data_W9G # _chem_comp.id W9G _chem_comp.name "(1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(9-methoxynonyl)amino]cyclohexane-1,2,3,4-tetrol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H35 N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-02 _chem_comp.pdbx_modified_date 2021-09-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 349.463 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W9G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7K9N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W9G N1 N1 N 0 1 N N N 7.340 24.475 16.909 2.136 0.121 -0.841 N1 W9G 1 W9G C4 C1 C 0 1 N N N 8.372 25.942 15.087 4.435 0.338 -1.657 C4 W9G 2 W9G C5 C2 C 0 1 N N S 7.421 25.785 16.266 3.260 -0.616 -1.433 C5 W9G 3 W9G C6 C3 C 0 1 N N N 8.367 23.540 16.447 0.858 -0.536 -1.144 C6 W9G 4 W9G C7 C4 C 0 1 N N N 8.023 22.100 16.844 -0.286 0.259 -0.512 C7 W9G 5 W9G C8 C5 C 0 1 N N N 9.258 21.197 16.925 -1.618 -0.425 -0.827 C8 W9G 6 W9G C10 C6 C 0 1 N N N 10.523 19.261 15.833 -4.094 -0.314 -0.510 C10 W9G 7 W9G C13 C7 C 0 1 N N N 13.755 19.127 18.035 -7.714 0.592 0.439 C13 W9G 8 W9G C15 C8 C 0 1 N N N 16.662 17.836 18.052 -11.409 0.093 0.479 C15 W9G 9 W9G C17 C9 C 0 1 N N R 5.368 26.331 15.061 4.121 -1.140 0.853 C17 W9G 10 W9G C1 C10 C 0 1 N N S 6.203 26.470 13.771 5.296 -0.185 0.629 C1 W9G 11 W9G C11 C11 C 0 1 N N N 11.346 19.316 17.129 -5.238 0.481 0.122 C11 W9G 12 W9G C12 C12 C 0 1 N N N 12.736 18.678 16.985 -6.570 -0.203 -0.193 C12 W9G 13 W9G C14 C13 C 0 1 N N N 15.108 19.477 17.416 -9.045 -0.093 0.124 C14 W9G 14 W9G C16 C14 C 0 1 N N S 6.197 26.705 16.302 3.689 -1.739 -0.487 C16 W9G 15 W9G C2 C15 C 0 1 N N S 7.539 25.686 13.831 4.868 0.938 -0.318 C2 W9G 16 W9G C3 C16 C 0 1 N N N 8.388 25.972 12.585 6.042 1.892 -0.542 C3 W9G 17 W9G C9 C17 C 0 1 N N N 9.227 20.077 15.886 -2.762 0.370 -0.195 C9 W9G 18 W9G O1 O1 O 0 1 N N N 5.435 25.909 12.731 5.700 0.375 1.880 O1 W9G 19 W9G O2 O2 O 0 1 N N N 8.641 27.335 12.487 6.521 2.362 0.720 O2 W9G 20 W9G O3 O3 O 0 1 N N N 7.238 24.314 13.836 3.774 1.655 0.258 O3 W9G 21 W9G O4 O4 O 0 1 N N N 16.113 19.096 18.316 -10.114 0.650 0.714 O4 W9G 22 W9G O5 O5 O 0 1 N N N 5.445 26.582 17.488 2.592 -2.631 -0.277 O5 W9G 23 W9G O6 O6 O 0 1 N N N 4.160 27.068 14.995 4.522 -2.189 1.737 O6 W9G 24 W9G H1 H1 H 0 1 N N N 7.444 24.599 17.896 2.260 0.231 0.154 H1 W9G 25 W9G H3 H3 H 0 1 N N N 9.191 25.211 15.157 5.269 -0.209 -2.097 H3 W9G 26 W9G H4 H4 H 0 1 N N N 8.790 26.959 15.067 4.130 1.138 -2.332 H4 W9G 27 W9G H5 H5 H 0 1 N N N 8.026 26.302 17.025 2.952 -1.043 -2.388 H5 W9G 28 W9G H6 H6 H 0 1 N N N 9.332 23.816 16.897 0.718 -0.578 -2.224 H6 W9G 29 W9G H7 H7 H 0 1 N N N 8.442 23.602 15.351 0.864 -1.548 -0.738 H7 W9G 30 W9G H8 H8 H 0 1 N N N 7.532 22.114 17.828 -0.146 0.302 0.568 H8 W9G 31 W9G H9 H9 H 0 1 N N N 7.332 21.684 16.096 -0.293 1.271 -0.917 H9 W9G 32 W9G H10 H10 H 0 1 N N N 9.302 20.748 17.928 -1.758 -0.468 -1.907 H10 W9G 33 W9G H11 H11 H 0 1 N N N 10.156 21.810 16.758 -1.611 -1.437 -0.421 H11 W9G 34 W9G H12 H12 H 0 1 N N N 10.263 18.211 15.632 -4.087 -1.326 -0.104 H12 W9G 35 W9G H13 H13 H 0 1 N N N 11.143 19.649 15.012 -4.234 -0.357 -1.590 H13 W9G 36 W9G H14 H14 H 0 1 N N N 13.362 20.015 18.553 -7.574 0.635 1.519 H14 W9G 37 W9G H15 H15 H 0 1 N N N 13.898 18.313 18.761 -7.720 1.604 0.033 H15 W9G 38 W9G H16 H16 H 0 1 N N N 17.439 17.611 18.797 -12.165 0.715 0.959 H16 W9G 39 W9G H17 H17 H 0 1 N N N 15.871 17.073 18.105 -11.598 0.054 -0.594 H17 W9G 40 W9G H18 H18 H 0 1 N N N 17.107 17.834 17.046 -11.451 -0.915 0.892 H18 W9G 41 W9G H19 H19 H 0 1 N N N 5.115 25.265 15.159 3.287 -0.592 1.292 H19 W9G 42 W9G H20 H20 H 0 1 N N N 6.413 27.533 13.584 6.130 -0.733 0.190 H20 W9G 43 W9G H21 H21 H 0 1 N N N 11.472 20.369 17.420 -5.098 0.524 1.202 H21 W9G 44 W9G H22 H22 H 0 1 N N N 10.795 18.782 17.917 -5.245 1.493 -0.284 H22 W9G 45 W9G H23 H23 H 0 1 N N N 12.622 17.587 17.062 -6.563 -1.215 0.213 H23 W9G 46 W9G H24 H24 H 0 1 N N N 13.131 18.936 15.991 -6.710 -0.246 -1.273 H24 W9G 47 W9G H25 H25 H 0 1 N N N 15.234 18.936 16.466 -9.186 -0.135 -0.956 H25 W9G 48 W9G H26 H26 H 0 1 N N N 15.164 20.560 17.232 -9.039 -1.104 0.530 H26 W9G 49 W9G H27 H27 H 0 1 N N N 6.542 27.743 16.184 4.523 -2.286 -0.926 H27 W9G 50 W9G H28 H28 H 0 1 N N N 7.845 25.637 11.689 6.843 1.366 -1.062 H28 W9G 51 W9G H29 H29 H 0 1 N N N 9.341 25.429 12.661 5.713 2.739 -1.144 H29 W9G 52 W9G H30 H30 H 0 1 N N N 9.056 20.524 14.896 -2.622 0.413 0.885 H30 W9G 53 W9G H31 H31 H 0 1 N N N 8.397 19.398 16.130 -2.769 1.382 -0.600 H31 W9G 54 W9G H32 H32 H 0 1 N N N 4.606 26.368 12.666 5.985 -0.282 2.531 H32 W9G 55 W9G H33 H33 H 0 1 N N N 9.167 27.505 11.714 7.268 2.973 0.654 H33 W9G 56 W9G H34 H34 H 0 1 N N N 6.711 24.108 14.599 3.977 2.063 1.111 H34 W9G 57 W9G H35 H35 H 0 1 N N N 5.985 26.820 18.232 2.792 -3.369 0.314 H35 W9G 58 W9G H36 H36 H 0 1 N N N 3.676 26.957 15.805 3.825 -2.832 1.924 H36 W9G 59 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W9G O2 C3 SING N N 1 W9G C3 C2 SING N N 2 W9G O1 C1 SING N N 3 W9G C1 C2 SING N N 4 W9G C1 C17 SING N N 5 W9G C2 O3 SING N N 6 W9G C2 C4 SING N N 7 W9G O6 C17 SING N N 8 W9G C17 C16 SING N N 9 W9G C4 C5 SING N N 10 W9G C10 C9 SING N N 11 W9G C10 C11 SING N N 12 W9G C9 C8 SING N N 13 W9G C5 C16 SING N N 14 W9G C5 N1 SING N N 15 W9G C16 O5 SING N N 16 W9G C6 C7 SING N N 17 W9G C6 N1 SING N N 18 W9G C7 C8 SING N N 19 W9G C12 C11 SING N N 20 W9G C12 C13 SING N N 21 W9G C14 C13 SING N N 22 W9G C14 O4 SING N N 23 W9G C15 O4 SING N N 24 W9G N1 H1 SING N N 25 W9G C4 H3 SING N N 26 W9G C4 H4 SING N N 27 W9G C5 H5 SING N N 28 W9G C6 H6 SING N N 29 W9G C6 H7 SING N N 30 W9G C7 H8 SING N N 31 W9G C7 H9 SING N N 32 W9G C8 H10 SING N N 33 W9G C8 H11 SING N N 34 W9G C10 H12 SING N N 35 W9G C10 H13 SING N N 36 W9G C13 H14 SING N N 37 W9G C13 H15 SING N N 38 W9G C15 H16 SING N N 39 W9G C15 H17 SING N N 40 W9G C15 H18 SING N N 41 W9G C17 H19 SING N N 42 W9G C1 H20 SING N N 43 W9G C11 H21 SING N N 44 W9G C11 H22 SING N N 45 W9G C12 H23 SING N N 46 W9G C12 H24 SING N N 47 W9G C14 H25 SING N N 48 W9G C14 H26 SING N N 49 W9G C16 H27 SING N N 50 W9G C3 H28 SING N N 51 W9G C3 H29 SING N N 52 W9G C9 H30 SING N N 53 W9G C9 H31 SING N N 54 W9G O1 H32 SING N N 55 W9G O2 H33 SING N N 56 W9G O3 H34 SING N N 57 W9G O5 H35 SING N N 58 W9G O6 H36 SING N N 59 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W9G SMILES ACDLabs 12.01 "N(C1CC(C(C(C1O)O)O)(O)CO)CCCCCCCCCOC" W9G InChI InChI 1.03 "InChI=1S/C17H35NO6/c1-24-10-8-6-4-2-3-5-7-9-18-13-11-17(23,12-19)16(22)15(21)14(13)20/h13-16,18-23H,2-12H2,1H3/t13-,14-,15+,16-,17-/m0/s1" W9G InChIKey InChI 1.03 OJZIBLPPMMRULX-KSWRQPAISA-N W9G SMILES_CANONICAL CACTVS 3.385 "COCCCCCCCCCN[C@H]1C[C@](O)(CO)[C@@H](O)[C@H](O)[C@H]1O" W9G SMILES CACTVS 3.385 "COCCCCCCCCCN[CH]1C[C](O)(CO)[CH](O)[CH](O)[CH]1O" W9G SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COCCCCCCCCCN[C@H]1C[C@@]([C@H]([C@@H]([C@H]1O)O)O)(CO)O" W9G SMILES "OpenEye OEToolkits" 2.0.7 "COCCCCCCCCCNC1CC(C(C(C1O)O)O)(CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier W9G "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(9-methoxynonyl)amino]cyclohexane-1,2,3,4-tetrol" W9G "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S},3~{R},4~{S},5~{S})-1-(hydroxymethyl)-5-(9-methoxynonylamino)cyclohexane-1,2,3,4-tetrol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W9G "Create component" 2020-10-02 RCSB W9G "Initial release" 2021-09-29 RCSB ##