data_WDN # _chem_comp.id WDN _chem_comp.name "methyl N-methyl-N-(thiophene-3-carbonyl)glycinate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H11 N O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-02 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 213.254 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WDN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FP4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WDN C7 C1 C 0 1 Y N N -4.243 16.197 -38.554 3.565 -0.874 -0.502 C7 WDN 1 WDN C8 C2 C 0 1 Y N N -2.073 17.034 -39.329 2.328 1.192 0.161 C8 WDN 2 WDN O1 O1 O 0 1 N N N 0.752 11.952 -35.698 -4.156 0.147 0.100 O1 WDN 3 WDN C1 C3 C 0 1 N N N 0.615 14.378 -36.255 -2.032 -0.876 0.835 C1 WDN 4 WDN C5 C4 C 0 1 Y N N -1.950 15.999 -38.471 1.612 0.048 0.326 C5 WDN 5 WDN C6 C5 C 0 1 Y N N -3.214 15.501 -38.009 2.342 -1.138 -0.056 C6 WDN 6 WDN C4 C6 C 0 1 N N N -0.662 15.436 -38.061 0.233 0.021 0.841 C4 WDN 7 WDN C3 C7 C 0 1 N N N 2.120 12.042 -35.965 -4.872 0.980 -0.849 C3 WDN 8 WDN C2 C8 C 0 1 N N N 0.024 13.057 -35.830 -2.841 -0.025 -0.109 C2 WDN 9 WDN O2 O2 O 0 1 N N N 0.214 15.156 -38.863 -0.122 0.835 1.673 O2 WDN 10 WDN S S1 S 0 1 Y N N -3.691 17.421 -39.595 3.877 0.852 -0.465 S WDN 11 WDN N N1 N 0 1 N N N -0.469 15.236 -36.695 -0.636 -0.906 0.392 N WDN 12 WDN C C9 C 0 1 N N N -1.514 15.581 -35.719 -0.185 -1.942 -0.540 C WDN 13 WDN O O3 O 0 1 N N N -1.147 12.907 -35.568 -2.306 0.503 -1.056 O WDN 14 WDN H1 H1 H 0 1 N N N -5.285 15.998 -38.351 4.271 -1.620 -0.836 H1 WDN 15 WDN H2 H2 H 0 1 N N N -1.241 17.548 -39.786 1.962 2.183 0.388 H2 WDN 16 WDN H3 H3 H 0 1 N N N 1.325 14.221 -37.081 -2.086 -0.456 1.839 H3 WDN 17 WDN H4 H4 H 0 1 N N N 1.138 14.843 -35.406 -2.432 -1.890 0.843 H4 WDN 18 WDN H5 H5 H 0 1 N N N -3.331 14.679 -37.318 1.936 -2.136 0.014 H5 WDN 19 WDN H6 H6 H 0 1 N N N 2.589 11.058 -35.815 -5.922 1.036 -0.564 H6 WDN 20 WDN H7 H7 H 0 1 N N N 2.270 12.365 -37.006 -4.442 1.982 -0.850 H7 WDN 21 WDN H8 H8 H 0 1 N N N 2.579 12.774 -35.284 -4.788 0.548 -1.847 H8 WDN 22 WDN H9 H9 H 0 1 N N N -1.161 15.346 -34.704 0.261 -2.764 0.019 H9 WDN 23 WDN H10 H10 H 0 1 N N N -1.740 16.655 -35.789 -1.036 -2.312 -1.112 H10 WDN 24 WDN H11 H11 H 0 1 N N N -2.423 15.000 -35.934 0.555 -1.522 -1.221 H11 WDN 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WDN S C8 SING Y N 1 WDN S C7 SING Y N 2 WDN C8 C5 DOUB Y N 3 WDN O2 C4 DOUB N N 4 WDN C7 C6 DOUB Y N 5 WDN C5 C4 SING N N 6 WDN C5 C6 SING Y N 7 WDN C4 N SING N N 8 WDN N C1 SING N N 9 WDN N C SING N N 10 WDN C1 C2 SING N N 11 WDN C3 O1 SING N N 12 WDN C2 O1 SING N N 13 WDN C2 O DOUB N N 14 WDN C7 H1 SING N N 15 WDN C8 H2 SING N N 16 WDN C1 H3 SING N N 17 WDN C1 H4 SING N N 18 WDN C6 H5 SING N N 19 WDN C3 H6 SING N N 20 WDN C3 H7 SING N N 21 WDN C3 H8 SING N N 22 WDN C H9 SING N N 23 WDN C H10 SING N N 24 WDN C H11 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WDN SMILES ACDLabs 12.01 "CN(CC(=O)OC)C(=O)c1ccsc1" WDN InChI InChI 1.06 "InChI=1S/C9H11NO3S/c1-10(5-8(11)13-2)9(12)7-3-4-14-6-7/h3-4,6H,5H2,1-2H3" WDN InChIKey InChI 1.06 DGJIUWOYENJXFN-UHFFFAOYSA-N WDN SMILES_CANONICAL CACTVS 3.385 "COC(=O)CN(C)C(=O)c1cscc1" WDN SMILES CACTVS 3.385 "COC(=O)CN(C)C(=O)c1cscc1" WDN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CC(=O)OC)C(=O)c1ccsc1" WDN SMILES "OpenEye OEToolkits" 2.0.7 "CN(CC(=O)OC)C(=O)c1ccsc1" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WDN "SYSTEMATIC NAME" ACDLabs 12.01 "methyl N-methyl-N-(thiophene-3-carbonyl)glycinate" WDN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl 2-[methyl(thiophen-3-ylcarbonyl)amino]ethanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WDN "Create component" 2022-09-02 RCSB WDN "Initial release" 2022-11-02 RCSB #