C12 C7 C 0 1 Y N N N N N 96.777 104.182 105.039 -0.556 2.939 1.203 C12 W5F 7 W5F C13 C8 C 0 1 Y N N N N N 96.933 105.728 103.214 -0.754 2.760 -1.177 C13 W5F 8 W5F C14 C9 C 0 1 Y N N N N N 95.109 101.669 103.615 0.828 -0.373 -0.611 C14 W5F 9 W5F C15 C10 C 0 1 Y N N N N N 96.984 105.219 105.933 -0.265 4.284 1.079 C15 W5F 10 W5F C16 C11 C 0 1 Y N N N N N 97.141 106.763 104.108 -0.462 4.105 -1.304 C16 W5F 11 W5F C17 C12 C 0 1 Y N N N N N 94.738 101.320 104.901 1.487 -1.180 -1.528 C17 W5F 12 W5F C18 C13 C 0 1 Y N N N N N 94.177 101.624 102.593 1.489 0.075 0.525 C18 W5F 13 W5F C19 C14 C 0 1 Y N N N N N 92.507 100.875 104.140 3.467 -1.090 -0.175 C19 W5F 14 W5F C20 C15 C 0 1 Y N N N N N 97.166 106.509 105.468 -0.221 4.870 -0.175 C20 W5F 15 W5F C21 C16 C 0 1 N N N N N N 102.166 104.312 101.009 -6.212 -2.767 -0.077 C21 W5F 16 W5F C22 C17 C 0 1 Y N N N N N 93.437 100.923 105.163 2.801 -1.539 -1.314 C22 W5F 17 W5F C23 C18 C 0 1 Y N N N N N 92.876 101.228 102.854 2.803 -0.280 0.744 C23 W5F 18 W5F C24 C19 C 0 1 Y N N N N N 91.075 100.442 104.435 4.881 -1.475 0.059 C24 W5F 19 W5F C25 C20 C 0 1 Y N N N N N 90.820 99.175 104.935 5.549 -1.027 1.198 C25 W5F 20 W5F C26 C21 C 0 1 Y N N N N N 90.028 101.318 104.202 5.545 -2.289 -0.856 C26 W5F 21 W5F C27 C22 C 0 1 Y N N N N N 89.518 98.785 105.202 6.864 -1.388 1.410 C27 W5F 22 W5F C28 C23 C 0 1 Y N N N N N 88.725 100.929 104.469 6.860 -2.644 -0.634 C28 W5F 23 W5F C29 C24 C 0 1 Y N N N N N 88.470 99.662 104.969 7.519 -2.192 0.495 C29 W5F 24 W5F F01 F1 F 0 1 N N N N N N 97.371 107.531 106.349 0.064 6.185 -0.298 F01 W5F 25 W5F N05 N1 N 0 1 N N N N N N 100.094 103.163 101.512 -4.419 -1.163 0.264 N05 W5F 26 W5F O02 O1 O 0 1 N N N N N N 96.424 102.072 103.353 -0.466 -0.017 -0.828 O02 W5F 27 W5F O03 O2 O 0 1 N N N N N N 103.344 104.114 101.403 -6.747 -3.997 -0.129 O03 W5F 28 W5F O04 O3 O 0 1 N N N N N N 101.945 104.612 99.807 -6.897 -1.800 -0.312 O04 W5F 29 W5F H1 H1 H 0 1 N N N N N N 97.731 104.200 101.142 -3.138 1.129 0.842 H1 W5F 30 W5F H2 H2 H 0 1 N N N N N N 97.517 102.424 100.981 -2.967 0.780 -0.895 H2 W5F 31 W5F H3 H3 H 0 1 N N N N N N 95.593 103.503 102.129 -0.773 0.353 1.181 H3 W5F 32 W5F H4 H4 H 0 1 N N N N N N 98.997 102.010 102.872 -2.462 -1.590 -0.369 H4 W5F 33 W5F H5 H5 H 0 1 N N N N N N 99.086 103.765 103.245 -2.633 -1.240 1.368 H5 W5F 34 W5F H6 H6 H 0 1 N N N N N N 101.386 103.905 102.982 -4.571 -3.003 1.267 H6 W5F 35 W5F H7 H7 H 0 1 N N N N N N 100.473 105.147 102.060 -4.141 -3.117 -0.456 H7 W5F 36 W5F H8 H8 H 0 1 N N N N N N 100.127 101.123 101.057 -4.843 -0.867 2.301 H8 W5F 37 W5F H9 H9 H 0 1 N N N N N N 101.649 102.014 100.718 -4.857 0.608 1.305 H9 W5F 38 W5F H10 H10 H 0 1 N N N N N N 101.192 101.629 102.412 -6.201 -0.553 1.194 H10 W5F 39 W5F H11 H11 H 0 1 N N N N N N 96.636 103.175 105.403 -0.591 2.482 2.181 H11 W5F 40 W5F H12 H12 H 0 1 N N N N N N 96.913 105.928 102.153 -0.942 2.163 -2.057 H12 W5F 41 W5F H13 H13 H 0 1 N N N N N N 97.003 105.020 106.994 -0.073 4.879 1.959 H13 W5F 42 W5F H14 H14 H 0 1 N N N N N N 97.284 107.770 103.744 -0.424 4.559 -2.283 H14 W5F 43 W5F H15 H15 H 0 1 N N N N N N 95.463 101.357 105.701 0.970 -1.527 -2.411 H15 W5F 44 W5F H16 H16 H 0 1 N N N N N N 94.465 101.899 101.589 0.973 0.702 1.237 H16 W5F 45 W5F H17 H17 H 0 1 N N N N N N 93.148 100.651 106.167 3.314 -2.167 -2.028 H17 W5F 46 W5F H18 H18 H 0 1 N N N N N N 92.150 101.195 102.055 3.317 0.069 1.628 H18 W5F 47 W5F H19 H19 H 0 1 N N N N N N 91.636 98.492 105.116 5.037 -0.399 1.912 H19 W5F 48 W5F H20 H20 H 0 1 N N N N N N 90.227 102.305 103.812 5.031 -2.643 -1.738 H20 W5F 49 W5F H21 H21 H 0 1 N N N N N N 89.319 97.798 105.592 7.382 -1.041 2.292 H21 W5F 50 W5F H22 H22 H 0 1 N N N N N N 87.909 101.613 104.288 7.376 -3.275 -1.342 H22 W5F 51 W5F H23 H23 H 0 1 N N N N N N 87.455 99.358 105.177 8.549 -2.471 0.665 H23 W5F 52 W5F H25 H25 H 0 1 N N N N N N 103.945 104.229 100.676 -7.685 -4.059 -0.359 H25 W5F 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W5F O04 C21 DOUB N N 1 W5F C21 O03 SING N N 2 W5F C21 C10 SING N N 3 W5F C11 N05 SING N N 4 W5F N05 C10 SING N N 5 W5F N05 C08 SING N N 6 W5F C06 C08 SING N N 7 W5F C06 C07 SING N N 8 W5F C18 C23 DOUB Y N 9 W5F C18 C14 SING Y N 10 W5F C07 O02 SING N N 11 W5F C07 C09 SING N N 12 W5F C23 C19 SING Y N 13 W5F C13 C09 DOUB Y N 14 W5F C13 C16 SING Y N 15 W5F O02 C14 SING N N 16 W5F C14 C17 DOUB Y N 17 W5F C09 C12 SING Y N 18 W5F C16 C20 DOUB Y N 19 W5F C19 C24 SING N N 20 W5F C19 C22 DOUB Y N 21 W5F C26 C24 DOUB Y N 22 W5F C26 C28 SING Y N 23 W5F C24 C25 SING Y N 24 W5F C28 C29 DOUB Y N 25 W5F C17 C22 SING Y N 26 W5F C25 C27 DOUB Y N 27 W5F C29 C27 SING Y N 28 W5F C12 C15 DOUB Y N 29 W5F C20 C15 SING Y N 30 W5F C20 F01 SING N N 31 W5F C06 H1 SING N N 32 W5F C06 H2 SING N N 33 W5F C07 H3 SING N N 34 W5F C08 H4 SING N N 35 W5F C08 H5 SING N N 36 W5F C10 H6 SING N N 37 W5F C10 H7 SING N N 38 W5F C11 H8 SING N N 39 W5F C11 H9 SING N N 40 W5F C11 H10 SING N N 41 W5F C12 H11 SING N N 42 W5F C13 H12 SING N N 43 W5F C15 H13 SING N N 44 W5F C16 H14 SING N N 45 W5F C17 H15 SING N N 46 W5F C18 H16 SING N N 47 W5F C22 H17 SING N N 48 W5F C23 H18 SING N N 49 W5F C25 H19 SING N N 50 W5F C26 H20 SING N N 51 W5F C27 H21 SING N N 52 W5F C28 H22 SING N N 53 W5F C29 H23 SING N N 54 W5F O03 H25 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W5F InChI InChI 1.06 "InChI=1S/C24H24FNO3/c1-26(17-24(27)28)16-15-23(20-7-11-21(25)12-8-20)29-22-13-9-19(10-14-22)18-5-3-2-4-6-18/h2-14,23H,15-17H2,1H3,(H,27,28)/t23-/m1/s1" W5F InChIKey InChI 1.06 FDORQEIHOKEJNX-HSZRJFAPSA-N W5F SMILES_CANONICAL CACTVS 3.385 "CN(CC[C@@H](Oc1ccc(cc1)c2ccccc2)c3ccc(F)cc3)CC(O)=O" W5F SMILES CACTVS 3.385 "CN(CC[CH](Oc1ccc(cc1)c2ccccc2)c3ccc(F)cc3)CC(O)=O" W5F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CC[C@H](c1ccc(cc1)F)Oc2ccc(cc2)c3ccccc3)CC(=O)O" W5F SMILES "OpenEye OEToolkits" 2.0.7 "CN(CCC(c1ccc(cc1)F)Oc2ccc(cc2)c3ccccc3)CC(=O)O" # _pdbx_chem_comp_identifier.comp_id W5F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[[(3~{R})-3-(4-fluorophenyl)-3-(4-phenylphenoxy)propyl]-methyl-amino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W5F "Create component" 2023-09-20 PDBJ W5F "Initial release" 2024-04-03 RCSB # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 W5F "2-[[(3~{R})-3-(4-fluorophenyl)-3-(4-phenylphenoxy)propyl]-methyl-amino]ethanoic acid" PDB ? 2 W5F ALX-5407 AUTHOR ? 3 W5F "(R)-NFPS" PUBCHEM ? #