data_WKE # _chem_comp.id WKE _chem_comp.name "(2~{R})-~{N}-[(2~{R},3~{S},4~{S},5~{R},6~{R})-5-acetamido-2-methyl-4,6-bis(oxidanyl)oxan-3-yl]-2,3-bis(oxidanyl)propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H20 N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-17 _chem_comp.pdbx_modified_date 2024-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 292.286 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WKE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P3B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WKE C1 C1 C 0 1 N N R N N N 196.432 166.000 171.938 0.010 -1.695 0.607 C1 WKE 1 WKE C2 C2 C 0 1 N N R N N N 198.185 167.549 171.971 2.357 -1.200 0.597 C2 WKE 2 WKE C3 C3 C 0 1 N N R N N N 199.278 166.489 171.961 2.117 0.161 -0.061 C3 WKE 3 WKE C4 C4 C 0 1 N N N N N N 201.693 166.845 171.811 4.333 1.155 -0.255 C4 WKE 4 WKE C5 C5 C 0 1 N N N N N N 201.806 166.082 173.099 5.391 2.128 0.199 C5 WKE 5 WKE C6 C6 C 0 1 N N S N N N 198.754 165.268 171.216 0.734 0.680 0.347 C6 WKE 6 WKE C7 C7 C 0 1 N N S N N N 197.383 164.827 171.719 -0.324 -0.353 -0.051 C7 WKE 7 WKE C8 C8 C 0 1 N N N N N N 196.496 162.664 171.048 -2.754 -0.333 -0.229 C8 WKE 8 WKE C9 C9 C 0 1 N N R N N N 195.841 161.866 169.962 -4.111 0.131 0.236 C9 WKE 9 WKE C10 C10 C 0 1 N N N N N N 194.507 162.505 169.598 -4.238 1.639 0.012 C10 WKE 10 WKE N1 N1 N 0 1 N N N N N N 196.800 163.923 170.750 -1.643 0.098 0.400 N1 WKE 11 WKE O1 O1 O 0 1 N N N N N N 202.673 167.316 171.258 4.550 0.416 -1.191 O1 WKE 12 WKE O6 O2 O 0 1 N N N N N N 199.682 164.188 171.368 0.471 1.916 -0.321 O6 WKE 13 WKE O3 O3 O 0 1 N N N N N N 196.727 162.163 172.136 -2.663 -1.095 -1.168 O3 WKE 14 WKE O4 O4 O 0 1 N N N N N N 196.688 161.848 168.808 -5.126 -0.549 -0.506 O4 WKE 15 WKE O5 O5 O 0 1 N N N N N N 193.881 161.744 168.559 -5.476 2.099 0.557 O5 WKE 16 WKE N N2 N 0 1 N N N N N N 200.471 166.980 171.299 3.145 1.107 0.380 N WKE 17 WKE C C11 C 0 1 N N N N N N 195.177 165.545 172.674 -1.009 -2.747 0.166 C WKE 18 WKE O O6 O 0 1 N N N N N N 197.071 167.029 172.691 1.321 -2.104 0.210 O WKE 19 WKE H1 H1 H 0 1 N N N N N N 196.134 166.392 170.954 -0.024 -1.587 1.691 H1 WKE 20 WKE H2 H2 H 0 1 N N N N N N 197.879 167.710 170.927 2.353 -1.085 1.681 H2 WKE 21 WKE H4 H4 H 0 1 N N N N N N 199.512 166.204 172.997 2.161 0.055 -1.145 H4 WKE 22 WKE H5 H5 H 0 1 N N N N N N 202.860 166.041 173.410 6.275 2.022 -0.429 H5 WKE 23 WKE H6 H6 H 0 1 N N N N N N 201.214 166.586 173.877 5.008 3.145 0.118 H6 WKE 24 WKE H7 H7 H 0 1 N N N N N N 201.426 165.060 172.954 5.655 1.920 1.236 H7 WKE 25 WKE H8 H8 H 0 1 N N N N N N 198.663 165.527 170.151 0.705 0.835 1.425 H8 WKE 26 WKE H9 H9 H 0 1 N N N N N N 197.516 164.303 172.677 -0.330 -0.470 -1.135 H9 WKE 27 WKE H10 H10 H 0 1 N N N N N N 195.662 160.841 170.320 -4.227 -0.090 1.297 H10 WKE 28 WKE H11 H11 H 0 1 N N N N N N 194.677 163.534 169.248 -3.412 2.151 0.504 H11 WKE 29 WKE H12 H12 H 0 1 N N N N N N 193.855 162.522 170.484 -4.211 1.851 -1.057 H12 WKE 30 WKE H13 H13 H 0 1 N N N N N N 196.620 164.257 169.825 -1.716 0.707 1.151 H13 WKE 31 WKE H14 H14 H 0 1 N N N N N N 200.537 164.459 171.056 1.104 2.617 -0.115 H14 WKE 32 WKE H15 H15 H 0 1 N N N N N N 197.521 161.450 169.032 -5.084 -0.397 -1.460 H15 WKE 33 WKE H16 H16 H 0 1 N N N N N N 193.049 162.142 168.332 -5.624 3.048 0.451 H16 WKE 34 WKE H17 H17 H 0 1 N N N N N N 200.372 167.441 170.417 2.971 1.698 1.129 H17 WKE 35 WKE H18 H18 H 0 1 N N N N N N 194.506 166.404 172.821 -0.770 -3.703 0.633 H18 WKE 36 WKE H19 H19 H 0 1 N N N N N N 194.662 164.776 172.080 -2.008 -2.435 0.468 H19 WKE 37 WKE H20 H20 H 0 1 N N N N N N 195.457 165.126 173.652 -0.974 -2.855 -0.918 H20 WKE 38 WKE O2 O7 O 0 1 N Y N N N N 198.610 168.802 172.514 3.622 -1.716 0.177 O2 WKE 39 WKE H3 H3 H 0 1 N N N N N N 197.887 169.418 172.493 3.840 -2.579 0.556 H3 WKE 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WKE O5 C10 SING N N 1 WKE O4 C9 SING N N 2 WKE C10 C9 SING N N 3 WKE C9 C8 SING N N 4 WKE N1 C8 SING N N 5 WKE N1 C7 SING N N 6 WKE C8 O3 DOUB N N 7 WKE C6 O6 SING N N 8 WKE C6 C7 SING N N 9 WKE C6 C3 SING N N 10 WKE O1 C4 DOUB N N 11 WKE N C4 SING N N 12 WKE N C3 SING N N 13 WKE C7 C1 SING N N 14 WKE C4 C5 SING N N 15 WKE C1 C SING N N 16 WKE C1 O SING N N 17 WKE C3 C2 SING N N 18 WKE C2 O SING N N 19 WKE C1 H1 SING N N 20 WKE C2 H2 SING N N 21 WKE C3 H4 SING N N 22 WKE C5 H5 SING N N 23 WKE C5 H6 SING N N 24 WKE C5 H7 SING N N 25 WKE C6 H8 SING N N 26 WKE C7 H9 SING N N 27 WKE C9 H10 SING N N 28 WKE C10 H11 SING N N 29 WKE C10 H12 SING N N 30 WKE N1 H13 SING N N 31 WKE O6 H14 SING N N 32 WKE O4 H15 SING N N 33 WKE O5 H16 SING N N 34 WKE N H17 SING N N 35 WKE C H18 SING N N 36 WKE C H19 SING N N 37 WKE C H20 SING N N 38 WKE C2 O2 SING N N 39 WKE O2 H3 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WKE InChI InChI 1.06 "InChI=1S/C11H20N2O7/c1-4-7(13-10(18)6(16)3-14)9(17)8(11(19)20-4)12-5(2)15/h4,6-9,11,14,16-17,19H,3H2,1-2H3,(H,12,15)(H,13,18)/t4-,6-,7-,8-,9+,11-/m1/s1" WKE InChIKey InChI 1.06 ZAABMPWLDGVWSW-VQYCFQGSSA-N WKE SMILES_CANONICAL CACTVS 3.385 "C[C@H]1O[C@@H](O)[C@H](NC(C)=O)[C@@H](O)[C@@H]1NC(=O)[C@H](O)CO" WKE SMILES CACTVS 3.385 "C[CH]1O[CH](O)[CH](NC(C)=O)[CH](O)[CH]1NC(=O)[CH](O)CO" WKE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)NC(=O)C)O)NC(=O)[C@@H](CO)O" WKE SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)O)NC(=O)C)O)NC(=O)C(CO)O" # _pdbx_chem_comp_identifier.comp_id WKE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-~{N}-[(2~{R},3~{S},4~{S},5~{R},6~{R})-5-acetamido-2-methyl-4,6-bis(oxidanyl)oxan-3-yl]-2,3-bis(oxidanyl)propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WKE "Create component" 2023-05-17 PDBE WKE "Modify coordinates" 2023-06-21 PDBE WKE "Initial release" 2024-04-03 RCSB #