data_WF7 # _chem_comp.id WF7 _chem_comp.name "N-{4-[(E)-2-{4-(4-methylpiperazin-1-yl)-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}ethenyl]phenyl}prop-2-enamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H28 N8 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-26 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 444.532 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WF7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KIE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WF7 N4 N1 N 0 1 Y N N N N N 52.373 23.686 3.132 -1.156 5.896 0.307 N4 WF7 1 WF7 C24 C1 C 0 1 Y N N N N N 46.908 21.802 9.297 3.547 1.252 0.079 C24 WF7 2 WF7 C23 C2 C 0 1 Y N N N N N 45.517 21.952 9.426 4.882 0.925 0.001 C23 WF7 3 WF7 N3 N2 N 0 1 N N N N N N 53.517 22.702 6.190 -3.183 3.007 -0.176 N3 WF7 4 WF7 C22 C3 C 0 1 N N N N N N 40.662 23.119 13.025 8.917 -3.397 0.549 C22 WF7 5 WF7 C20 C4 C 0 1 N N N N N N 42.909 22.627 11.887 7.052 -1.908 0.106 C20 WF7 6 WF7 C18 C5 C 0 1 Y N N N N N 45.764 21.966 11.816 4.303 -1.372 -0.447 C18 WF7 7 WF7 C19 C6 C 0 1 Y N N N N N 44.917 22.024 10.693 5.266 -0.386 -0.262 C19 WF7 8 WF7 C17 C7 C 0 1 Y N N N N N 47.158 21.818 11.687 2.965 -1.054 -0.369 C17 WF7 9 WF7 C15 C8 C 0 1 N N N N N N 49.166 21.583 10.336 1.146 0.607 -0.023 C15 WF7 10 WF7 C16 C9 C 0 1 Y N N N N N 47.757 21.732 10.423 2.575 0.262 -0.106 C16 WF7 11 WF7 N2 N3 N 0 1 N N N N N N 54.265 21.029 10.490 -4.367 -1.664 -0.403 N2 WF7 12 WF7 C21 C10 C 0 1 N N N N N N 41.408 22.924 11.687 8.490 -2.216 0.109 C21 WF7 13 WF7 C14 C11 C 0 1 N N N N N N 49.846 22.036 9.021 0.214 -0.345 -0.201 C14 WF7 14 WF7 C1 C12 C 0 1 N N N N N N 57.007 21.321 13.613 -6.753 -5.044 0.451 C1 WF7 15 WF7 C13 C13 C 0 1 Y N N N N N 51.232 21.952 8.841 -1.212 0.018 -0.235 C13 WF7 16 WF7 C4 C14 C 0 1 N N N N N N 53.751 20.702 11.835 -3.725 -2.985 -0.432 C4 WF7 17 WF7 C5 C15 C 0 1 N N N N N N 54.723 21.248 12.841 -4.796 -4.067 -0.589 C5 WF7 18 WF7 O1 O1 O 0 1 N N N N N N 43.404 22.766 13.009 6.253 -2.732 0.507 O1 WF7 19 WF7 N1 N4 N 0 1 N N N N N N 56.108 20.809 12.550 -5.751 -3.973 0.525 N1 WF7 20 WF7 C6 C16 C 0 1 Y N N N N N 53.420 21.486 9.561 -3.421 -0.653 -0.334 C6 WF7 21 WF7 C3 C17 C 0 1 N N N N N N 55.695 20.745 10.131 -5.322 -1.569 0.710 C3 WF7 22 WF7 C2 C18 C 0 1 N N N N N N 56.582 21.273 11.222 -6.393 -2.651 0.553 C2 WF7 23 WF7 C7 C19 C 0 1 Y N N N N N 53.912 21.882 8.314 -3.817 0.682 -0.296 C7 WF7 24 WF7 C12 C20 C 0 1 N N N N N N 49.849 23.790 3.066 1.288 5.179 0.321 C12 WF7 25 WF7 C11 C21 C 0 1 Y N N N N N 51.214 23.523 3.765 -0.198 4.949 0.222 C11 WF7 26 WF7 C10 C22 C 0 1 Y N N N N N 51.419 23.123 5.029 -0.808 3.757 0.033 C10 WF7 27 WF7 C9 C23 C 0 1 Y N N N N N 52.746 23.054 5.146 -2.194 3.983 0.001 C9 WF7 28 WF7 C8 C24 C 0 1 Y N N N N N 53.015 22.322 7.354 -2.833 1.665 -0.221 C8 WF7 29 WF7 N8 N5 N 0 1 Y N N N N N 52.089 21.528 9.801 -2.125 -0.945 -0.302 N8 WF7 30 WF7 N5 N6 N 0 1 Y N N N N N 53.320 23.396 3.998 -2.400 5.268 0.166 N5 WF7 31 WF7 N6 N7 N 0 1 Y N N N N N 51.699 22.347 7.640 -1.555 1.301 -0.192 N6 WF7 32 WF7 N7 N8 N 0 1 N N N N N N 43.570 22.209 10.758 6.620 -0.712 -0.340 N7 WF7 33 WF7 H1 H1 H 0 1 N N N N N N 52.500 23.973 2.183 -1.008 6.844 0.446 H1 WF7 34 WF7 H2 H2 H 0 1 N N N N N N 47.340 21.738 8.309 3.250 2.269 0.288 H2 WF7 35 WF7 H3 H3 H 0 1 N N N N N N 44.902 22.013 8.540 5.633 1.689 0.144 H3 WF7 36 WF7 H4 H4 H 0 1 N N N N N N 54.511 22.728 6.082 -4.112 3.269 -0.267 H4 WF7 37 WF7 H5 H5 H 0 1 N N N N N N 41.199 23.041 13.959 8.207 -4.129 0.905 H5 WF7 38 WF7 H6 H6 H 0 1 N N N N N N 39.603 23.333 13.027 9.973 -3.623 0.551 H6 WF7 39 WF7 H8 H8 H 0 1 N N N N N N 45.333 22.037 12.804 4.604 -2.389 -0.651 H8 WF7 40 WF7 H9 H9 H 0 1 N N N N N N 47.773 21.770 12.573 2.218 -1.821 -0.514 H9 WF7 41 WF7 H10 H10 H 0 1 N N N N N N 49.740 21.171 11.153 0.847 1.624 0.182 H10 WF7 42 WF7 H11 H11 H 0 1 N N N N N N 40.932 22.988 10.719 9.200 -1.484 -0.248 H11 WF7 43 WF7 H13 H13 H 0 1 N N N N N N 49.235 22.427 8.221 0.512 -1.377 -0.319 H13 WF7 44 WF7 H14 H14 H 0 1 N N N N N N 56.651 20.974 14.594 -6.255 -6.012 0.499 H14 WF7 45 WF7 H15 H15 H 0 1 N N N N N N 58.028 20.948 13.441 -7.447 -4.950 1.287 H15 WF7 46 WF7 H16 H16 H 0 1 N N N N N N 57.010 22.421 13.592 -7.302 -4.964 -0.487 H16 WF7 47 WF7 H17 H17 H 0 1 N N N N N N 52.763 21.163 11.981 -3.032 -3.035 -1.272 H17 WF7 48 WF7 H18 H18 H 0 1 N N N N N N 53.667 19.611 11.949 -3.180 -3.145 0.499 H18 WF7 49 WF7 H19 H19 H 0 1 N N N N N N 54.684 22.347 12.816 -5.323 -3.924 -1.532 H19 WF7 50 WF7 H20 H20 H 0 1 N N N N N N 54.438 20.893 13.843 -4.325 -5.050 -0.581 H20 WF7 51 WF7 H22 H22 H 0 1 N N N N N N 55.842 19.660 10.028 -4.795 -1.713 1.653 H22 WF7 52 WF7 H23 H23 H 0 1 N N N N N N 55.943 21.240 9.181 -5.794 -0.587 0.702 H23 WF7 53 WF7 H24 H24 H 0 1 N N N N N N 57.609 20.914 11.059 -6.938 -2.492 -0.377 H24 WF7 54 WF7 H25 H25 H 0 1 N N N N N N 56.570 22.373 11.198 -7.086 -2.602 1.393 H25 WF7 55 WF7 H26 H26 H 0 1 N N N N N N 54.971 21.846 8.103 -4.864 0.948 -0.321 H26 WF7 56 WF7 H27 H27 H 0 1 N N N N N N 49.493 22.864 2.590 1.600 5.096 1.362 H27 WF7 57 WF7 H28 H28 H 0 1 N N N N N N 49.114 24.124 3.813 1.812 4.431 -0.275 H28 WF7 58 WF7 H29 H29 H 0 1 N N N N N N 49.975 24.570 2.301 1.527 6.174 -0.052 H29 WF7 59 WF7 H30 H30 H 0 1 N N N N N N 50.676 22.906 5.783 -0.317 2.801 -0.075 H30 WF7 60 WF7 H31 H31 H 0 1 N N N N N N 43.030 22.030 9.936 7.251 -0.078 -0.716 H31 WF7 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WF7 C12 C11 SING N N 1 WF7 N4 C11 SING Y N 2 WF7 N4 N5 SING Y N 3 WF7 C11 C10 DOUB Y N 4 WF7 N5 C9 DOUB Y N 5 WF7 C10 C9 SING Y N 6 WF7 C9 N3 SING N N 7 WF7 N3 C8 SING N N 8 WF7 C8 N6 DOUB Y N 9 WF7 C8 C7 SING Y N 10 WF7 N6 C13 SING Y N 11 WF7 C7 C6 DOUB Y N 12 WF7 C13 C14 SING N N 13 WF7 C13 N8 DOUB Y N 14 WF7 C14 C15 DOUB N E 15 WF7 C24 C23 DOUB Y N 16 WF7 C24 C16 SING Y N 17 WF7 C23 C19 SING Y N 18 WF7 C6 N8 SING Y N 19 WF7 C6 N2 SING N N 20 WF7 C3 N2 SING N N 21 WF7 C3 C2 SING N N 22 WF7 C15 C16 SING N N 23 WF7 C16 C17 DOUB Y N 24 WF7 N2 C4 SING N N 25 WF7 C19 N7 SING N N 26 WF7 C19 C18 DOUB Y N 27 WF7 N7 C20 SING N N 28 WF7 C2 N1 SING N N 29 WF7 C21 C20 SING N N 30 WF7 C21 C22 DOUB N N 31 WF7 C17 C18 SING Y N 32 WF7 C4 C5 SING N N 33 WF7 C20 O1 DOUB N N 34 WF7 N1 C5 SING N N 35 WF7 N1 C1 SING N N 36 WF7 N4 H1 SING N N 37 WF7 C24 H2 SING N N 38 WF7 C23 H3 SING N N 39 WF7 N3 H4 SING N N 40 WF7 C22 H5 SING N N 41 WF7 C22 H6 SING N N 42 WF7 C18 H8 SING N N 43 WF7 C17 H9 SING N N 44 WF7 C15 H10 SING N N 45 WF7 C21 H11 SING N N 46 WF7 C14 H13 SING N N 47 WF7 C1 H14 SING N N 48 WF7 C1 H15 SING N N 49 WF7 C1 H16 SING N N 50 WF7 C4 H17 SING N N 51 WF7 C4 H18 SING N N 52 WF7 C5 H19 SING N N 53 WF7 C5 H20 SING N N 54 WF7 C3 H22 SING N N 55 WF7 C3 H23 SING N N 56 WF7 C2 H24 SING N N 57 WF7 C2 H25 SING N N 58 WF7 C7 H26 SING N N 59 WF7 C12 H27 SING N N 60 WF7 C12 H28 SING N N 61 WF7 C12 H29 SING N N 62 WF7 C10 H30 SING N N 63 WF7 N7 H31 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WF7 SMILES ACDLabs 12.01 "n4c(C)cc(Nc3cc(N1CCN(C)CC1)nc([C@H]=[C@H]c2ccc(cc2)NC(=O)/C=C)n3)n4" WF7 InChI InChI 1.03 "InChI=1S/C24H28N8O/c1-4-24(33)25-19-8-5-18(6-9-19)7-10-20-26-21(27-22-15-17(2)29-30-22)16-23(28-20)32-13-11-31(3)12-14-32/h4-10,15-16H,1,11-14H2,2-3H3,(H,25,33)(H2,26,27,28,29,30)/b10-7+" WF7 InChIKey InChI 1.03 YSDWTPVGKQWXNG-JXMROGBWSA-N WF7 SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2cc(Nc3cc(C)[nH]n3)nc(\C=C\c4ccc(NC(=O)C=C)cc4)n2" WF7 SMILES CACTVS 3.385 "CN1CCN(CC1)c2cc(Nc3cc(C)[nH]n3)nc(C=Cc4ccc(NC(=O)C=C)cc4)n2" WF7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(n[nH]1)Nc2cc(nc(n2)/C=C/c3ccc(cc3)NC(=O)C=C)N4CCN(CC4)C" WF7 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(n[nH]1)Nc2cc(nc(n2)C=Cc3ccc(cc3)NC(=O)C=C)N4CCN(CC4)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WF7 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{4-[(E)-2-{4-(4-methylpiperazin-1-yl)-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}ethenyl]phenyl}prop-2-enamide" WF7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[4-[(~{E})-2-[4-(4-methylpiperazin-1-yl)-6-[(5-methyl-1~{H}-pyrazol-3-yl)amino]pyrimidin-2-yl]ethenyl]phenyl]prop-2-enamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WF7 "Create component" 2020-10-26 RCSB WF7 "Initial release" 2021-02-10 RCSB WF7 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id WF7 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C22 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #