data_W6J # _chem_comp.id W6J _chem_comp.name "1-(pyridin-2-yl)-1,4-diazepane" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H15 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-29 _chem_comp.pdbx_modified_date 2020-12-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 177.246 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W6J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RUV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W6J C10 C1 C 0 1 N N N -38.569 -0.893 17.949 2.327 1.464 -0.030 C10 W6J 1 W6J N12 N1 N 0 1 Y N N -35.465 0.807 17.486 -1.602 -1.090 0.258 N12 W6J 2 W6J C13 C2 C 0 1 Y N N -34.512 1.506 17.910 -2.903 -1.210 0.444 C13 W6J 3 W6J C01 C3 C 0 1 Y N N -34.467 2.884 17.668 -3.754 -0.152 0.194 C01 W6J 4 W6J C02 C4 C 0 1 Y N N -35.487 3.454 16.913 -3.229 1.051 -0.258 C02 W6J 5 W6J C03 C5 C 0 1 Y N N -36.489 2.638 16.510 -1.861 1.147 -0.443 C03 W6J 6 W6J C04 C6 C 0 1 Y N N -36.471 1.317 16.795 -1.063 0.040 -0.172 C04 W6J 7 W6J C06 C7 C 0 1 N N N -38.569 1.003 15.511 0.970 -1.158 -0.010 C06 W6J 8 W6J C07 C8 C 0 1 N N N -39.740 1.494 16.349 2.256 -1.260 -0.790 C07 W6J 9 W6J C08 C9 C 0 1 N N N -40.587 0.392 17.032 3.461 -0.711 0.000 C08 W6J 10 W6J C11 C10 C 0 1 N N N -37.619 -0.920 16.824 0.842 1.233 0.315 C11 W6J 11 W6J N05 N2 N 0 1 N N N -37.562 0.425 16.290 0.313 0.122 -0.353 N05 W6J 12 W6J N09 N3 N 0 1 N N N -39.954 -0.702 17.724 3.135 0.536 0.729 N09 W6J 13 W6J H101 H1 H 0 0 N N N -38.466 -1.856 18.470 2.484 1.297 -1.096 H101 W6J 14 W6J H102 H2 H 0 0 N N N -38.244 -0.080 18.614 2.606 2.486 0.225 H102 W6J 15 W6J H131 H3 H 0 0 N N N -33.716 1.037 18.469 -3.307 -2.148 0.796 H131 W6J 16 W6J H011 H4 H 0 0 N N N -33.661 3.489 18.057 -4.818 -0.259 0.348 H011 W6J 17 W6J H021 H5 H 0 0 N N N -35.480 4.504 16.659 -3.874 1.894 -0.461 H021 W6J 18 W6J H031 H6 H 0 0 N N N -37.317 3.049 15.951 -1.419 2.068 -0.794 H031 W6J 19 W6J H062 H7 H 0 0 N N N -38.145 1.857 14.962 0.315 -1.988 -0.274 H062 W6J 20 W6J H061 H8 H 0 0 N N N -38.937 0.253 14.795 1.186 -1.183 1.058 H061 W6J 21 W6J H072 H9 H 0 0 N N N -39.340 2.150 17.137 2.440 -2.306 -1.034 H072 W6J 22 W6J H071 H10 H 0 0 N N N -40.406 2.073 15.692 2.155 -0.694 -1.716 H071 W6J 23 W6J H081 H11 H 0 0 N N N -41.228 0.900 17.768 3.785 -1.464 0.718 H081 W6J 24 W6J H082 H12 H 0 0 N N N -41.214 -0.055 16.246 4.278 -0.513 -0.694 H082 W6J 25 W6J H112 H13 H 0 0 N N N -37.968 -1.620 16.050 0.748 1.077 1.390 H112 W6J 26 W6J H111 H14 H 0 0 N N N -36.624 -1.230 17.176 0.271 2.118 0.034 H111 W6J 27 W6J H1 H15 H 0 1 N N N -40.363 -0.698 18.637 2.710 0.333 1.622 H1 W6J 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W6J C06 N05 SING N N 1 W6J C06 C07 SING N N 2 W6J N05 C04 SING N N 3 W6J N05 C11 SING N N 4 W6J C07 C08 SING N N 5 W6J C03 C04 DOUB Y N 6 W6J C03 C02 SING Y N 7 W6J C04 N12 SING Y N 8 W6J C11 C10 SING N N 9 W6J C02 C01 DOUB Y N 10 W6J C08 N09 SING N N 11 W6J N12 C13 DOUB Y N 12 W6J C01 C13 SING Y N 13 W6J N09 C10 SING N N 14 W6J C10 H101 SING N N 15 W6J C10 H102 SING N N 16 W6J C13 H131 SING N N 17 W6J C01 H011 SING N N 18 W6J C02 H021 SING N N 19 W6J C03 H031 SING N N 20 W6J C06 H062 SING N N 21 W6J C06 H061 SING N N 22 W6J C07 H072 SING N N 23 W6J C07 H071 SING N N 24 W6J C08 H081 SING N N 25 W6J C08 H082 SING N N 26 W6J C11 H112 SING N N 27 W6J C11 H111 SING N N 28 W6J N09 H1 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W6J SMILES ACDLabs 12.01 "C2CN(c1ncccc1)CCCN2" W6J InChI InChI 1.03 "InChI=1S/C10H15N3/c1-2-6-12-10(4-1)13-8-3-5-11-7-9-13/h1-2,4,6,11H,3,5,7-9H2" W6J InChIKey InChI 1.03 YIVVBOYHOANILT-UHFFFAOYSA-N W6J SMILES_CANONICAL CACTVS 3.385 "C1CNCCN(C1)c2ccccn2" W6J SMILES CACTVS 3.385 "C1CNCCN(C1)c2ccccn2" W6J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)N2CCCNCC2" W6J SMILES "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)N2CCCNCC2" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W6J "SYSTEMATIC NAME" ACDLabs 12.01 "1-(pyridin-2-yl)-1,4-diazepane" W6J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-pyridin-2-yl-1,4-diazepane" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W6J "Create component" 2020-09-29 RCSB W6J "Initial release" 2020-12-16 RCSB ##