data_W8J # _chem_comp.id W8J _chem_comp.name "3-{3-[(3S)-oxolan-3-yl]propyl}-3H-purin-6-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-29 _chem_comp.pdbx_modified_date 2020-12-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 247.296 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W8J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RVG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W8J C10 C1 C 0 1 N N N -45.864 -30.707 1.508 1.128 -0.106 -0.276 C10 W8J 1 W8J C13 C2 C 0 1 N N N -43.531 -32.482 1.926 3.803 0.971 0.664 C13 W8J 2 W8J C15 C3 C 0 1 N N N -41.539 -31.489 1.089 5.885 -0.115 0.574 C15 W8J 3 W8J C17 C4 C 0 1 Y N N -47.667 -29.045 3.330 -1.599 1.546 -0.808 C17 W8J 4 W8J C02 C5 C 0 1 Y N N -47.874 -28.899 5.649 -3.613 1.123 0.247 C02 W8J 5 W8J C03 C6 C 0 1 Y N N -46.498 -29.113 5.772 -3.307 -0.248 0.305 C03 W8J 6 W8J C05 C7 C 0 1 Y N N -44.439 -29.416 6.355 -3.149 -2.382 0.550 C05 W8J 7 W8J C07 C8 C 0 1 Y N N -45.775 -29.287 4.680 -2.076 -0.684 -0.234 C07 W8J 8 W8J C09 C9 C 0 1 N N N -45.507 -29.426 2.263 0.049 -0.158 -1.360 C09 W8J 9 W8J C11 C10 C 0 1 N N N -44.812 -30.994 0.406 2.470 -0.535 -0.872 C11 W8J 10 W8J C12 C11 C 0 1 N N S -43.875 -32.262 0.634 3.549 -0.483 0.212 C12 W8J 11 W8J C16 C12 C 0 1 N N N -42.515 -32.112 -0.021 4.931 -0.896 -0.363 C16 W8J 12 W8J N01 N1 N 0 1 N N N -48.733 -28.701 6.796 -4.797 1.593 0.758 N01 W8J 13 W8J N04 N2 N 0 1 Y N N -45.667 -29.189 6.824 -3.925 -1.344 0.775 N04 W8J 14 W8J N06 N3 N 0 1 Y N N -44.486 -29.466 5.027 -2.032 -1.996 -0.057 N06 W8J 15 W8J N08 N4 N 0 1 Y N N -46.355 -29.243 3.455 -1.237 0.253 -0.790 N08 W8J 16 W8J N18 N5 N 0 1 Y N N -48.408 -28.866 4.437 -2.736 1.962 -0.312 N18 W8J 17 W8J O14 O1 O 0 1 N N N -42.060 -31.837 2.190 5.216 1.128 0.839 O14 W8J 18 W8J H101 H1 H 0 0 N N N -46.854 -30.590 1.043 1.209 0.911 0.107 H101 W8J 19 W8J H102 H2 H 0 0 N N N -45.888 -31.550 2.215 0.859 -0.780 0.537 H102 W8J 20 W8J H132 H3 H 0 0 N N N -44.268 -32.008 2.591 3.445 1.663 -0.097 H132 W8J 21 W8J H131 H4 H 0 0 N N N -43.502 -33.564 2.122 3.291 1.161 1.607 H131 W8J 22 W8J H151 H5 H 0 0 N N N -40.523 -31.900 0.991 6.039 -0.666 1.502 H151 W8J 23 W8J H152 H6 H 0 0 N N N -41.501 -30.393 1.004 6.839 0.066 0.079 H152 W8J 24 W8J H171 H7 H 0 0 N N N -48.128 -29.029 2.353 -0.926 2.270 -1.244 H171 W8J 25 W8J H051 H8 H 0 0 N N N -43.550 -29.539 6.956 -3.384 -3.401 0.821 H051 W8J 26 W8J H092 H9 H 0 0 N N N -44.455 -29.479 2.579 0.318 0.517 -2.173 H092 W8J 27 W8J H091 H10 H 0 0 N N N -45.645 -28.566 1.591 -0.032 -1.175 -1.743 H091 W8J 28 W8J H112 H11 H 0 0 N N N -44.164 -30.109 0.324 2.389 -1.552 -1.255 H112 W8J 29 W8J H111 H12 H 0 0 N N N -45.351 -31.143 -0.541 2.739 0.139 -1.685 H111 W8J 30 W8J H121 H13 H 0 0 N N N -44.382 -33.138 0.203 3.275 -1.111 1.060 H121 W8J 31 W8J H161 H14 H 0 0 N N N -42.141 -33.093 -0.348 5.040 -0.568 -1.397 H161 W8J 32 W8J H162 H15 H 0 0 N N N -42.583 -31.438 -0.888 5.087 -1.971 -0.276 H162 W8J 33 W8J H012 H16 H 0 0 N N N -49.673 -28.557 6.488 -5.429 0.978 1.163 H012 W8J 34 W8J H011 H17 H 0 0 N N N -48.695 -29.509 7.384 -5.002 2.540 0.715 H011 W8J 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W8J C16 C12 SING N N 1 W8J C16 C15 SING N N 2 W8J C11 C12 SING N N 3 W8J C11 C10 SING N N 4 W8J C12 C13 SING N N 5 W8J C15 O14 SING N N 6 W8J C10 C09 SING N N 7 W8J C13 O14 SING N N 8 W8J C09 N08 SING N N 9 W8J C17 N08 SING Y N 10 W8J C17 N18 DOUB Y N 11 W8J N08 C07 SING Y N 12 W8J N18 C02 SING Y N 13 W8J C07 N06 DOUB Y N 14 W8J C07 C03 SING Y N 15 W8J N06 C05 SING Y N 16 W8J C02 C03 DOUB Y N 17 W8J C02 N01 SING N N 18 W8J C03 N04 SING Y N 19 W8J C05 N04 DOUB Y N 20 W8J C10 H101 SING N N 21 W8J C10 H102 SING N N 22 W8J C13 H132 SING N N 23 W8J C13 H131 SING N N 24 W8J C15 H151 SING N N 25 W8J C15 H152 SING N N 26 W8J C17 H171 SING N N 27 W8J C05 H051 SING N N 28 W8J C09 H092 SING N N 29 W8J C09 H091 SING N N 30 W8J C11 H112 SING N N 31 W8J C11 H111 SING N N 32 W8J C12 H121 SING N N 33 W8J C16 H161 SING N N 34 W8J C16 H162 SING N N 35 W8J N01 H012 SING N N 36 W8J N01 H011 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W8J SMILES ACDLabs 12.01 "C(CN2C=NC(=C1N=CN=C12)N)CC3COCC3" W8J InChI InChI 1.03 "InChI=1S/C12H17N5O/c13-11-10-12(15-7-14-10)17(8-16-11)4-1-2-9-3-5-18-6-9/h7-9H,1-6,13H2/t9-/m0/s1" W8J InChIKey InChI 1.03 GTHFXQJDSWIMIA-VIFPVBQESA-N W8J SMILES_CANONICAL CACTVS 3.385 "Nc1ncn(CCC[C@H]2CCOC2)c3ncnc13" W8J SMILES CACTVS 3.385 "Nc1ncn(CCC[CH]2CCOC2)c3ncnc13" W8J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc-2c(ncn(c2n1)CCC[C@H]3CCOC3)N" W8J SMILES "OpenEye OEToolkits" 2.0.7 "c1nc-2c(ncn(c2n1)CCCC3CCOC3)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W8J "SYSTEMATIC NAME" ACDLabs 12.01 "3-{3-[(3S)-oxolan-3-yl]propyl}-3H-purin-6-amine" W8J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[3-[(3~{S})-oxolan-3-yl]propyl]purin-6-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W8J "Create component" 2020-09-29 RCSB W8J "Initial release" 2020-12-16 RCSB ##