data_WD4 # _chem_comp.id WD4 _chem_comp.name 1-cyclopropylimidazolidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H10 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-02 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 126.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WD4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FP0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WD4 N1 N1 N 0 1 N N N 38.103 13.497 44.146 1.864 0.812 0.119 N1 WD4 1 WD4 C1 C1 C 0 1 N N N 34.141 11.229 43.974 -2.318 -0.437 0.832 C1 WD4 2 WD4 C5 C2 C 0 1 N N N 36.801 13.946 44.245 0.532 0.752 -0.009 C5 WD4 3 WD4 C4 C3 C 0 1 N N N 38.038 12.120 43.699 2.415 -0.551 0.077 C4 WD4 4 WD4 C3 C4 C 0 1 N N N 36.855 11.625 44.550 1.173 -1.446 -0.100 C3 WD4 5 WD4 C2 C5 C 0 1 N N N 34.701 12.630 44.083 -1.359 -0.848 -0.288 C2 WD4 6 WD4 O O1 O 0 1 N N N 36.437 15.078 44.012 -0.178 1.738 -0.012 O WD4 7 WD4 N N2 N 0 1 N N N 36.001 12.829 44.628 0.054 -0.493 -0.133 N WD4 8 WD4 C C6 C 0 1 N N N 33.536 12.196 44.955 -2.354 0.293 -0.513 C WD4 9 WD4 H1 H1 H 0 1 N N N 38.931 14.021 44.345 2.383 1.625 0.220 H1 WD4 10 WD4 H2 H2 H 0 1 N N N 33.577 10.932 43.078 -3.143 -1.111 1.061 H2 WD4 11 WD4 H3 H3 H 0 1 N N N 34.728 10.373 44.338 -1.897 0.098 1.683 H3 WD4 12 WD4 H4 H4 H 0 1 N N N 37.825 12.049 42.622 3.092 -0.664 -0.770 H4 WD4 13 WD4 H5 H5 H 0 1 N N N 38.964 11.572 43.927 2.926 -0.786 1.010 H5 WD4 14 WD4 H6 H6 H 0 1 N N N 36.329 10.794 44.057 1.233 -2.004 -1.035 H6 WD4 15 WD4 H7 H7 H 0 1 N N N 37.188 11.307 45.549 1.067 -2.126 0.745 H7 WD4 16 WD4 H8 H8 H 0 1 N N N 34.420 13.296 43.254 -1.554 -1.793 -0.795 H8 WD4 17 WD4 H9 H9 H 0 1 N N N 32.531 12.606 44.774 -3.203 0.098 -1.168 H9 WD4 18 WD4 H10 H10 H 0 1 N N N 33.683 12.048 46.035 -1.957 1.307 -0.546 H10 WD4 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WD4 C4 N1 SING N N 1 WD4 C4 C3 SING N N 2 WD4 C1 C2 SING N N 3 WD4 C1 C SING N N 4 WD4 O C5 DOUB N N 5 WD4 C2 N SING N N 6 WD4 C2 C SING N N 7 WD4 N1 C5 SING N N 8 WD4 C5 N SING N N 9 WD4 C3 N SING N N 10 WD4 N1 H1 SING N N 11 WD4 C1 H2 SING N N 12 WD4 C1 H3 SING N N 13 WD4 C4 H4 SING N N 14 WD4 C4 H5 SING N N 15 WD4 C3 H6 SING N N 16 WD4 C3 H7 SING N N 17 WD4 C2 H8 SING N N 18 WD4 C H9 SING N N 19 WD4 C H10 SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WD4 SMILES ACDLabs 12.01 O=C1NCCN1C1CC1 WD4 InChI InChI 1.06 "InChI=1S/C6H10N2O/c9-6-7-3-4-8(6)5-1-2-5/h5H,1-4H2,(H,7,9)" WD4 InChIKey InChI 1.06 GWIBJFQSKXTOLP-UHFFFAOYSA-N WD4 SMILES_CANONICAL CACTVS 3.385 O=C1NCCN1C2CC2 WD4 SMILES CACTVS 3.385 O=C1NCCN1C2CC2 WD4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 C1CC1N2CCNC2=O WD4 SMILES "OpenEye OEToolkits" 2.0.7 C1CC1N2CCNC2=O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WD4 "SYSTEMATIC NAME" ACDLabs 12.01 1-cyclopropylimidazolidin-2-one WD4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 1-cyclopropylimidazolidin-2-one # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WD4 "Create component" 2022-09-02 RCSB WD4 "Initial release" 2022-11-02 RCSB #