data_WC3 # _chem_comp.id WC3 _chem_comp.name "2-[2-(3,5-dimethylpyrazol-1-yl)-6-(4-methoxyphenyl)pyrimidin-4-yl]oxy-N-methyl-N-[(2-methylpyridin-3-yl)methyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H28 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-10 _chem_comp.pdbx_modified_date 2024-08-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.539 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WC3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P0I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WC3 C13 C1 C 0 1 N N N N N N 29.201 33.914 6.073 -1.768 0.221 -0.703 C13 WC3 1 WC3 C15 C2 C 0 1 Y N N N N N 27.020 34.171 7.070 0.547 -0.208 -0.399 C15 WC3 2 WC3 C17 C3 C 0 1 Y N N N N N 26.667 34.396 9.409 2.902 -0.487 -0.083 C17 WC3 3 WC3 C20 C4 C 0 1 Y N N N N N 28.712 33.645 12.592 6.475 -1.567 0.349 C20 WC3 4 WC3 C21 C5 C 0 1 Y N N N N N 27.628 33.454 13.485 6.357 -2.946 0.233 C21 WC3 5 WC3 C24 C6 C 0 1 Y N N N N N 26.296 33.591 13.062 5.114 -3.523 0.009 C24 WC3 6 WC3 C02 C7 C 0 1 N N N N N N 29.609 32.448 6.032 -3.058 -0.519 -0.947 C02 WC3 7 WC3 C04 C8 C 0 1 N N N N N N 31.297 32.373 8.047 -4.218 1.624 -0.954 C04 WC3 8 WC3 C05 C9 C 0 1 N N N N N N 30.680 30.286 6.822 -5.469 -0.557 -1.301 C05 WC3 9 WC3 C06 C10 C 0 1 Y N N N N N 31.918 29.832 6.083 -6.154 -0.818 0.016 C06 WC3 10 WC3 C07 C11 C 0 1 Y N N N N N 32.769 30.742 5.448 -5.633 -0.304 1.193 C07 WC3 11 WC3 C08 C12 C 0 1 Y N N N N N 33.886 30.238 4.786 -6.297 -0.570 2.381 C08 WC3 12 WC3 C09 C13 C 0 1 Y N N N N N 34.088 28.864 4.799 -7.449 -1.333 2.351 C09 WC3 13 WC3 C11 C14 C 0 1 Y N N N N N 32.184 28.469 6.054 -7.314 -1.568 0.064 C11 WC3 14 WC3 C12 C15 C 0 1 N N N N N N 31.248 27.449 6.744 -7.894 -2.126 -1.211 C12 WC3 15 WC3 C16 C16 C 0 1 Y N N N N N 27.278 33.740 8.370 1.648 -1.054 -0.302 C16 WC3 16 WC3 C18 C17 C 0 1 Y N N N N N 27.008 34.016 10.852 4.107 -1.344 0.027 C18 WC3 17 WC3 C19 C18 C 0 1 Y N N N N N 28.376 33.956 11.262 5.357 -0.767 0.247 C19 WC3 18 WC3 C23 C19 C 0 1 N N N N N N 27.022 32.004 15.313 7.266 -5.142 0.210 C23 WC3 19 WC3 C25 C20 C 0 1 Y N N N N N 25.978 33.898 11.760 3.993 -2.728 -0.099 C25 WC3 20 WC3 C27 C21 C 0 1 Y N N N N N 25.560 35.757 7.932 1.933 1.607 -0.071 C27 WC3 21 WC3 C29 C22 C 0 1 Y N N N N N 23.253 36.282 8.371 1.080 3.909 -0.027 C29 WC3 22 WC3 C30 C23 C 0 1 N N N N N N 22.784 35.072 9.224 -0.381 3.621 -0.256 C30 WC3 23 WC3 C31 C24 C 0 1 Y N N N N N 22.305 37.220 8.096 1.636 5.130 0.145 C31 WC3 24 WC3 C32 C25 C 0 1 Y N N N N N 22.896 38.183 7.315 3.013 4.957 0.326 C32 WC3 25 WC3 C33 C26 C 0 1 N N N N N N 22.232 39.455 6.782 4.018 6.056 0.553 C33 WC3 26 WC3 N03 N1 N 0 1 N N N N N N 30.537 31.733 6.972 -4.215 0.163 -1.064 N03 WC3 27 WC3 N10 N2 N 0 1 Y N N N N N 33.252 28.044 5.416 -7.916 -1.806 1.212 N10 WC3 28 WC3 N26 N3 N 0 1 Y N N N N N 25.826 35.346 9.155 3.003 0.838 0.026 N26 WC3 29 WC3 N28 N4 N 0 1 Y N N N N N 24.442 36.680 7.829 2.078 2.990 0.049 N28 WC3 30 WC3 N34 N5 N 0 1 Y N N N N N 24.172 37.817 7.112 3.279 3.678 0.266 N34 WC3 31 WC3 N35 N6 N 0 1 Y N N N N N 26.138 35.156 6.881 0.727 1.103 -0.279 N35 WC3 32 WC3 O01 O1 O 0 1 N N N N N N 28.958 31.919 5.162 -3.055 -1.728 -1.038 O01 WC3 33 WC3 O14 O2 O 0 1 N N N N N N 27.774 33.571 6.028 -0.691 -0.714 -0.617 O14 WC3 34 WC3 O22 O3 O 0 1 N N N N N N 27.776 33.127 14.860 7.460 -3.732 0.339 O22 WC3 35 WC3 H131 H1 H 0 0 N N N N N N 29.544 34.492 5.202 -1.585 0.912 -1.526 H131 WC3 36 WC3 H132 H2 H 0 0 N N N N N N 29.502 34.430 6.997 -1.840 0.779 0.230 H132 WC3 37 WC3 H201 H3 H 0 0 N N N N N N 29.739 33.557 12.915 7.443 -1.122 0.523 H201 WC3 38 WC3 H241 H4 H 0 0 N N N N N N 25.500 33.451 13.779 5.025 -4.596 -0.081 H241 WC3 39 WC3 H043 H5 H 0 0 N N N N N N 31.893 31.615 8.577 -3.976 2.062 -1.923 H043 WC3 40 WC3 H041 H6 H 0 0 N N N N N N 31.967 33.134 7.620 -5.205 1.962 -0.639 H041 WC3 41 WC3 H042 H7 H 0 0 N N N N N N 30.602 32.851 8.753 -3.475 1.935 -0.219 H042 WC3 42 WC3 H052 H8 H 0 0 N N N N N N 29.802 29.913 6.275 -5.255 -1.505 -1.794 H052 WC3 43 WC3 H051 H9 H 0 0 N N N N N N 30.702 29.841 7.828 -6.118 0.045 -1.936 H051 WC3 44 WC3 H071 H10 H 0 0 N N N N N N 32.566 31.803 5.470 -4.730 0.289 1.185 H071 WC3 45 WC3 H081 H11 H 0 0 N N N N N N 34.575 30.896 4.278 -5.919 -0.186 3.316 H081 WC3 46 WC3 H091 H12 H 0 0 N N N N N N 34.949 28.454 4.293 -7.972 -1.545 3.272 H091 WC3 47 WC3 H121 H13 H 0 0 N N N N N N 31.638 26.432 6.592 -7.408 -3.073 -1.446 H121 WC3 48 WC3 H123 H14 H 0 0 N N N N N N 31.200 27.666 7.821 -8.964 -2.289 -1.082 H123 WC3 49 WC3 H122 H15 H 0 0 N N N N N N 30.240 27.524 6.309 -7.728 -1.420 -2.024 H122 WC3 50 WC3 H161 H16 H 0 0 N N N N N N 27.943 32.909 8.555 1.533 -2.124 -0.395 H161 WC3 51 WC3 H191 H17 H 0 0 N N N N N N 29.159 34.151 10.544 5.448 0.304 0.345 H191 WC3 52 WC3 H233 H18 H 0 0 N N N N N N 27.211 31.843 16.385 6.585 -5.488 0.987 H233 WC3 53 WC3 H232 H19 H 0 0 N N N N N N 25.950 32.194 15.155 6.842 -5.363 -0.770 H232 WC3 54 WC3 H231 H20 H 0 0 N N N N N N 27.323 31.109 14.749 8.224 -5.651 0.314 H231 WC3 55 WC3 H251 H21 H 0 0 N N N N N N 24.951 34.042 11.458 3.026 -3.178 -0.269 H251 WC3 56 WC3 H302 H22 H 0 0 N N N N N N 22.916 35.302 10.292 -0.590 3.628 -1.326 H302 WC3 57 WC3 H301 H23 H 0 0 N N N N N N 21.722 34.870 9.021 -0.627 2.641 0.155 H301 WC3 58 WC3 H303 H24 H 0 0 N N N N N N 23.382 34.186 8.963 -0.984 4.383 0.237 H303 WC3 59 WC3 H311 H25 H 0 0 N N N N N N 21.278 37.209 8.430 1.109 6.073 0.142 H311 WC3 60 WC3 H331 H26 H 0 0 N N N N N N 22.963 40.035 6.200 4.117 6.244 1.622 H331 WC3 61 WC3 H333 H27 H 0 0 N N N N N N 21.383 39.183 6.138 4.984 5.756 0.147 H333 WC3 62 WC3 H332 H28 H 0 0 N N N N N N 21.872 40.062 7.626 3.681 6.965 0.055 H332 WC3 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WC3 C08 C09 DOUB Y N 1 WC3 C08 C07 SING Y N 2 WC3 C09 N10 SING Y N 3 WC3 O01 C02 DOUB N N 4 WC3 N10 C11 DOUB Y N 5 WC3 C07 C06 DOUB Y N 6 WC3 O14 C13 SING N N 7 WC3 O14 C15 SING N N 8 WC3 C02 C13 SING N N 9 WC3 C02 N03 SING N N 10 WC3 C11 C06 SING Y N 11 WC3 C11 C12 SING N N 12 WC3 C06 C05 SING N N 13 WC3 C33 C32 SING N N 14 WC3 C05 N03 SING N N 15 WC3 N35 C15 DOUB Y N 16 WC3 N35 C27 SING Y N 17 WC3 N03 C04 SING N N 18 WC3 C15 C16 SING Y N 19 WC3 N34 C32 DOUB Y N 20 WC3 N34 N28 SING Y N 21 WC3 C32 C31 SING Y N 22 WC3 N28 C27 SING N N 23 WC3 N28 C29 SING Y N 24 WC3 C27 N26 DOUB Y N 25 WC3 C31 C29 DOUB Y N 26 WC3 C16 C17 DOUB Y N 27 WC3 C29 C30 SING N N 28 WC3 N26 C17 SING Y N 29 WC3 C17 C18 SING N N 30 WC3 C18 C19 DOUB Y N 31 WC3 C18 C25 SING Y N 32 WC3 C19 C20 SING Y N 33 WC3 C25 C24 DOUB Y N 34 WC3 C20 C21 DOUB Y N 35 WC3 C24 C21 SING Y N 36 WC3 C21 O22 SING N N 37 WC3 O22 C23 SING N N 38 WC3 C13 H131 SING N N 39 WC3 C13 H132 SING N N 40 WC3 C20 H201 SING N N 41 WC3 C24 H241 SING N N 42 WC3 C04 H043 SING N N 43 WC3 C04 H041 SING N N 44 WC3 C04 H042 SING N N 45 WC3 C05 H052 SING N N 46 WC3 C05 H051 SING N N 47 WC3 C07 H071 SING N N 48 WC3 C08 H081 SING N N 49 WC3 C09 H091 SING N N 50 WC3 C12 H121 SING N N 51 WC3 C12 H123 SING N N 52 WC3 C12 H122 SING N N 53 WC3 C16 H161 SING N N 54 WC3 C19 H191 SING N N 55 WC3 C23 H233 SING N N 56 WC3 C23 H232 SING N N 57 WC3 C23 H231 SING N N 58 WC3 C25 H251 SING N N 59 WC3 C30 H302 SING N N 60 WC3 C30 H301 SING N N 61 WC3 C30 H303 SING N N 62 WC3 C31 H311 SING N N 63 WC3 C33 H331 SING N N 64 WC3 C33 H333 SING N N 65 WC3 C33 H332 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WC3 InChI InChI 1.06 "InChI=1S/C26H28N6O3/c1-17-13-18(2)32(30-17)26-28-23(20-8-10-22(34-5)11-9-20)14-24(29-26)35-16-25(33)31(4)15-21-7-6-12-27-19(21)3/h6-14H,15-16H2,1-5H3" WC3 InChIKey InChI 1.06 VJEOBRGFUNEYOH-UHFFFAOYSA-N WC3 SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1)c2cc(OCC(=O)N(C)Cc3cccnc3C)nc(n2)n4nc(C)cc4C" WC3 SMILES CACTVS 3.385 "COc1ccc(cc1)c2cc(OCC(=O)N(C)Cc3cccnc3C)nc(n2)n4nc(C)cc4C" WC3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(n(n1)c2nc(cc(n2)OCC(=O)N(C)Cc3cccnc3C)c4ccc(cc4)OC)C" WC3 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(n(n1)c2nc(cc(n2)OCC(=O)N(C)Cc3cccnc3C)c4ccc(cc4)OC)C" # _pdbx_chem_comp_identifier.comp_id WC3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-(3,5-dimethylpyrazol-1-yl)-6-(4-methoxyphenyl)pyrimidin-4-yl]oxy-~{N}-methyl-~{N}-[(2-methylpyridin-3-yl)methyl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WC3 "Create component" 2023-05-10 PDBE WC3 "Initial release" 2024-09-04 RCSB #