data_WNJ # _chem_comp.id WNJ _chem_comp.name "N-{[(3R)-pyrrolidin-3-yl]methyl}pyridin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H15 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-30 _chem_comp.pdbx_modified_date 2020-11-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 177.246 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WNJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RX3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WNJ C10 C1 C 0 1 N N N -33.446 -8.570 -19.565 -3.143 1.161 -0.432 C10 WNJ 1 WNJ N12 N1 N 0 1 N N N -33.795 -6.319 -19.794 -3.998 -0.922 0.475 N12 WNJ 2 WNJ C13 C2 C 0 1 N N N -32.463 -6.665 -20.495 -2.515 -0.964 0.544 C13 WNJ 3 WNJ C01 C3 C 0 1 N N N -31.261 -8.706 -20.898 -0.683 0.592 -0.258 C01 WNJ 4 WNJ C03 C4 C 0 1 Y N N -28.763 -7.964 -20.963 1.647 -0.229 -0.154 C03 WNJ 5 WNJ C04 C5 C 0 1 Y N N -28.460 -8.584 -19.724 2.056 1.058 0.181 C04 WNJ 6 WNJ C05 C6 C 0 1 Y N N -27.162 -8.558 -19.274 3.400 1.301 0.400 C05 WNJ 7 WNJ C06 C7 C 0 1 Y N N -26.195 -7.930 -20.035 4.293 0.246 0.276 C06 WNJ 8 WNJ C07 C8 C 0 1 Y N N -26.565 -7.336 -21.267 3.819 -1.006 -0.059 C07 WNJ 9 WNJ C09 C9 C 0 1 N N R -32.086 -7.845 -19.942 -2.081 0.043 -0.550 C09 WNJ 10 WNJ C11 C10 C 0 1 N N N -34.222 -7.598 -19.048 -4.352 0.496 0.252 C11 WNJ 11 WNJ N02 N2 N 0 1 N N N -30.169 -7.960 -21.479 0.300 -0.488 -0.376 N02 WNJ 12 WNJ N08 N3 N 0 1 Y N N -27.833 -7.369 -21.664 2.532 -1.208 -0.268 N08 WNJ 13 WNJ H1 H1 H 0 1 N N N -33.914 -9.005 -20.460 -2.764 1.979 0.180 H1 WNJ 14 WNJ H2 H2 H 0 1 N N N -33.270 -9.362 -18.822 -3.421 1.527 -1.421 H2 WNJ 15 WNJ H3 H3 H 0 1 N N N -33.663 -5.567 -19.148 -4.342 -1.503 -0.275 H3 WNJ 16 WNJ H5 H5 H 0 1 N N N -31.709 -5.887 -20.304 -2.166 -0.640 1.525 H5 WNJ 17 WNJ H6 H6 H 0 1 N N N -32.611 -6.773 -21.580 -2.147 -1.964 0.314 H6 WNJ 18 WNJ H7 H7 H 0 1 N N N -31.914 -9.069 -21.705 -0.445 1.380 -0.972 H7 WNJ 19 WNJ H8 H8 H 0 1 N N N -30.852 -9.563 -20.343 -0.656 0.998 0.753 H8 WNJ 20 WNJ H9 H9 H 0 1 N N N -29.234 -9.067 -19.146 1.334 1.856 0.269 H9 WNJ 21 WNJ H10 H10 H 0 1 N N N -26.900 -9.024 -18.335 3.747 2.291 0.660 H10 WNJ 22 WNJ H11 H11 H 0 1 N N N -25.171 -7.892 -19.695 5.349 0.403 0.440 H11 WNJ 23 WNJ H12 H12 H 0 1 N N N -25.818 -6.857 -21.883 4.510 -1.830 -0.157 H12 WNJ 24 WNJ H13 H13 H 0 1 N N N -31.512 -7.690 -19.017 -2.116 -0.419 -1.537 H13 WNJ 25 WNJ H14 H14 H 0 1 N N N -34.045 -7.494 -17.967 -4.553 0.984 1.206 H14 WNJ 26 WNJ H15 H15 H 0 1 N N N -35.286 -7.815 -19.227 -5.227 0.563 -0.394 H15 WNJ 27 WNJ H16 H16 H 0 1 N N N -30.458 -7.003 -21.460 0.010 -1.384 -0.610 H16 WNJ 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WNJ N08 C07 DOUB Y N 1 WNJ N08 C03 SING Y N 2 WNJ N02 C03 SING N N 3 WNJ N02 C01 SING N N 4 WNJ C07 C06 SING Y N 5 WNJ C03 C04 DOUB Y N 6 WNJ C01 C09 SING N N 7 WNJ C13 C09 SING N N 8 WNJ C13 N12 SING N N 9 WNJ C06 C05 DOUB Y N 10 WNJ C09 C10 SING N N 11 WNJ N12 C11 SING N N 12 WNJ C04 C05 SING Y N 13 WNJ C10 C11 SING N N 14 WNJ C10 H1 SING N N 15 WNJ C10 H2 SING N N 16 WNJ N12 H3 SING N N 17 WNJ C13 H5 SING N N 18 WNJ C13 H6 SING N N 19 WNJ C01 H7 SING N N 20 WNJ C01 H8 SING N N 21 WNJ C04 H9 SING N N 22 WNJ C05 H10 SING N N 23 WNJ C06 H11 SING N N 24 WNJ C07 H12 SING N N 25 WNJ C09 H13 SING N N 26 WNJ C11 H14 SING N N 27 WNJ C11 H15 SING N N 28 WNJ N02 H16 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WNJ SMILES ACDLabs 12.01 C1CNCC1CNc2ccccn2 WNJ InChI InChI 1.03 "InChI=1S/C10H15N3/c1-2-5-12-10(3-1)13-8-9-4-6-11-7-9/h1-3,5,9,11H,4,6-8H2,(H,12,13)/t9-/m1/s1" WNJ InChIKey InChI 1.03 SHHXEJVQQWFIPM-SECBINFHSA-N WNJ SMILES_CANONICAL CACTVS 3.385 "C1C[C@H](CN1)CNc2ccccn2" WNJ SMILES CACTVS 3.385 "C1C[CH](CN1)CNc2ccccn2" WNJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)NC[C@@H]2CCNC2" WNJ SMILES "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)NCC2CCNC2" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WNJ "SYSTEMATIC NAME" ACDLabs 12.01 "N-{[(3R)-pyrrolidin-3-yl]methyl}pyridin-2-amine" WNJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[[(3~{R})-pyrrolidin-3-yl]methyl]pyridin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WNJ "Create component" 2020-10-30 RCSB WNJ "Initial release" 2020-11-11 RCSB ##