data_W7M # _chem_comp.id W7M _chem_comp.name "5-{2-[6-(methoxycarbonyl)naphthalen-2-yl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H16 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-03-13 _chem_comp.pdbx_modified_date 2014-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.340 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W7M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3W7M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W7M OAB OAB O 0 1 N N N 27.131 18.281 -14.439 -3.919 3.316 -0.122 OAB W7M 1 W7M CAR CAR C 0 1 N N N 27.945 17.299 -14.418 -3.320 2.111 -0.174 CAR W7M 2 W7M OAF OAF O 0 1 N N N 29.194 17.461 -14.465 -2.109 2.037 -0.229 OAF W7M 3 W7M CAV CAV C 0 1 N N N 27.471 15.986 -14.436 -4.138 0.875 -0.163 CAV W7M 4 W7M NAO NAO N 0 1 N N N 27.998 15.193 -15.456 -5.502 0.945 0.024 NAO W7M 5 W7M CAX CAX C 0 1 N N N 27.628 13.872 -15.573 -6.261 -0.163 0.038 CAX W7M 6 W7M OAD OAD O 0 1 N N N 28.097 13.169 -16.474 -7.460 -0.057 0.206 OAD W7M 7 W7M NAP NAP N 0 1 N N N 26.735 13.366 -14.681 -5.729 -1.387 -0.130 NAP W7M 8 W7M CAY CAY C 0 1 N N N 26.193 14.139 -13.647 -4.401 -1.535 -0.318 CAY W7M 9 W7M OAE OAE O 0 1 N N N 25.367 13.610 -12.873 -3.917 -2.641 -0.471 OAE W7M 10 W7M CAW CAW C 0 1 N N N 26.567 15.471 -13.520 -3.552 -0.338 -0.342 CAW W7M 11 W7M CAN CAN C 0 1 N N N 26.034 16.203 -12.458 -2.064 -0.451 -0.555 CAN W7M 12 W7M CAM CAM C 0 1 N N N 26.840 15.784 -11.139 -1.369 -0.642 0.795 CAM W7M 13 W7M CAT CAT C 0 1 Y N N 28.069 16.481 -10.962 0.119 -0.755 0.582 CAT W7M 14 W7M CAK CAK C 0 1 Y N N 28.164 17.654 -10.186 0.886 0.369 0.599 CAK W7M 15 W7M CAG CAG C 0 1 Y N N 29.237 15.981 -11.547 0.689 -2.010 0.377 CAG W7M 16 W7M CAI CAI C 0 1 Y N N 30.465 16.645 -11.397 2.029 -2.148 0.183 CAI W7M 17 W7M CBA CBA C 0 1 Y N N 30.566 17.818 -10.649 2.853 -1.008 0.188 CBA W7M 18 W7M CAL CAL C 0 1 Y N N 31.798 18.468 -10.528 4.238 -1.114 -0.009 CAL W7M 19 W7M CAZ CAZ C 0 1 Y N N 29.411 18.326 -10.025 2.273 0.269 0.402 CAZ W7M 20 W7M CAJ CAJ C 0 1 Y N N 29.524 19.513 -9.284 3.092 1.413 0.414 CAJ W7M 21 W7M CAH CAH C 0 1 Y N N 30.772 20.144 -9.166 4.431 1.292 0.221 CAH W7M 22 W7M CAU CAU C 0 1 Y N N 31.945 19.654 -9.775 5.017 0.032 0.004 CAU W7M 23 W7M CAS CAS C 0 1 N N N 33.188 20.363 -9.591 6.475 -0.072 -0.202 CAS W7M 24 W7M OAC OAC O 0 1 N N N 33.225 21.463 -9.048 6.988 -1.158 -0.382 OAC W7M 25 W7M OAQ OAQ O 0 1 N N N 34.376 19.790 -9.941 7.238 1.039 -0.191 OAQ W7M 26 W7M CAA CAA C 0 1 N N N 34.571 19.413 -11.290 8.664 0.862 -0.401 CAA W7M 27 W7M H1 H1 H 0 1 N N N 27.618 19.095 -14.493 -3.344 4.093 -0.132 H1 W7M 28 W7M H2 H2 H 0 1 N N N 26.456 12.410 -14.766 -6.304 -2.168 -0.115 H2 W7M 29 W7M H4 H4 H 0 1 N N N 26.153 17.280 -12.646 -1.853 -1.307 -1.196 H4 W7M 30 W7M H5 H5 H 0 1 N N N 24.966 15.968 -12.337 -1.694 0.458 -1.029 H5 W7M 31 W7M H6 H6 H 0 1 N N N 26.201 15.983 -10.266 -1.580 0.214 1.436 H6 W7M 32 W7M H7 H7 H 0 1 N N N 27.059 14.707 -11.195 -1.738 -1.551 1.269 H7 W7M 33 W7M H8 H8 H 0 1 N N N 27.280 18.049 -9.707 0.430 1.334 0.763 H8 W7M 34 W7M H9 H9 H 0 1 N N N 29.194 15.069 -12.124 0.058 -2.887 0.372 H9 W7M 35 W7M H10 H10 H 0 1 N N N 31.348 16.240 -11.870 2.457 -3.127 0.025 H10 W7M 36 W7M H11 H11 H 0 1 N N N 32.662 18.051 -11.024 4.693 -2.080 -0.168 H11 W7M 37 W7M H12 H12 H 0 1 N N N 28.654 19.939 -8.807 2.656 2.387 0.576 H12 W7M 38 W7M H13 H13 H 0 1 N N N 30.837 21.049 -8.580 5.052 2.175 0.232 H13 W7M 39 W7M H14 H14 H 0 1 N N N 35.571 18.970 -11.407 8.833 0.400 -1.373 H14 W7M 40 W7M H15 H15 H 0 1 N N N 33.807 18.676 -11.579 9.159 1.832 -0.368 H15 W7M 41 W7M H16 H16 H 0 1 N N N 34.486 20.300 -11.935 9.069 0.220 0.382 H16 W7M 42 W7M H17 H17 H 0 1 N N N 28.648 15.586 -16.106 -5.922 1.811 0.148 H17 W7M 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W7M OAD CAX DOUB N N 1 W7M CAX NAO SING N N 2 W7M CAX NAP SING N N 3 W7M NAO CAV SING N N 4 W7M NAP CAY SING N N 5 W7M OAF CAR DOUB N N 6 W7M OAB CAR SING N N 7 W7M CAV CAR SING N N 8 W7M CAV CAW DOUB N N 9 W7M CAY CAW SING N N 10 W7M CAY OAE DOUB N N 11 W7M CAW CAN SING N N 12 W7M CAN CAM SING N N 13 W7M CAG CAI DOUB Y N 14 W7M CAG CAT SING Y N 15 W7M CAI CBA SING Y N 16 W7M CAA OAQ SING N N 17 W7M CAM CAT SING N N 18 W7M CAT CAK DOUB Y N 19 W7M CBA CAL DOUB Y N 20 W7M CBA CAZ SING Y N 21 W7M CAL CAU SING Y N 22 W7M CAK CAZ SING Y N 23 W7M CAZ CAJ DOUB Y N 24 W7M OAQ CAS SING N N 25 W7M CAU CAS SING N N 26 W7M CAU CAH DOUB Y N 27 W7M CAS OAC DOUB N N 28 W7M CAJ CAH SING Y N 29 W7M OAB H1 SING N N 30 W7M NAP H2 SING N N 31 W7M CAN H4 SING N N 32 W7M CAN H5 SING N N 33 W7M CAM H6 SING N N 34 W7M CAM H7 SING N N 35 W7M CAK H8 SING N N 36 W7M CAG H9 SING N N 37 W7M CAI H10 SING N N 38 W7M CAL H11 SING N N 39 W7M CAJ H12 SING N N 40 W7M CAH H13 SING N N 41 W7M CAA H14 SING N N 42 W7M CAA H15 SING N N 43 W7M CAA H16 SING N N 44 W7M NAO H17 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W7M SMILES ACDLabs 12.01 "O=C1NC(C(=O)O)=C(C(=O)N1)CCc3cc2ccc(C(=O)OC)cc2cc3" W7M InChI InChI 1.03 "InChI=1S/C19H16N2O6/c1-27-18(25)13-6-5-11-8-10(2-4-12(11)9-13)3-7-14-15(17(23)24)20-19(26)21-16(14)22/h2,4-6,8-9H,3,7H2,1H3,(H,23,24)(H2,20,21,22,26)" W7M InChIKey InChI 1.03 CSJUEBHIWIFLHU-UHFFFAOYSA-N W7M SMILES_CANONICAL CACTVS 3.370 "COC(=O)c1ccc2cc(CCC3=C(NC(=O)NC3=O)C(O)=O)ccc2c1" W7M SMILES CACTVS 3.370 "COC(=O)c1ccc2cc(CCC3=C(NC(=O)NC3=O)C(O)=O)ccc2c1" W7M SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COC(=O)c1ccc2cc(ccc2c1)CCC3=C(NC(=O)NC3=O)C(=O)O" W7M SMILES "OpenEye OEToolkits" 1.7.6 "COC(=O)c1ccc2cc(ccc2c1)CCC3=C(NC(=O)NC3=O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W7M "SYSTEMATIC NAME" ACDLabs 12.01 "5-{2-[6-(methoxycarbonyl)naphthalen-2-yl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" W7M "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[2-(6-methoxycarbonylnaphthalen-2-yl)ethyl]-2,4-bis(oxidanylidene)-1H-pyrimidine-6-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W7M "Create component" 2013-03-13 PDBJ W7M "Initial release" 2014-03-05 RCSB #