data_WKK # _chem_comp.id WKK _chem_comp.name "1-benzothiophen-3-ylboronic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H7 B O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-06 _chem_comp.pdbx_modified_date 2024-10-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 178.016 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WKK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UGM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WKK O1 O1 O 0 1 N N N N N N -19.176 -16.257 11.632 -2.326 -1.902 0.002 O1 WKK 1 WKK B1 B1 B 0 1 N N N N N N -18.046 -15.830 11.035 -2.333 -0.482 -0.001 B1 WKK 2 WKK C1 C1 C 0 1 Y N N N N N -16.653 -16.422 11.457 -0.976 0.309 -0.002 C1 WKK 3 WKK C2 C2 C 0 1 Y N N N N N -15.483 -15.849 11.075 -0.912 1.646 0.002 C2 WKK 4 WKK C3 C3 C 0 1 Y N N N N N -15.162 -17.907 12.485 1.362 0.589 -0.002 C3 WKK 5 WKK C4 C4 C 0 1 Y N N N N N -14.769 -18.978 13.231 2.692 0.155 -0.001 C4 WKK 6 WKK C5 C5 C 0 1 Y N N N N N -15.757 -19.793 13.774 2.983 -1.189 0.000 C5 WKK 7 WKK C6 C6 C 0 1 Y N N N N N -17.115 -19.512 13.558 1.959 -2.125 0.001 C6 WKK 8 WKK C7 C7 C 0 1 Y N N N N N -17.514 -18.412 12.813 0.648 -1.719 0.000 C7 WKK 9 WKK C8 C8 C 0 1 Y N N N N N -16.547 -17.608 12.264 0.330 -0.348 -0.001 C8 WKK 10 WKK O2 O2 O 0 1 N Y N N N N -18.107 -14.981 9.989 -3.566 0.223 -0.001 O2 WKK 11 WKK S1 S1 S 0 1 Y N N N N N -14.086 -16.700 11.690 0.691 2.213 0.001 S1 WKK 12 WKK H1 H1 H 0 1 N N N N N N -18.955 -16.845 12.345 -3.208 -2.299 0.002 H1 WKK 13 WKK H3 H2 H 0 1 N N N N N N -15.422 -14.964 10.459 -1.779 2.291 0.006 H3 WKK 14 WKK H4 H3 H 0 1 N N N N N N -13.722 -19.187 13.396 3.493 0.879 -0.002 H4 WKK 15 WKK H5 H4 H 0 1 N N N N N N -15.476 -20.650 14.368 4.012 -1.516 0.001 H5 WKK 16 WKK H6 H5 H 0 1 N N N N N N -17.864 -20.165 13.980 2.195 -3.179 0.001 H6 WKK 17 WKK H7 H6 H 0 1 N N N N N N -18.562 -18.193 12.668 -0.143 -2.454 -0.000 H7 WKK 18 WKK H2 H7 H 0 1 N N N N N N -19.007 -14.709 9.854 -4.345 -0.349 -0.000 H2 WKK 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WKK O2 B1 SING N N 1 WKK B1 C1 SING N N 2 WKK B1 O1 SING N N 3 WKK C2 C1 DOUB Y N 4 WKK C2 S1 SING Y N 5 WKK C1 C8 SING Y N 6 WKK S1 C3 SING Y N 7 WKK C8 C3 DOUB Y N 8 WKK C8 C7 SING Y N 9 WKK C3 C4 SING Y N 10 WKK C7 C6 DOUB Y N 11 WKK C4 C5 DOUB Y N 12 WKK C6 C5 SING Y N 13 WKK O1 H1 SING N N 14 WKK C2 H3 SING N N 15 WKK C4 H4 SING N N 16 WKK C5 H5 SING N N 17 WKK C6 H6 SING N N 18 WKK C7 H7 SING N N 19 WKK O2 H2 SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WKK SMILES ACDLabs 12.01 "OB(O)c1csc2ccccc21" WKK InChI InChI 1.06 "InChI=1S/C8H7BO2S/c10-9(11)7-5-12-8-4-2-1-3-6(7)8/h1-5,10-11H" WKK InChIKey InChI 1.06 QVANIYYVZZLQJP-UHFFFAOYSA-N WKK SMILES_CANONICAL CACTVS 3.385 "OB(O)c1csc2ccccc12" WKK SMILES CACTVS 3.385 "OB(O)c1csc2ccccc12" WKK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(c1csc2c1cccc2)(O)O" WKK SMILES "OpenEye OEToolkits" 2.0.7 "B(c1csc2c1cccc2)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WKK "SYSTEMATIC NAME" ACDLabs 12.01 "1-benzothiophen-3-ylboronic acid" WKK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-benzothiophen-3-ylboronic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WKK "Create component" 2023-10-06 RCSB WKK "Modify PCM" 2024-09-27 PDBE WKK "Initial release" 2024-10-16 RCSB # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 WKK SER None "Covalent chemical modification" "Amino-acid side chain" "Any position" B1 OG ? ? 2 WKK HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" B1 NE2 ? ? #