data_WCX # _chem_comp.id WCX _chem_comp.name "4-{5-[(1-METHYLPIPERIDIN-4-YL)OXY]-1H-BENZIMIDAZOL-1-YL}-2-{(1R)-1-[2-(TRIFLUOROMETHYL)PHENYL]ETHOXY}BENZAMIDE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H29 F3 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-08-05 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 538.561 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WCX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2XNP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WCX C01 C01 C 0 1 N N N -26.838 -1.251 13.649 -3.082 -0.832 -1.922 C01 WCX 1 WCX C02 C02 C 0 1 N N R -26.311 -1.848 14.974 -3.733 -0.323 -0.634 C02 WCX 2 WCX O03 O03 O 0 1 N N N -25.088 -2.487 14.688 -3.667 1.104 -0.598 O03 WCX 3 WCX C04 C04 C 0 1 Y N N -24.563 -3.405 15.623 -2.530 1.656 -0.107 C04 WCX 4 WCX C05 C05 C 0 1 Y N N -25.316 -3.706 16.875 -1.455 0.850 0.231 C05 WCX 5 WCX C06 C06 C 0 1 Y N N -24.699 -4.634 17.867 -0.294 1.421 0.733 C06 WCX 6 WCX N09 N09 N 0 1 Y N N -26.041 -6.028 20.839 1.942 -1.018 1.965 N09 WCX 7 WCX C08 C08 C 0 1 Y N N -25.347 -6.162 19.596 0.751 -0.507 1.855 C08 WCX 8 WCX N07 N07 N 0 1 Y N N -25.309 -4.902 19.031 0.790 0.609 1.073 N07 WCX 9 WCX C23 C23 C 0 1 Y N N -25.962 -3.974 19.869 2.106 0.786 0.679 C23 WCX 10 WCX C22 C22 C 0 1 Y N N -26.219 -2.510 19.745 2.758 1.726 -0.107 C22 WCX 11 WCX C21 C21 C 0 1 Y N N -26.936 -1.818 20.804 4.116 1.624 -0.316 C21 WCX 12 WCX C12 C12 C 0 1 Y N N -27.388 -2.592 21.942 4.840 0.582 0.257 C12 WCX 13 WCX O13 O13 O 0 1 N N N -28.081 -1.969 23.003 6.180 0.492 0.042 O13 WCX 14 WCX C14 C14 C 0 1 N N N -29.085 -2.844 23.523 6.884 -0.529 0.752 C14 WCX 15 WCX C15 C15 C 0 1 N N N -30.422 -2.105 23.774 8.356 -0.134 0.890 C15 WCX 16 WCX C16 C16 C 0 1 N N N -30.189 -0.755 24.493 8.982 -0.020 -0.502 C16 WCX 17 WCX N17 N17 N 0 1 N N N -29.336 -0.850 25.692 8.865 -1.307 -1.199 N17 WCX 18 WCX C18 C18 C 0 1 N N N -29.085 0.406 26.442 9.577 -1.275 -2.484 C18 WCX 19 WCX C19 C19 C 0 1 N N N -28.069 -1.613 25.485 7.458 -1.684 -1.385 C19 WCX 20 WCX C20 C20 C 0 1 N N N -28.315 -3.017 24.853 6.788 -1.848 -0.020 C20 WCX 21 WCX C11 C11 C 0 1 Y N N -27.143 -4.020 22.061 4.206 -0.361 1.041 C11 WCX 22 WCX C10 C10 C 0 1 Y N N -26.427 -4.707 20.976 2.829 -0.268 1.261 C10 WCX 23 WCX C24 C24 C 0 1 Y N N -23.402 -5.264 17.624 -0.206 2.801 0.899 C24 WCX 24 WCX C25 C25 C 0 1 Y N N -22.672 -4.971 16.360 -1.259 3.605 0.570 C25 WCX 25 WCX C26 C26 C 0 1 Y N N -23.252 -4.038 15.366 -2.434 3.046 0.058 C26 WCX 26 WCX C27 C27 C 0 1 N N N -22.435 -3.767 14.076 -3.569 3.913 -0.304 C27 WCX 27 WCX N28 N28 N 0 1 N N N -22.950 -2.895 13.017 -3.474 5.248 -0.145 N28 WCX 28 WCX O29 O29 O 0 1 N N N -21.393 -4.308 13.957 -4.591 3.424 -0.745 O29 WCX 29 WCX C30 C30 C 0 1 Y N N -26.046 -0.724 16.012 -5.174 -0.761 -0.593 C30 WCX 30 WCX C31 C31 C 0 1 Y N N -24.743 -0.060 16.046 -6.168 0.090 -1.040 C31 WCX 31 WCX C32 C32 C 0 1 Y N N -24.516 1.009 17.007 -7.490 -0.312 -1.003 C32 WCX 32 WCX C33 C33 C 0 1 Y N N -25.593 1.416 17.945 -7.819 -1.564 -0.518 C33 WCX 33 WCX C34 C34 C 0 1 Y N N -26.924 0.748 17.905 -6.825 -2.415 -0.072 C34 WCX 34 WCX C35 C35 C 0 1 Y N N -27.146 -0.294 16.954 -5.503 -2.015 -0.114 C35 WCX 35 WCX C36 C36 C 0 1 N N N -28.536 -0.997 16.911 -4.419 -2.945 0.368 C36 WCX 36 WCX F39 F39 F 0 1 N N N -29.113 -0.909 15.658 -3.529 -3.206 -0.679 F39 WCX 37 WCX F38 F38 F 0 1 N N N -28.399 -2.304 17.272 -3.729 -2.348 1.429 F38 WCX 38 WCX F37 F37 F 0 1 N N N -29.335 -0.383 17.809 -4.993 -4.145 0.802 F37 WCX 39 WCX H011 H011 H 0 0 N N N -26.963 -0.164 13.760 -2.040 -0.515 -1.952 H011 WCX 40 WCX H012 H012 H 0 0 N N N -26.119 -1.456 12.843 -3.132 -1.920 -1.950 H012 WCX 41 WCX H013 H013 H 0 0 N N N -27.807 -1.708 13.401 -3.611 -0.422 -2.783 H013 WCX 42 WCX H02 H02 H 0 1 N N N -27.052 -2.546 15.390 -3.204 -0.733 0.226 H02 WCX 43 WCX H05 H05 H 0 1 N N N -26.284 -3.263 17.059 -1.520 -0.220 0.103 H05 WCX 44 WCX H24 H24 H 0 1 N N N -22.977 -5.936 18.355 0.701 3.238 1.291 H24 WCX 45 WCX H08 H08 H 0 1 N N N -24.934 -7.069 19.181 -0.139 -0.908 2.317 H08 WCX 46 WCX H11 H11 H 0 1 N N N -27.480 -4.566 22.930 4.772 -1.168 1.483 H11 WCX 47 WCX H21 H21 H 0 1 N N N -27.126 -0.757 20.744 4.622 2.356 -0.928 H21 WCX 48 WCX H14 H14 H 0 1 N N N -29.387 -3.721 22.932 6.445 -0.653 1.742 H14 WCX 49 WCX H151 H151 H 0 0 N N N -30.910 -1.914 22.807 8.429 0.826 1.402 H151 WCX 50 WCX H152 H152 H 0 0 N N N -31.055 -2.737 24.414 8.885 -0.894 1.465 H152 WCX 51 WCX H201 H201 H 0 0 N N N -28.907 -3.635 25.545 7.291 -2.635 0.541 H201 WCX 52 WCX H202 H202 H 0 0 N N N -27.351 -3.512 24.662 5.739 -2.113 -0.159 H202 WCX 53 WCX H161 H161 H 0 0 N N N -29.700 -0.072 23.782 8.462 0.751 -1.071 H161 WCX 54 WCX H162 H162 H 0 0 N N N -31.174 -0.398 24.829 10.034 0.248 -0.406 H162 WCX 55 WCX H181 H181 H 0 0 N N N -29.023 0.185 27.518 10.632 -1.067 -2.310 H181 WCX 56 WCX H182 H182 H 0 0 N N N -28.138 0.852 26.104 9.474 -2.241 -2.980 H182 WCX 57 WCX H183 H183 H 0 0 N N N -29.908 1.112 26.260 9.152 -0.496 -3.116 H183 WCX 58 WCX H191 H191 H 0 0 N N N -27.421 -1.035 24.810 6.946 -0.906 -1.951 H191 WCX 59 WCX H192 H192 H 0 0 N N N -27.603 -1.765 26.470 7.404 -2.625 -1.932 H192 WCX 60 WCX H22 H22 H 0 1 N N N -25.875 -1.968 18.876 2.201 2.536 -0.554 H22 WCX 61 WCX H25 H25 H 0 1 N N N -21.718 -5.439 16.167 -1.184 4.674 0.702 H25 WCX 62 WCX H281 H281 H 0 0 N N N -22.254 -2.876 12.299 -2.659 5.638 0.207 H281 WCX 63 WCX H282 H282 H 0 0 N N N -23.826 -2.413 13.013 -4.222 5.819 -0.383 H282 WCX 64 WCX H31 H31 H 0 1 N N N -23.959 -0.359 15.366 -5.911 1.068 -1.419 H31 WCX 65 WCX H32 H32 H 0 1 N N N -23.559 1.509 17.038 -8.267 0.353 -1.351 H32 WCX 66 WCX H33 H33 H 0 1 N N N -25.410 2.203 18.662 -8.852 -1.877 -0.488 H33 WCX 67 WCX H34 H34 H 0 1 N N N -27.709 1.047 18.584 -7.082 -3.393 0.307 H34 WCX 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WCX C01 C02 SING N N 1 WCX C02 O03 SING N N 2 WCX C02 C30 SING N N 3 WCX O03 C04 SING N N 4 WCX C04 C05 SING Y N 5 WCX C04 C26 DOUB Y N 6 WCX C05 C06 DOUB Y N 7 WCX C06 N07 SING Y N 8 WCX C06 C24 SING Y N 9 WCX N07 C08 SING Y N 10 WCX N07 C23 SING Y N 11 WCX C08 N09 DOUB Y N 12 WCX N09 C10 SING Y N 13 WCX C10 C11 SING Y N 14 WCX C10 C23 DOUB Y N 15 WCX C11 C12 DOUB Y N 16 WCX C12 O13 SING N N 17 WCX C12 C21 SING Y N 18 WCX O13 C14 SING N N 19 WCX C14 C15 SING N N 20 WCX C14 C20 SING N N 21 WCX C15 C16 SING N N 22 WCX C16 N17 SING N N 23 WCX N17 C18 SING N N 24 WCX N17 C19 SING N N 25 WCX C19 C20 SING N N 26 WCX C21 C22 DOUB Y N 27 WCX C22 C23 SING Y N 28 WCX C24 C25 DOUB Y N 29 WCX C25 C26 SING Y N 30 WCX C26 C27 SING N N 31 WCX C27 N28 SING N N 32 WCX C27 O29 DOUB N N 33 WCX C30 C31 DOUB Y N 34 WCX C30 C35 SING Y N 35 WCX C31 C32 SING Y N 36 WCX C32 C33 DOUB Y N 37 WCX C33 C34 SING Y N 38 WCX C34 C35 DOUB Y N 39 WCX C35 C36 SING N N 40 WCX C36 F37 SING N N 41 WCX C36 F38 SING N N 42 WCX C36 F39 SING N N 43 WCX C01 H011 SING N N 44 WCX C01 H012 SING N N 45 WCX C01 H013 SING N N 46 WCX C02 H02 SING N N 47 WCX C05 H05 SING N N 48 WCX C24 H24 SING N N 49 WCX C08 H08 SING N N 50 WCX C11 H11 SING N N 51 WCX C21 H21 SING N N 52 WCX C14 H14 SING N N 53 WCX C15 H151 SING N N 54 WCX C15 H152 SING N N 55 WCX C20 H201 SING N N 56 WCX C20 H202 SING N N 57 WCX C16 H161 SING N N 58 WCX C16 H162 SING N N 59 WCX C18 H181 SING N N 60 WCX C18 H182 SING N N 61 WCX C18 H183 SING N N 62 WCX C19 H191 SING N N 63 WCX C19 H192 SING N N 64 WCX C22 H22 SING N N 65 WCX C25 H25 SING N N 66 WCX N28 H281 SING N N 67 WCX N28 H282 SING N N 68 WCX C31 H31 SING N N 69 WCX C32 H32 SING N N 70 WCX C33 H33 SING N N 71 WCX C34 H34 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WCX SMILES ACDLabs 10.04 "FC(F)(F)c1ccccc1C(Oc2c(C(=O)N)ccc(c2)n4c5ccc(OC3CCN(C)CC3)cc5nc4)C" WCX SMILES_CANONICAL CACTVS 3.352 "C[C@@H](Oc1cc(ccc1C(N)=O)n2cnc3cc(OC4CCN(C)CC4)ccc23)c5ccccc5C(F)(F)F" WCX SMILES CACTVS 3.352 "C[CH](Oc1cc(ccc1C(N)=O)n2cnc3cc(OC4CCN(C)CC4)ccc23)c5ccccc5C(F)(F)F" WCX SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C[C@H](c1ccccc1C(F)(F)F)Oc2cc(ccc2C(=O)N)n3cnc4c3ccc(c4)OC5CCN(CC5)C" WCX SMILES "OpenEye OEToolkits" 1.6.1 "CC(c1ccccc1C(F)(F)F)Oc2cc(ccc2C(=O)N)n3cnc4c3ccc(c4)OC5CCN(CC5)C" WCX InChI InChI 1.03 "InChI=1S/C29H29F3N4O3/c1-18(22-5-3-4-6-24(22)29(30,31)32)38-27-15-19(7-9-23(27)28(33)37)36-17-34-25-16-21(8-10-26(25)36)39-20-11-13-35(2)14-12-20/h3-10,15-18,20H,11-14H2,1-2H3,(H2,33,37)/t18-/m1/s1" WCX InChIKey InChI 1.03 FASALJZFFLCNKM-GOSISDBHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WCX "SYSTEMATIC NAME" ACDLabs 10.04 "4-{5-[(1-methylpiperidin-4-yl)oxy]-1H-benzimidazol-1-yl}-2-{(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy}benzamide" WCX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "4-[5-(1-methylpiperidin-4-yl)oxybenzimidazol-1-yl]-2-[(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WCX "Create component" 2010-08-05 EBI WCX "Modify aromatic_flag" 2011-06-04 RCSB WCX "Modify descriptor" 2011-06-04 RCSB #