data_WD7 # _chem_comp.id WD7 _chem_comp.name "N-{[2-(1,3-dimethyl-2-oxo-6-sulfanylidene-1,2,3,6-tetrahydro-7H-purin-7-yl)ethyl]carbamoyl}methanesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H16 N6 O4 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-15 _chem_comp.pdbx_modified_date 2021-03-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 360.413 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WD7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KFP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WD7 C20 C1 C 0 1 Y N N 26.257 2.469 0.884 2.503 0.527 -0.387 C20 WD7 1 WD7 C21 C2 C 0 1 N N N 25.098 1.628 1.354 2.590 -0.881 -0.405 C21 WD7 2 WD7 C01 C3 C 0 1 N N N 22.725 1.465 1.875 3.795 -2.941 0.061 C01 WD7 3 WD7 C03 C4 C 0 1 N N N 23.767 3.332 1.120 4.719 -0.754 0.569 C03 WD7 4 WD7 C05 C5 C 0 1 N N N 24.687 5.571 0.297 5.809 1.344 1.151 C05 WD7 5 WD7 C06 C6 C 0 1 Y N N 25.982 3.776 0.550 3.563 1.264 0.125 C06 WD7 6 WD7 C08 C7 C 0 1 Y N N 28.129 3.345 0.255 2.044 2.668 -0.509 C08 WD7 7 WD7 C10 C8 C 0 1 N N N 28.254 1.042 0.947 0.247 1.143 -1.381 C10 WD7 8 WD7 C11 C9 C 0 1 N N N 28.432 0.070 -0.208 -0.775 0.867 -0.277 C11 WD7 9 WD7 C13 C10 C 0 1 N N N 29.345 0.636 -2.389 -3.135 0.290 -0.093 C13 WD7 10 WD7 C16 C11 C 0 1 N N N 29.485 2.833 -5.501 -5.939 1.215 1.224 C16 WD7 11 WD7 N02 N1 N 0 1 N N N 23.875 2.227 1.424 3.700 -1.479 0.076 N02 WD7 12 WD7 N04 N2 N 0 1 N N N 24.944 4.176 0.637 4.677 0.591 0.605 N04 WD7 13 WD7 N07 N3 N 0 1 Y N N 27.189 4.317 0.160 3.232 2.554 0.027 N07 WD7 14 WD7 N09 N4 N 0 1 Y N N 27.523 2.299 0.661 1.549 1.443 -0.779 N09 WD7 15 WD7 N12 N5 N 0 1 N N N 29.600 0.523 -0.963 -2.076 0.567 -0.879 N12 WD7 16 WD7 N14 N6 N 0 1 N N N 30.320 1.058 -3.400 -4.332 0.014 -0.648 N14 WD7 17 WD7 O17 O1 O 0 1 N N N 28.400 0.406 -4.910 -5.161 -1.337 1.199 O17 WD7 18 WD7 O18 O2 O 0 1 N N N 30.444 0.277 -5.948 -6.690 -0.586 -0.595 O18 WD7 19 WD7 O19 O3 O 0 1 N N N 28.253 0.334 -2.697 -3.010 0.290 1.116 O19 WD7 20 WD7 O23 O4 O 0 1 N N N 22.706 3.888 1.173 5.703 -1.328 0.994 O23 WD7 21 WD7 S15 S1 S 0 1 N N N 29.688 1.085 -4.993 -5.633 -0.326 0.319 S15 WD7 22 WD7 S22 S2 S 0 1 N N N 25.325 0.077 1.744 1.302 -1.820 -1.029 S22 WD7 23 WD7 H013 H1 H 0 0 N N N 23.037 0.438 2.116 4.245 -3.266 -0.878 H013 WD7 24 WD7 H012 H2 H 0 0 N N N 22.300 1.939 2.772 4.414 -3.273 0.894 H012 WD7 25 WD7 H011 H3 H 0 0 N N N 21.966 1.441 1.079 2.798 -3.371 0.154 H011 WD7 26 WD7 H052 H4 H 0 0 N N N 23.619 5.793 0.439 5.664 1.493 2.220 H052 WD7 27 WD7 H053 H5 H 0 0 N N N 25.287 6.224 0.948 6.730 0.787 0.983 H053 WD7 28 WD7 H051 H6 H 0 0 N N N 24.961 5.749 -0.753 5.874 2.312 0.654 H051 WD7 29 WD7 H081 H7 H 0 0 N N N 29.182 3.438 0.031 1.535 3.601 -0.700 H081 WD7 30 WD7 H102 H8 H 0 0 N N N 27.709 0.515 1.744 0.337 0.265 -2.021 H102 WD7 31 WD7 H101 H9 H 0 0 N N N 29.256 1.316 1.308 -0.082 1.994 -1.977 H101 WD7 32 WD7 H111 H10 H 0 0 N N N 27.539 0.077 -0.851 -0.445 0.016 0.319 H111 WD7 33 WD7 H112 H11 H 0 0 N N N 28.600 -0.947 0.175 -0.864 1.745 0.363 H112 WD7 34 WD7 H162 H12 H 0 0 N N N 28.909 3.373 -4.735 -6.790 1.081 1.893 H162 WD7 35 WD7 H161 H13 H 0 0 N N N 30.475 3.300 -5.612 -5.056 1.475 1.808 H161 WD7 36 WD7 H163 H14 H 0 0 N N N 28.950 2.876 -6.461 -6.156 2.016 0.517 H163 WD7 37 WD7 H121 H15 H 0 0 N N N 30.482 0.733 -0.542 -2.175 0.567 -1.844 H121 WD7 38 WD7 H141 H16 H 0 0 N N N 31.264 1.306 -3.181 -4.431 0.014 -1.612 H141 WD7 39 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WD7 O18 S15 DOUB N N 1 WD7 C16 S15 SING N N 2 WD7 S15 O17 DOUB N N 3 WD7 S15 N14 SING N N 4 WD7 N14 C13 SING N N 5 WD7 O19 C13 DOUB N N 6 WD7 C13 N12 SING N N 7 WD7 N12 C11 SING N N 8 WD7 C11 C10 SING N N 9 WD7 N07 C08 DOUB Y N 10 WD7 N07 C06 SING Y N 11 WD7 C08 N09 SING Y N 12 WD7 C05 N04 SING N N 13 WD7 C06 N04 SING N N 14 WD7 C06 C20 DOUB Y N 15 WD7 N04 C03 SING N N 16 WD7 N09 C20 SING Y N 17 WD7 N09 C10 SING N N 18 WD7 C20 C21 SING N N 19 WD7 C03 O23 DOUB N N 20 WD7 C03 N02 SING N N 21 WD7 C21 N02 SING N N 22 WD7 C21 S22 DOUB N N 23 WD7 N02 C01 SING N N 24 WD7 C01 H013 SING N N 25 WD7 C01 H012 SING N N 26 WD7 C01 H011 SING N N 27 WD7 C05 H052 SING N N 28 WD7 C05 H053 SING N N 29 WD7 C05 H051 SING N N 30 WD7 C08 H081 SING N N 31 WD7 C10 H102 SING N N 32 WD7 C10 H101 SING N N 33 WD7 C11 H111 SING N N 34 WD7 C11 H112 SING N N 35 WD7 C16 H162 SING N N 36 WD7 C16 H161 SING N N 37 WD7 C16 H163 SING N N 38 WD7 N12 H121 SING N N 39 WD7 N14 H141 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WD7 SMILES ACDLabs 12.01 "c12C(N(C)C(=O)N(C)c1ncn2CCNC(NS(C)(=O)=O)=O)=S" WD7 InChI InChI 1.03 "InChI=1S/C11H16N6O4S2/c1-15-8-7(9(22)16(2)11(15)19)17(6-13-8)5-4-12-10(18)14-23(3,20)21/h6H,4-5H2,1-3H3,(H2,12,14,18)" WD7 InChIKey InChI 1.03 CEDCEGLXBVDTJP-UHFFFAOYSA-N WD7 SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(C)c2ncn(CCNC(=O)N[S](C)(=O)=O)c2C1=S" WD7 SMILES CACTVS 3.385 "CN1C(=O)N(C)c2ncn(CCNC(=O)N[S](C)(=O)=O)c2C1=S" WD7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1c2c(n(cn2)CCNC(=O)NS(=O)(=O)C)C(=S)N(C1=O)C" WD7 SMILES "OpenEye OEToolkits" 2.0.7 "CN1c2c(n(cn2)CCNC(=O)NS(=O)(=O)C)C(=S)N(C1=O)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WD7 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{[2-(1,3-dimethyl-2-oxo-6-sulfanylidene-1,2,3,6-tetrahydro-7H-purin-7-yl)ethyl]carbamoyl}methanesulfonamide" WD7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[2-(1,3-dimethyl-2-oxidanylidene-6-sulfanylidene-purin-7-yl)ethyl]-3-methylsulfonyl-urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WD7 "Create component" 2020-10-15 RCSB WD7 "Initial release" 2021-03-10 RCSB ##