data_W9X
#
_chem_comp.id W9X
_chem_comp.name "[6-azanyl-5-(2,6-dimethyl-3-oxidanyl-phenyl)-2,3-dimethyl-pyrrolo[2,3-b]pyrazin-7-yl]-(6,7-dihydro-4~{H}-pyrazolo[1,5-a]pyrazin-5-yl)methanone"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H25 N7 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-09-29
_chem_comp.pdbx_modified_date 2023-11-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 431.490
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code W9X
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8WJY
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBC
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
W9X N1 N1 N 0 1 Y N N N N N 6.505 -3.798 -2.607 0.187 3.066 0.217 N1 W9X 1
W9X C5 C1 C 0 1 Y N N N N N 4.822 -2.154 -2.645 1.547 1.132 0.050 C5 W9X 2
W9X C6 C2 C 0 1 Y N N N N N 6.172 -2.507 -2.632 0.339 1.813 -0.191 C6 W9X 3
W9X C8 C3 C 0 1 Y N N N N N 5.985 -0.233 -2.627 0.203 -0.310 -1.046 C8 W9X 4
W9X C13 C4 C 0 1 Y N N N N N 1.753 0.621 -4.322 4.350 -2.174 -1.415 C13 W9X 5
W9X C15 C5 C 0 1 Y N N N N N 1.446 0.636 -1.979 3.489 -2.966 0.680 C15 W9X 6
W9X C17 C6 C 0 1 N N N N N N 3.121 -0.200 -0.354 1.489 -1.903 1.755 C17 W9X 7
W9X C20 C7 C 0 1 N N N N N N 6.026 -6.164 -2.846 1.007 5.094 1.319 C20 W9X 8
W9X C21 C8 C 0 1 N N N N N N 3.115 -5.392 -2.826 3.483 3.707 1.815 C21 W9X 9
W9X C22 C9 C 0 1 N N N N N N 8.341 -0.997 -2.333 -1.894 1.104 -1.377 C22 W9X 10
W9X C24 C10 C 0 1 N N N N N N 10.660 -1.473 -1.991 -2.738 0.289 0.783 C24 W9X 11
W9X C28 C11 C 0 1 N N N N N N 8.935 -3.055 -1.044 -4.322 1.066 -1.023 C28 W9X 12
W9X C2 C12 C 0 1 Y N N N N N 5.552 -4.718 -2.746 1.175 3.671 0.852 C2 W9X 13
W9X C3 C13 C 0 1 Y N N N N N 4.208 -4.354 -2.758 2.364 3.003 1.090 C3 W9X 14
W9X N4 N2 N 0 1 Y N N N N N 3.864 -3.052 -2.831 2.527 1.756 0.688 N4 W9X 15
W9X N7 N3 N 0 1 Y N N N N N 4.753 -0.797 -2.692 1.430 -0.141 -0.477 N7 W9X 16
W9X C9 C14 C 0 1 Y N N N N N 6.926 -1.237 -2.520 -0.531 0.862 -0.907 C9 W9X 17
W9X N10 N4 N 0 1 N N N N N N 6.206 1.111 -2.577 -0.237 -1.456 -1.659 N10 W9X 18
W9X C11 C15 C 0 1 Y N N N N N 3.513 -0.155 -2.859 2.432 -1.119 -0.432 C11 W9X 19
W9X C12 C16 C 0 1 Y N N N N N 3.031 0.104 -4.138 3.362 -1.210 -1.460 C12 W9X 20
W9X C14 C17 C 0 1 Y N N N N N 0.944 0.827 -3.237 4.416 -3.051 -0.349 C14 W9X 21
W9X C16 C18 C 0 1 Y N N N N N 2.693 0.072 -1.760 2.496 -1.999 0.639 C16 W9X 22
W9X C18 C19 C 0 1 N N N N N N 3.940 -0.025 -5.331 3.294 -0.255 -2.624 C18 W9X 23
W9X O19 O1 O 0 1 N N N N N N 0.619 0.800 -0.946 3.555 -3.828 1.728 O19 W9X 24
W9X N23 N5 N 0 1 N N N N N N 9.252 -1.922 -1.918 -2.941 0.831 -0.573 N23 W9X 25
W9X C25 C20 C 0 1 Y N N N N N 11.494 -2.702 -1.908 -3.762 -0.803 0.980 C25 W9X 26
W9X N26 N6 N 0 1 Y N N N N N 11.016 -3.931 -1.641 -4.796 -1.033 0.138 N26 W9X 27
W9X C27 C21 C 0 1 N N N N N N 9.626 -4.292 -1.553 -5.067 -0.272 -1.085 C27 W9X 28
W9X C29 C22 C 0 1 Y N N N N N 12.833 -2.751 -1.953 -3.830 -1.702 1.980 C29 W9X 29
W9X C30 C23 C 0 1 Y N N N N N 13.176 -4.093 -1.865 -4.950 -2.512 1.750 C30 W9X 30
W9X N31 N7 N 0 1 Y N N N N N 12.089 -4.817 -1.671 -5.529 -2.108 0.647 N31 W9X 31
W9X O32 O2 O 0 1 N N N N N N 8.717 0.177 -2.511 -2.083 1.551 -2.493 O32 W9X 32
W9X H1 H1 H 0 1 N N N N N N 1.401 0.859 -5.315 5.070 -2.245 -2.217 H1 W9X 33
W9X H2 H2 H 0 1 N N N N N N 3.622 0.689 0.056 1.862 -1.227 2.524 H2 W9X 34
W9X H3 H3 H 0 1 N N N N N N 2.239 -0.439 0.258 0.546 -1.523 1.363 H3 W9X 35
W9X H4 H4 H 0 1 N N N N N N 3.817 -1.051 -0.341 1.330 -2.891 2.187 H4 W9X 36
W9X H5 H5 H 0 1 N N N N N N 7.124 -6.196 -2.783 0.597 5.100 2.329 H5 W9X 37
W9X H6 H6 H 0 1 N N N N N N 5.594 -6.749 -2.021 1.975 5.594 1.317 H6 W9X 38
W9X H7 H7 H 0 1 N N N N N N 5.702 -6.590 -3.807 0.326 5.619 0.648 H7 W9X 39
W9X H8 H8 H 0 1 N N N N N N 2.141 -4.893 -2.932 3.383 3.539 2.887 H8 W9X 40
W9X H9 H9 H 0 1 N N N N N N 3.286 -6.049 -3.692 4.440 3.314 1.473 H9 W9X 41
W9X H10 H10 H 0 1 N N N N N N 3.121 -5.992 -1.904 3.434 4.776 1.608 H10 W9X 42
W9X H11 H11 H 0 1 N N N N N N 10.845 -0.951 -2.941 -1.733 -0.123 0.872 H11 W9X 43
W9X H12 H12 H 0 1 N N N N N N 10.889 -0.800 -1.152 -2.886 1.075 1.524 H12 W9X 44
W9X H13 H13 H 0 1 N N N N N N 9.279 -2.837 -0.022 -4.826 1.731 -0.321 H13 W9X 45
W9X H14 H14 H 0 1 N N N N N N 7.847 -3.219 -1.037 -4.310 1.523 -2.013 H14 W9X 46
W9X H15 H15 H 0 1 N N N N N N 7.190 1.286 -2.534 -1.129 -1.491 -2.040 H15 W9X 47
W9X H16 H16 H 0 1 N N N N N N 5.827 1.542 -3.396 0.343 -2.232 -1.713 H16 W9X 48
W9X H17 H17 H 0 1 N N N N N N -0.081 1.138 -3.373 5.189 -3.804 -0.317 H17 W9X 49
W9X H18 H18 H 0 1 N N N N N N 4.480 0.921 -5.485 2.662 -0.678 -3.404 H18 W9X 50
W9X H19 H19 H 0 1 N N N N N N 4.662 -0.836 -5.155 2.873 0.694 -2.291 H19 W9X 51
W9X H20 H20 H 0 1 N N N N N N 3.341 -0.255 -6.225 4.296 -0.090 -3.018 H20 W9X 52
W9X H21 H21 H 0 1 N N N N N N 1.088 0.639 -0.136 3.045 -4.640 1.602 H21 W9X 53
W9X H22 H22 H 0 1 N N N N N N 9.236 -4.574 -2.542 -6.138 -0.089 -1.171 H22 W9X 54
W9X H23 H23 H 0 1 N N N N N N 9.487 -5.129 -0.852 -4.723 -0.840 -1.950 H23 W9X 55
W9X H24 H24 H 0 1 N N N N N N 13.509 -1.914 -2.040 -3.145 -1.785 2.810 H24 W9X 56
W9X H25 H25 H 0 1 N N N N N N 14.179 -4.485 -1.943 -5.280 -3.329 2.375 H25 W9X 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
W9X C18 C12 SING N N 1
W9X C13 C12 DOUB Y N 2
W9X C13 C14 SING Y N 3
W9X C12 C11 SING Y N 4
W9X C14 C15 DOUB Y N 5
W9X C11 N7 SING N N 6
W9X C11 C16 DOUB Y N 7
W9X C20 C2 SING N N 8
W9X N4 C3 DOUB Y N 9
W9X N4 C5 SING Y N 10
W9X C21 C3 SING N N 11
W9X C3 C2 SING Y N 12
W9X C2 N1 DOUB Y N 13
W9X N7 C5 SING Y N 14
W9X N7 C8 SING Y N 15
W9X C5 C6 DOUB Y N 16
W9X C6 N1 SING Y N 17
W9X C6 C9 SING Y N 18
W9X C8 N10 SING N N 19
W9X C8 C9 DOUB Y N 20
W9X C9 C22 SING N N 21
W9X O32 C22 DOUB N N 22
W9X C22 N23 SING N N 23
W9X C24 N23 SING N N 24
W9X C24 C25 SING N N 25
W9X C15 C16 SING Y N 26
W9X C15 O19 SING N N 27
W9X C29 C25 DOUB Y N 28
W9X C29 C30 SING Y N 29
W9X N23 C28 SING N N 30
W9X C25 N26 SING Y N 31
W9X C30 N31 DOUB Y N 32
W9X C16 C17 SING N N 33
W9X N31 N26 SING Y N 34
W9X N26 C27 SING N N 35
W9X C27 C28 SING N N 36
W9X C13 H1 SING N N 37
W9X C17 H2 SING N N 38
W9X C17 H3 SING N N 39
W9X C17 H4 SING N N 40
W9X C20 H5 SING N N 41
W9X C20 H6 SING N N 42
W9X C20 H7 SING N N 43
W9X C21 H8 SING N N 44
W9X C21 H9 SING N N 45
W9X C21 H10 SING N N 46
W9X C24 H11 SING N N 47
W9X C24 H12 SING N N 48
W9X C28 H13 SING N N 49
W9X C28 H14 SING N N 50
W9X N10 H15 SING N N 51
W9X N10 H16 SING N N 52
W9X C14 H17 SING N N 53
W9X C18 H18 SING N N 54
W9X C18 H19 SING N N 55
W9X C18 H20 SING N N 56
W9X O19 H21 SING N N 57
W9X C27 H22 SING N N 58
W9X C27 H23 SING N N 59
W9X C29 H24 SING N N 60
W9X C30 H25 SING N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
W9X InChI InChI 1.06 "InChI=1S/C23H25N7O2/c1-12-5-6-17(31)13(2)20(12)30-21(24)18(19-22(30)27-15(4)14(3)26-19)23(32)28-9-10-29-16(11-28)7-8-25-29/h5-8,31H,9-11,24H2,1-4H3"
W9X InChIKey InChI 1.06 BGGQMRVFAYRPSL-UHFFFAOYSA-N
W9X SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(O)c(C)c1n2c(N)c(C(=O)N3CCn4nccc4C3)c5nc(C)c(C)nc25"
W9X SMILES CACTVS 3.385 "Cc1ccc(O)c(C)c1n2c(N)c(C(=O)N3CCn4nccc4C3)c5nc(C)c(C)nc25"
W9X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1n2c(c(c3c2nc(c(n3)C)C)C(=O)N4CCn5c(ccn5)C4)N)C)O"
W9X SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1n2c(c(c3c2nc(c(n3)C)C)C(=O)N4CCn5c(ccn5)C4)N)C)O"
#
_pdbx_chem_comp_identifier.comp_id W9X
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "[6-azanyl-5-(2,6-dimethyl-3-oxidanyl-phenyl)-2,3-dimethyl-pyrrolo[2,3-b]pyrazin-7-yl]-(6,7-dihydro-4~{H}-pyrazolo[1,5-a]pyrazin-5-yl)methanone"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
W9X "Create component" 2023-09-29 PDBC
W9X "Initial release" 2023-11-22 RCSB
#