data_W8Z # _chem_comp.id W8Z _chem_comp.name "5-{2-[3-(methoxymethoxy)naphthalen-2-yl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H18 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-03-18 _chem_comp.pdbx_modified_date 2014-03-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 370.356 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W8Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3W84 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W8Z OAB OAB O 0 1 N N N 7.039 18.215 14.363 1.378 -1.823 -0.049 OAB W8Z 1 W8Z CAS CAS C 0 1 N N N 6.263 17.248 14.419 2.582 -1.689 0.023 CAS W8Z 2 W8Z OAE OAE O 0 1 N N N 5.031 17.414 14.477 3.373 -2.770 0.161 OAE W8Z 3 W8Z CAV CAV C 0 1 N N N 6.755 15.918 14.443 3.182 -0.335 -0.047 CAV W8Z 4 W8Z NAO NAO N 0 1 N N N 6.247 15.075 15.503 4.535 -0.163 0.157 NAO W8Z 5 W8Z CAX CAX C 0 1 N N N 6.652 13.755 15.600 5.097 1.056 0.097 CAX W8Z 6 W8Z OAC OAC O 0 1 N N N 6.199 12.973 16.449 6.294 1.165 0.283 OAC W8Z 7 W8Z NAP NAP N 0 1 N N N 7.498 13.309 14.611 4.372 2.158 -0.163 NAP W8Z 8 W8Z CAY CAY C 0 1 N N N 7.995 14.078 13.577 3.043 2.068 -0.374 CAY W8Z 9 W8Z OAD OAD O 0 1 N N N 8.780 13.500 12.814 2.384 3.063 -0.610 OAD W8Z 10 W8Z CAW CAW C 0 1 N N N 7.623 15.431 13.459 2.406 0.746 -0.319 CAW W8Z 11 W8Z CAM CAM C 0 1 N N N 8.042 16.265 12.435 0.924 0.594 -0.549 CAM W8Z 12 W8Z CAL CAL C 0 1 N N N 7.580 15.731 11.021 0.182 0.768 0.778 CAL W8Z 13 W8Z CAT CAT C 0 1 Y N N 6.293 16.333 10.794 -1.299 0.616 0.549 CAT W8Z 14 W8Z CAJ CAJ C 0 1 Y N N 6.182 17.608 10.232 -2.063 1.722 0.340 CAJ W8Z 15 W8Z CAZ CAZ C 0 1 Y N N 4.943 18.234 10.029 -3.445 1.585 0.125 CAZ W8Z 16 W8Z CAH CAH C 0 1 Y N N 4.875 19.493 9.456 -4.263 2.706 -0.094 CAH W8Z 17 W8Z CAF CAF C 0 1 Y N N 3.623 20.099 9.294 -5.598 2.536 -0.299 CAF W8Z 18 W8Z CAG CAG C 0 1 Y N N 2.439 19.474 9.680 -6.169 1.265 -0.295 CAG W8Z 19 W8Z CAI CAI C 0 1 Y N N 2.519 18.201 10.248 -5.409 0.156 -0.085 CAI W8Z 20 W8Z CBA CBA C 0 1 Y N N 3.772 17.601 10.416 -4.026 0.291 0.130 CBA W8Z 21 W8Z CAK CAK C 0 1 Y N N 3.855 16.337 10.967 -3.210 -0.830 0.348 CAK W8Z 22 W8Z CAU CAU C 0 1 Y N N 5.091 15.698 11.155 -1.869 -0.661 0.548 CAU W8Z 23 W8Z OAR OAR O 0 1 N N N 5.179 14.441 11.694 -1.079 -1.748 0.754 OAR W8Z 24 W8Z CAN CAN C 0 1 N N N 3.966 13.685 11.542 -1.719 -3.026 0.742 CAN W8Z 25 W8Z OAQ OAQ O 0 1 N N N 4.251 12.588 10.670 -2.031 -3.390 -0.604 OAQ W8Z 26 W8Z CAA CAA C 0 1 N N N 3.810 12.710 9.331 -0.900 -3.809 -1.370 CAA W8Z 27 W8Z H1 H1 H 0 1 N N N 4.836 18.344 14.470 2.936 -3.632 0.199 H1 W8Z 28 W8Z H2 H2 H 0 1 N N N 5.600 15.448 16.169 5.090 -0.935 0.347 H2 W8Z 29 W8Z H3 H3 H 0 1 N N N 7.776 12.349 14.643 4.808 3.024 -0.199 H3 W8Z 30 W8Z H4 H4 H 0 1 N N N 9.140 16.326 12.452 0.586 1.351 -1.256 H4 W8Z 31 W8Z H5 H5 H 0 1 N N N 7.616 17.267 12.594 0.719 -0.398 -0.952 H5 W8Z 32 W8Z H6 H6 H 0 1 N N N 7.497 14.634 11.031 0.520 0.011 1.486 H6 W8Z 33 W8Z H7 H7 H 0 1 N N N 8.292 16.038 10.241 0.387 1.760 1.181 H7 W8Z 34 W8Z H8 H8 H 0 1 N N N 7.082 18.130 9.944 -1.609 2.702 0.340 H8 W8Z 35 W8Z H9 H9 H 0 1 N N N 5.774 20.000 9.139 -3.835 3.697 -0.100 H9 W8Z 36 W8Z H10 H10 H 0 1 N N N 3.573 21.084 8.855 -6.224 3.400 -0.467 H10 W8Z 37 W8Z H11 H11 H 0 1 N N N 1.485 19.961 9.543 -7.231 1.158 -0.460 H11 W8Z 38 W8Z H12 H12 H 0 1 N N N 1.622 17.684 10.555 -5.865 -0.823 -0.084 H12 W8Z 39 W8Z H13 H13 H 0 1 N N N 2.948 15.829 11.260 -3.639 -1.821 0.354 H13 W8Z 40 W8Z H14 H14 H 0 1 N N N 3.181 14.319 11.104 -1.050 -3.770 1.174 H14 W8Z 41 W8Z H15 H15 H 0 1 N N N 3.632 13.310 12.521 -2.636 -2.978 1.328 H15 W8Z 42 W8Z H16 H16 H 0 1 N N N 4.089 11.807 8.769 -0.172 -2.998 -1.417 H16 W8Z 43 W8Z H17 H17 H 0 1 N N N 2.717 12.829 9.315 -0.444 -4.679 -0.899 H17 W8Z 44 W8Z H18 H18 H 0 1 N N N 4.281 13.590 8.869 -1.220 -4.067 -2.380 H18 W8Z 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W8Z CAF CAH DOUB Y N 1 W8Z CAF CAG SING Y N 2 W8Z CAA OAQ SING N N 3 W8Z CAH CAZ SING Y N 4 W8Z CAG CAI DOUB Y N 5 W8Z CAZ CAJ DOUB Y N 6 W8Z CAZ CBA SING Y N 7 W8Z CAJ CAT SING Y N 8 W8Z CAI CBA SING Y N 9 W8Z CBA CAK DOUB Y N 10 W8Z OAQ CAN SING N N 11 W8Z CAT CAL SING N N 12 W8Z CAT CAU DOUB Y N 13 W8Z CAK CAU SING Y N 14 W8Z CAL CAM SING N N 15 W8Z CAU OAR SING N N 16 W8Z CAN OAR SING N N 17 W8Z CAM CAW SING N N 18 W8Z OAD CAY DOUB N N 19 W8Z CAW CAY SING N N 20 W8Z CAW CAV DOUB N N 21 W8Z CAY NAP SING N N 22 W8Z OAB CAS DOUB N N 23 W8Z CAS CAV SING N N 24 W8Z CAS OAE SING N N 25 W8Z CAV NAO SING N N 26 W8Z NAP CAX SING N N 27 W8Z NAO CAX SING N N 28 W8Z CAX OAC DOUB N N 29 W8Z OAE H1 SING N N 30 W8Z NAO H2 SING N N 31 W8Z NAP H3 SING N N 32 W8Z CAM H4 SING N N 33 W8Z CAM H5 SING N N 34 W8Z CAL H6 SING N N 35 W8Z CAL H7 SING N N 36 W8Z CAJ H8 SING N N 37 W8Z CAH H9 SING N N 38 W8Z CAF H10 SING N N 39 W8Z CAG H11 SING N N 40 W8Z CAI H12 SING N N 41 W8Z CAK H13 SING N N 42 W8Z CAN H14 SING N N 43 W8Z CAN H15 SING N N 44 W8Z CAA H16 SING N N 45 W8Z CAA H17 SING N N 46 W8Z CAA H18 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W8Z SMILES ACDLabs 12.01 "O=C1NC(C(=O)O)=C(C(=O)N1)CCc3cc2ccccc2cc3OCOC" W8Z InChI InChI 1.03 "InChI=1S/C19H18N2O6/c1-26-10-27-15-9-12-5-3-2-4-11(12)8-13(15)6-7-14-16(18(23)24)20-19(25)21-17(14)22/h2-5,8-9H,6-7,10H2,1H3,(H,23,24)(H2,20,21,22,25)" W8Z InChIKey InChI 1.03 UIWLSMYBMFEGSE-UHFFFAOYSA-N W8Z SMILES_CANONICAL CACTVS 3.370 "COCOc1cc2ccccc2cc1CCC3=C(NC(=O)NC3=O)C(O)=O" W8Z SMILES CACTVS 3.370 "COCOc1cc2ccccc2cc1CCC3=C(NC(=O)NC3=O)C(O)=O" W8Z SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COCOc1cc2ccccc2cc1CCC3=C(NC(=O)NC3=O)C(=O)O" W8Z SMILES "OpenEye OEToolkits" 1.7.6 "COCOc1cc2ccccc2cc1CCC3=C(NC(=O)NC3=O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W8Z "SYSTEMATIC NAME" ACDLabs 12.01 "5-{2-[3-(methoxymethoxy)naphthalen-2-yl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" W8Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[2-[3-(methoxymethoxy)naphthalen-2-yl]ethyl]-2,4-bis(oxidanylidene)-1H-pyrimidine-6-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W8Z "Create component" 2013-03-18 PDBJ W8Z "Initial release" 2014-03-12 RCSB #