data_WBD # _chem_comp.id WBD _chem_comp.name "2,5-dichloro-1H-benzimidazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H4 Cl2 N2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-07 _chem_comp.pdbx_modified_date 2020-12-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 187.026 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WBD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KBG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WBD C1 C1 C 0 1 Y N N 64.399 32.759 -37.509 -0.108 0.427 0.004 C1 WBD 1 WBD C2 C2 C 0 1 Y N N 63.213 34.636 -37.333 -2.260 0.112 -0.002 C2 WBD 2 WBD C3 C3 C 0 1 Y N N 65.282 31.705 -37.784 1.201 0.916 0.003 C3 WBD 3 WBD C4 C4 C 0 1 Y N N 65.014 30.541 -37.121 2.260 0.035 0.000 C4 WBD 4 WBD C5 C5 C 0 1 Y N N 63.962 30.378 -36.213 2.036 -1.336 -0.002 C5 WBD 5 WBD N1 N1 N 0 1 Y N N 62.578 33.826 -36.498 -1.701 -1.129 0.003 N1 WBD 6 WBD C6 C6 C 0 1 Y N N 63.101 31.426 -35.946 0.750 -1.833 -0.001 C6 WBD 7 WBD CL1 CL1 CL 0 0 N N N 65.992 29.160 -37.467 3.886 0.642 -0.001 CL1 WBD 8 WBD C C7 C 0 1 Y N N 63.311 32.627 -36.596 -0.329 -0.960 0.002 C WBD 9 WBD CL CL2 CL 0 0 N N N 62.788 36.197 -37.646 -3.966 0.434 -0.002 CL WBD 10 WBD N N2 N 0 1 Y N N 64.330 34.055 -37.980 -1.329 1.023 0.001 N WBD 11 WBD H1 H1 H 0 1 N N N 66.111 31.806 -38.468 1.382 1.980 0.004 H1 WBD 12 WBD H2 H2 H 0 1 N N N 63.822 29.428 -35.718 2.874 -2.016 -0.005 H2 WBD 13 WBD H3 H3 H 0 1 N N N 61.774 34.019 -35.935 -2.176 -1.974 0.008 H3 WBD 14 WBD H4 H4 H 0 1 N N N 62.286 31.309 -35.248 0.582 -2.900 -0.003 H4 WBD 15 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WBD N C1 SING Y N 1 WBD N C2 DOUB Y N 2 WBD C3 C1 DOUB Y N 3 WBD C3 C4 SING Y N 4 WBD CL C2 SING N N 5 WBD C1 C SING Y N 6 WBD CL1 C4 SING N N 7 WBD C2 N1 SING Y N 8 WBD C4 C5 DOUB Y N 9 WBD C N1 SING Y N 10 WBD C C6 DOUB Y N 11 WBD C5 C6 SING Y N 12 WBD C3 H1 SING N N 13 WBD C5 H2 SING N N 14 WBD N1 H3 SING N N 15 WBD C6 H4 SING N N 16 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WBD SMILES ACDLabs 12.01 "c21c(nc(Cl)n1)ccc(c2)Cl" WBD InChI InChI 1.03 "InChI=1S/C7H4Cl2N2/c8-4-1-2-5-6(3-4)11-7(9)10-5/h1-3H,(H,10,11)" WBD InChIKey InChI 1.03 LLIARSREYVCQHL-UHFFFAOYSA-N WBD SMILES_CANONICAL CACTVS 3.385 "Clc1[nH]c2ccc(Cl)cc2n1" WBD SMILES CACTVS 3.385 "Clc1[nH]c2ccc(Cl)cc2n1" WBD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)nc([nH]2)Cl" WBD SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)nc([nH]2)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WBD "SYSTEMATIC NAME" ACDLabs 12.01 "2,5-dichloro-1H-benzimidazole" WBD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2,5-bis(chloranyl)-1~{H}-benzimidazole" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WBD "Create component" 2020-10-07 RCSB WBD "Initial release" 2020-12-30 RCSB ##