data_WEM # _chem_comp.id WEM _chem_comp.name "methyl 7-(3,5-difluoropyridin-2-yl)-2-methyl-10-[(methylsulfonyl)methyl]-3-oxo-3,4,6,7-tetrahydro-2H-2,4,7-triazadibenzo[cd,f]azulene-9-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H20 F2 N4 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-21 _chem_comp.pdbx_modified_date 2021-02-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 514.501 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WEM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KHL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WEM C4 C1 C 0 1 N N N -8.701 18.582 8.602 1.425 -1.748 -0.113 C4 WEM 1 WEM C5 C2 C 0 1 Y N N -10.121 18.899 8.521 2.676 -1.394 0.559 C5 WEM 2 WEM C6 C3 C 0 1 Y N N -10.828 19.743 7.674 3.003 -0.401 1.468 C6 WEM 3 WEM C11 C4 C 0 1 N N N -10.589 17.395 10.396 3.767 -3.322 -0.467 C11 WEM 4 WEM C7 C5 C 0 1 Y N N -12.139 19.683 8.036 4.302 -0.578 1.818 C7 WEM 5 WEM C10 C6 C 0 1 Y N N -11.036 18.316 9.418 3.827 -2.190 0.371 C10 WEM 6 WEM C13 C7 C 0 1 N N N -10.261 20.558 6.535 2.123 0.720 1.972 C13 WEM 7 WEM N2 N1 N 0 1 N N N -9.260 17.103 10.395 2.574 -3.629 -1.026 N2 WEM 8 WEM C3 C8 C 0 1 N N N -8.353 17.663 9.550 1.446 -2.885 -0.869 C3 WEM 9 WEM C1 C9 C 0 1 N N N -8.743 16.115 11.343 2.493 -4.836 -1.853 C1 WEM 10 WEM N8 N2 N 0 1 Y N N -12.269 18.812 9.106 4.813 -1.648 1.138 N8 WEM 11 WEM O12 O1 O 0 1 N N N -11.385 16.870 11.177 4.757 -4.002 -0.680 O12 WEM 12 WEM N14 N3 N 0 1 N N N -9.270 19.684 5.923 1.204 1.150 0.930 N14 WEM 13 WEM C15 C10 C 0 1 Y N N -7.991 19.710 6.467 0.188 0.379 0.378 C15 WEM 14 WEM C16 C11 C 0 1 Y N N -7.693 19.219 7.722 0.190 -0.946 0.005 C16 WEM 15 WEM C17 C12 C 0 1 Y N N -6.384 19.295 8.230 -0.994 -1.587 -0.401 C17 WEM 16 WEM C18 C13 C 0 1 Y N N -5.372 19.832 7.457 -2.165 -0.882 -0.524 C18 WEM 17 WEM C19 C14 C 0 1 Y N N -5.670 20.393 6.181 -2.167 0.487 -0.235 C19 WEM 18 WEM C20 C15 C 0 1 Y N N -6.974 20.316 5.696 -1.008 1.104 0.217 C20 WEM 19 WEM C21 C16 C 0 1 N N N -4.681 21.034 5.279 -3.402 1.275 -0.408 C21 WEM 20 WEM O22 O2 O 0 1 N N N -5.063 21.870 4.473 -4.443 0.718 -0.693 O22 WEM 21 WEM O23 O3 O 0 1 N N N -3.388 20.666 5.272 -3.375 2.613 -0.249 O23 WEM 22 WEM C24 C17 C 0 1 N N N -2.393 21.675 4.915 -4.628 3.324 -0.435 C24 WEM 23 WEM C25 C18 C 0 1 N N N -3.994 19.885 8.104 -3.430 -1.572 -0.966 C25 WEM 24 WEM S26 S1 S 0 1 N N N -3.847 21.375 9.143 -4.388 -2.068 0.492 S26 WEM 25 WEM O27 O4 O 0 1 N N N -3.879 22.504 8.264 -3.652 -3.053 1.204 O27 WEM 26 WEM O28 O5 O 0 1 N N N -4.780 21.310 10.211 -4.818 -0.896 1.172 O28 WEM 27 WEM C29 C19 C 0 1 N N N -2.187 21.406 9.848 -5.835 -2.861 -0.263 C29 WEM 28 WEM C30 C20 C 0 1 Y N N -9.701 18.619 5.096 1.358 2.445 0.442 C30 WEM 29 WEM C31 C21 C 0 1 Y N N -8.839 17.559 4.744 2.250 2.689 -0.599 C31 WEM 30 WEM C32 C22 C 0 1 Y N N -9.323 16.482 4.010 2.392 3.982 -1.075 C32 WEM 31 WEM C33 C23 C 0 1 Y N N -10.675 16.486 3.675 1.634 4.991 -0.491 C33 WEM 32 WEM C34 C24 C 0 1 Y N N -11.478 17.534 4.064 0.768 4.675 0.540 C34 WEM 33 WEM N35 N4 N 0 1 Y N N -10.998 18.536 4.769 0.650 3.432 0.968 N35 WEM 34 WEM F36 F1 F 0 1 N N N -11.228 15.488 2.957 1.743 6.265 -0.924 F36 WEM 35 WEM F37 F2 F 0 1 N N N -7.519 17.563 5.046 2.967 1.679 -1.138 F37 WEM 36 WEM H1 H1 H 0 1 N N N -12.946 20.226 7.566 4.847 0.032 2.523 H1 WEM 37 WEM H2 H2 H 0 1 N N N -9.789 21.478 6.911 1.553 0.372 2.833 H2 WEM 38 WEM H3 H3 H 0 1 N N N -11.049 20.819 5.813 2.747 1.563 2.268 H3 WEM 39 WEM H4 H4 H 0 1 N N N -7.317 17.369 9.632 0.538 -3.205 -1.357 H4 WEM 40 WEM H5 H5 H 0 1 N N N -9.567 15.738 11.967 3.468 -5.321 -1.885 H5 WEM 41 WEM H6 H6 H 0 1 N N N -8.290 15.279 10.790 1.760 -5.520 -1.425 H6 WEM 42 WEM H7 H7 H 0 1 N N N -7.983 16.585 11.985 2.188 -4.564 -2.864 H7 WEM 43 WEM H9 H8 H 0 1 N N N -13.124 18.585 9.572 5.727 -1.968 1.193 H9 WEM 44 WEM H8 H9 H 0 1 N N N -6.169 18.934 9.225 -0.982 -2.645 -0.617 H8 WEM 45 WEM H10 H10 H 0 1 N N N -7.209 20.723 4.723 -1.023 2.159 0.445 H10 WEM 46 WEM H11 H11 H 0 1 N N N -1.388 21.229 4.953 -4.466 4.391 -0.278 H11 WEM 47 WEM H12 H12 H 0 1 N N N -2.593 22.043 3.898 -4.994 3.157 -1.448 H12 WEM 48 WEM H13 H13 H 0 1 N N N -2.449 22.513 5.625 -5.363 2.959 0.283 H13 WEM 49 WEM H14 H14 H 0 1 N N N -3.850 18.991 8.728 -4.022 -0.890 -1.575 H14 WEM 50 WEM H15 H15 H 0 1 N N N -3.224 19.912 7.319 -3.176 -2.456 -1.552 H15 WEM 51 WEM H16 H16 H 0 1 N N N -2.073 22.299 10.481 -5.510 -3.707 -0.869 H16 WEM 52 WEM H17 H17 H 0 1 N N N -2.030 20.503 10.456 -6.507 -3.212 0.521 H17 WEM 53 WEM H18 H18 H 0 1 N N N -1.445 21.435 9.037 -6.356 -2.141 -0.893 H18 WEM 54 WEM H19 H19 H 0 1 N N N -8.674 15.672 3.711 3.076 4.202 -1.881 H19 WEM 55 WEM H20 H20 H 0 1 N N N -12.521 17.534 3.785 0.177 5.455 0.997 H20 WEM 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WEM F36 C33 SING N N 1 WEM C33 C32 DOUB Y N 2 WEM C33 C34 SING Y N 3 WEM C32 C31 SING Y N 4 WEM C34 N35 DOUB Y N 5 WEM O22 C21 DOUB N N 6 WEM C31 F37 SING N N 7 WEM C31 C30 DOUB Y N 8 WEM N35 C30 SING Y N 9 WEM C24 O23 SING N N 10 WEM C30 N14 SING N N 11 WEM O23 C21 SING N N 12 WEM C21 C19 SING N N 13 WEM C20 C19 DOUB Y N 14 WEM C20 C15 SING Y N 15 WEM N14 C15 SING N N 16 WEM N14 C13 SING N N 17 WEM C19 C18 SING Y N 18 WEM C15 C16 DOUB Y N 19 WEM C13 C6 SING N N 20 WEM C18 C25 SING N N 21 WEM C18 C17 DOUB Y N 22 WEM C6 C7 DOUB Y N 23 WEM C6 C5 SING Y N 24 WEM C16 C17 SING Y N 25 WEM C16 C4 SING N N 26 WEM C7 N8 SING Y N 27 WEM C25 S26 SING N N 28 WEM O27 S26 DOUB N N 29 WEM C5 C4 SING N N 30 WEM C5 C10 DOUB Y N 31 WEM C4 C3 DOUB N N 32 WEM N8 C10 SING Y N 33 WEM S26 C29 SING N N 34 WEM S26 O28 DOUB N N 35 WEM C10 C11 SING N N 36 WEM C3 N2 SING N N 37 WEM N2 C11 SING N N 38 WEM N2 C1 SING N N 39 WEM C11 O12 DOUB N N 40 WEM C7 H1 SING N N 41 WEM C13 H2 SING N N 42 WEM C13 H3 SING N N 43 WEM C3 H4 SING N N 44 WEM C1 H5 SING N N 45 WEM C1 H6 SING N N 46 WEM C1 H7 SING N N 47 WEM N8 H9 SING N N 48 WEM C17 H8 SING N N 49 WEM C20 H10 SING N N 50 WEM C24 H11 SING N N 51 WEM C24 H12 SING N N 52 WEM C24 H13 SING N N 53 WEM C25 H14 SING N N 54 WEM C25 H15 SING N N 55 WEM C29 H16 SING N N 56 WEM C29 H17 SING N N 57 WEM C29 H18 SING N N 58 WEM C32 H19 SING N N 59 WEM C34 H20 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WEM SMILES ACDLabs 12.01 "C13=CN(C(=O)c2c1c(cn2)CN(c4c3cc(CS(C)(=O)=O)c(c4)C(=O)OC)c5c(F)cc(cn5)F)C" WEM InChI InChI 1.03 "InChI=1S/C24H20F2N4O5S/c1-29-10-17-16-4-12(11-36(3,33)34)15(24(32)35-2)6-19(16)30(22-18(26)5-14(25)8-28-22)9-13-7-27-21(20(13)17)23(29)31/h4-8,10,27H,9,11H2,1-3H3" WEM InChIKey InChI 1.03 JWMPEBHROPXGMV-UHFFFAOYSA-N WEM SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1cc2N(Cc3c[nH]c4C(=O)N(C)C=C(c2cc1C[S](C)(=O)=O)c34)c5ncc(F)cc5F" WEM SMILES CACTVS 3.385 "COC(=O)c1cc2N(Cc3c[nH]c4C(=O)N(C)C=C(c2cc1C[S](C)(=O)=O)c34)c5ncc(F)cc5F" WEM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C=C2c3cc(c(cc3N(Cc4c2c([nH]c4)C1=O)c5c(cc(cn5)F)F)C(=O)OC)CS(=O)(=O)C" WEM SMILES "OpenEye OEToolkits" 2.0.7 "CN1C=C2c3cc(c(cc3N(Cc4c2c([nH]c4)C1=O)c5c(cc(cn5)F)F)C(=O)OC)CS(=O)(=O)C" # _pdbx_chem_comp_identifier.comp_id WEM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "methyl 7-(3,5-difluoropyridin-2-yl)-2-methyl-10-[(methylsulfonyl)methyl]-3-oxo-3,4,6,7-tetrahydro-2H-2,4,7-triazadibenzo[cd,f]azulene-9-carboxylate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WEM "Create component" 2020-10-21 RCSB WEM "Initial release" 2021-02-24 RCSB ##