data_WO9 # _chem_comp.id WO9 _chem_comp.name "(2R)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(dodecanoyloxy)propyl heptadecanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H68 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-04 _chem_comp.pdbx_modified_date 2023-03-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 649.879 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WO9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8EOG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WO9 C02 C1 C 0 1 N N N 178.285 169.247 181.067 19.205 3.681 -0.465 C02 WO9 1 WO9 C03 C2 C 0 1 N N N 177.111 168.935 180.142 17.870 3.450 -1.176 C03 WO9 2 WO9 C04 C3 C 0 1 N N N 177.411 169.467 178.744 16.814 3.026 -0.152 C04 WO9 3 WO9 C05 C4 C 0 1 N N N 176.232 169.167 177.823 15.479 2.795 -0.863 C05 WO9 4 WO9 C06 C5 C 0 1 N N N 176.441 169.879 176.490 14.424 2.372 0.161 C06 WO9 5 WO9 C07 C6 C 0 1 N N N 175.275 169.579 175.552 13.088 2.141 -0.549 C07 WO9 6 WO9 C08 C7 C 0 1 N N N 175.041 170.787 174.649 12.033 1.717 0.474 C08 WO9 7 WO9 C09 C8 C 0 1 N N N 174.326 170.361 173.369 10.698 1.486 -0.236 C09 WO9 8 WO9 C10 C9 C 0 1 N N N 174.624 171.357 172.251 9.642 1.063 0.787 C10 WO9 9 WO9 C11 C10 C 0 1 N N N 176.092 171.763 172.302 8.307 0.831 0.077 C11 WO9 10 WO9 C12 C11 C 0 1 N N N 176.315 173.023 171.475 7.251 0.408 1.100 C12 WO9 11 WO9 C13 C12 C 0 1 N N N 177.354 173.895 172.173 5.916 0.177 0.390 C13 WO9 12 WO9 C14 C13 C 0 1 N N N 178.121 174.708 171.135 4.860 -0.247 1.413 C14 WO9 13 WO9 C15 C14 C 0 1 N N N 179.610 174.671 171.466 3.525 -0.478 0.703 C15 WO9 14 WO9 C16 C15 C 0 1 N N N 180.326 175.765 170.679 2.470 -0.901 1.726 C16 WO9 15 WO9 C17 C16 C 0 1 N N N 181.370 176.440 171.562 1.134 -1.133 1.016 C17 WO9 16 WO9 C18 C17 C 0 1 N N N 181.637 177.838 171.016 0.095 -1.550 2.024 C18 WO9 17 WO9 C21 C18 C 0 1 N N N 183.328 179.472 171.060 -2.109 -2.204 2.651 C21 WO9 18 WO9 C22 C19 C 0 1 N N R 182.755 180.810 170.596 -3.477 -2.455 2.011 C22 WO9 19 WO9 C23 C20 C 0 1 N N N 183.760 181.926 170.868 -3.333 -3.479 0.884 C23 WO9 20 WO9 C29 C21 C 0 1 N N N 181.217 184.585 170.847 -0.416 -3.427 -3.515 C29 WO9 21 WO9 C30 C22 C 0 1 N N N 180.610 185.928 171.252 0.555 -2.383 -4.070 C30 WO9 22 WO9 C33 C23 C 0 1 N N N 180.458 181.227 170.459 -5.327 -1.064 1.444 C33 WO9 23 WO9 C35 C24 C 0 1 N N N 179.078 180.783 170.933 -5.936 0.201 0.897 C35 WO9 24 WO9 C36 C25 C 0 1 N N N 178.410 179.937 169.854 -7.461 0.110 0.980 C36 WO9 25 WO9 C37 C26 C 0 1 N N N 177.428 178.976 170.518 -8.080 1.395 0.425 C37 WO9 26 WO9 C38 C27 C 0 1 N N N 176.519 178.355 169.461 -9.605 1.304 0.509 C38 WO9 27 WO9 C39 C28 C 0 1 N N N 175.598 177.340 170.135 -10.223 2.589 -0.047 C39 WO9 28 WO9 C40 C29 C 0 1 N N N 175.102 176.333 169.100 -11.748 2.499 0.037 C40 WO9 29 WO9 C41 C30 C 0 1 N N N 173.609 176.094 169.307 -12.366 3.783 -0.518 C41 WO9 30 WO9 C42 C31 C 0 1 N N N 173.331 174.593 169.318 -13.892 3.693 -0.434 C42 WO9 31 WO9 C43 C32 C 0 1 N N N 171.954 174.341 169.925 -14.510 4.977 -0.990 C43 WO9 32 WO9 C44 C33 C 0 1 N N N 171.235 173.267 169.114 -16.035 4.887 -0.906 C44 WO9 33 WO9 C45 C34 C 0 1 N N N 169.972 172.833 169.855 -16.653 6.172 -1.461 C45 WO9 34 WO9 N31 N1 N 0 1 N N N 179.739 186.404 170.191 1.748 -2.320 -3.214 N31 WO9 35 WO9 O19 O1 O 0 1 N N N 181.232 178.128 169.943 0.391 -1.651 3.191 O19 WO9 36 WO9 O20 O2 O 0 1 N N N 182.353 178.767 171.777 -1.161 -1.808 1.625 O20 WO9 37 WO9 O24 O3 O 0 1 N N N 183.943 182.673 169.701 -2.343 -3.031 -0.044 O24 WO9 38 WO9 O26 O4 O 0 1 N N N 184.773 185.100 169.729 -1.246 -5.253 -0.920 O26 WO9 39 WO9 O27 O5 O 0 1 N N N 182.944 184.691 168.472 -3.141 -4.144 -2.164 O27 WO9 40 WO9 O28 O6 O 0 1 N N N 182.604 184.622 171.017 -0.890 -3.005 -2.235 O28 WO9 41 WO9 O32 O7 O 0 1 N N N 181.569 181.067 171.289 -3.993 -1.210 1.471 O32 WO9 42 WO9 O34 O8 O 0 1 N N N 180.585 181.713 169.387 -6.040 -1.948 1.858 O34 WO9 43 WO9 P25 P1 P 0 1 N N N 183.568 184.276 169.725 -1.932 -3.864 -1.359 P25 WO9 44 WO9 H1 H1 H 0 1 N N N 178.070 168.864 182.075 19.957 3.983 -1.194 H1 WO9 45 WO9 H2 H2 H 0 1 N N N 179.195 168.767 180.679 19.088 4.466 0.282 H2 WO9 46 WO9 H3 H3 H 0 1 N N N 178.436 170.336 181.113 19.521 2.759 0.023 H3 WO9 47 WO9 H4 H4 H 0 1 N N N 176.201 169.415 180.530 17.554 4.372 -1.663 H4 WO9 48 WO9 H5 H5 H 0 1 N N N 176.960 167.846 180.096 17.987 2.665 -1.923 H5 WO9 49 WO9 H6 H6 H 0 1 N N N 178.316 168.979 178.352 17.131 2.105 0.336 H6 WO9 50 WO9 H7 H7 H 0 1 N N N 177.572 170.554 178.792 16.697 3.812 0.595 H7 WO9 51 WO9 H8 H8 H 0 1 N N N 175.302 169.524 178.289 15.163 3.717 -1.350 H8 WO9 52 WO9 H9 H9 H 0 1 N N N 176.164 168.082 177.654 15.596 2.010 -1.610 H9 WO9 53 WO9 H10 H10 H 0 1 N N N 177.377 169.528 176.032 14.740 1.450 0.649 H10 WO9 54 WO9 H11 H11 H 0 1 N N N 176.501 170.964 176.662 14.306 3.157 0.908 H11 WO9 55 WO9 H12 H12 H 0 1 N N N 174.369 169.379 176.142 12.772 3.062 -1.038 H12 WO9 56 WO9 H13 H13 H 0 1 N N N 175.514 168.699 174.937 13.205 1.356 -1.297 H13 WO9 57 WO9 H14 H14 H 0 1 N N N 176.010 171.240 174.390 12.349 0.795 0.962 H14 WO9 58 WO9 H15 H15 H 0 1 N N N 174.423 171.524 175.182 11.916 2.502 1.221 H15 WO9 59 WO9 H16 H16 H 0 1 N N N 173.241 170.330 173.550 10.381 2.408 -0.725 H16 WO9 60 WO9 H17 H17 H 0 1 N N N 174.677 169.362 173.071 10.815 0.701 -0.984 H17 WO9 61 WO9 H18 H18 H 0 1 N N N 173.993 172.249 172.379 9.958 0.141 1.275 H18 WO9 62 WO9 H19 H19 H 0 1 N N N 174.407 170.891 171.279 9.525 1.847 1.534 H19 WO9 63 WO9 H20 H20 H 0 1 N N N 176.709 170.948 171.897 7.990 1.753 -0.411 H20 WO9 64 WO9 H21 H21 H 0 1 N N N 176.380 171.957 173.346 8.424 0.046 -0.670 H21 WO9 65 WO9 H22 H22 H 0 1 N N N 175.369 173.577 171.384 7.568 -0.514 1.588 H22 WO9 66 WO9 H23 H23 H 0 1 N N N 176.677 172.748 170.473 7.134 1.193 1.847 H23 WO9 67 WO9 H24 H24 H 0 1 N N N 178.056 173.255 172.728 5.600 1.099 -0.098 H24 WO9 68 WO9 H25 H25 H 0 1 N N N 176.849 174.578 172.872 6.033 -0.608 -0.357 H25 WO9 69 WO9 H26 H26 H 0 1 N N N 177.767 175.749 171.149 5.177 -1.169 1.901 H26 WO9 70 WO9 H27 H27 H 0 1 N N N 177.956 174.278 170.136 4.743 0.538 2.160 H27 WO9 71 WO9 H28 H28 H 0 1 N N N 180.024 173.689 171.191 3.209 0.444 0.215 H28 WO9 72 WO9 H29 H29 H 0 1 N N N 179.752 174.840 172.544 3.642 -1.263 -0.045 H29 WO9 73 WO9 H30 H30 H 0 1 N N N 180.821 175.320 169.803 2.786 -1.823 2.214 H30 WO9 74 WO9 H31 H31 H 0 1 N N N 179.592 176.513 170.344 2.352 -0.116 2.473 H31 WO9 75 WO9 H32 H32 H 0 1 N N N 180.994 176.510 172.593 0.818 -0.211 0.528 H32 WO9 76 WO9 H33 H33 H 0 1 N N N 182.301 175.854 171.550 1.252 -1.918 0.269 H33 WO9 77 WO9 H34 H34 H 0 1 N N N 183.636 178.882 170.184 -2.195 -1.411 3.393 H34 WO9 78 WO9 H35 H35 H 0 1 N N N 184.200 179.651 171.707 -1.762 -3.118 3.134 H35 WO9 79 WO9 H36 H36 H 0 1 N N N 182.567 180.758 169.513 -4.165 -2.837 2.764 H36 WO9 80 WO9 H37 H37 H 0 1 N N N 184.720 181.489 171.180 -3.030 -4.439 1.302 H37 WO9 81 WO9 H38 H38 H 0 1 N N N 183.378 182.579 171.667 -4.288 -3.592 0.371 H38 WO9 82 WO9 H39 H39 H 0 1 N N N 180.984 184.382 169.791 -1.259 -3.537 -4.197 H39 WO9 83 WO9 H40 H40 H 0 1 N N N 180.793 183.788 171.476 0.097 -4.383 -3.415 H40 WO9 84 WO9 H41 H41 H 0 1 N N N 181.415 186.658 171.421 0.848 -2.660 -5.082 H41 WO9 85 WO9 H42 H42 H 0 1 N N N 180.027 185.803 172.177 0.068 -1.407 -4.087 H42 WO9 86 WO9 H43 H43 H 0 1 N N N 178.459 181.669 171.138 -5.590 1.053 1.482 H43 WO9 87 WO9 H44 H44 H 0 1 N N N 179.181 180.188 171.852 -5.636 0.328 -0.144 H44 WO9 88 WO9 H45 H45 H 0 1 N N N 179.174 179.365 169.307 -7.807 -0.742 0.396 H45 WO9 89 WO9 H46 H46 H 0 1 N N N 177.870 180.591 169.153 -7.761 -0.017 2.021 H46 WO9 90 WO9 H47 H47 H 0 1 N N N 176.816 179.526 171.249 -7.734 2.247 1.010 H47 WO9 91 WO9 H48 H48 H 0 1 N N N 177.987 178.180 171.032 -7.780 1.522 -0.615 H48 WO9 92 WO9 H49 H49 H 0 1 N N N 177.130 177.850 168.699 -9.951 0.452 -0.076 H49 WO9 93 WO9 H50 H50 H 0 1 N N N 175.916 179.142 168.985 -9.905 1.177 1.549 H50 WO9 94 WO9 H51 H51 H 0 1 N N N 174.738 177.864 170.578 -9.877 3.441 0.538 H51 WO9 95 WO9 H52 H52 H 0 1 N N N 176.152 176.811 170.925 -9.923 2.716 -1.087 H52 WO9 96 WO9 H53 H53 H 0 1 N N N 175.646 175.385 169.219 -12.094 1.646 -0.548 H53 WO9 97 WO9 H54 H54 H 0 1 N N N 175.274 176.730 168.089 -12.048 2.371 1.077 H54 WO9 98 WO9 H55 H55 H 0 1 N N N 173.297 176.532 170.267 -12.020 4.635 0.067 H55 WO9 99 WO9 H56 H56 H 0 1 N N N 173.045 176.565 168.489 -12.067 3.911 -1.558 H56 WO9 100 WO9 H57 H57 H 0 1 N N N 173.355 174.207 168.288 -14.238 2.841 -1.019 H57 WO9 101 WO9 H58 H58 H 0 1 N N N 174.097 174.082 169.919 -14.191 3.565 0.606 H58 WO9 102 WO9 H59 H59 H 0 1 N N N 171.367 175.271 169.905 -14.164 5.830 -0.405 H59 WO9 103 WO9 H60 H60 H 0 1 N N N 172.067 174.002 170.965 -14.210 5.105 -2.030 H60 WO9 104 WO9 H61 H61 H 0 1 N N N 171.899 172.400 168.982 -16.381 4.035 -1.491 H61 WO9 105 WO9 H62 H62 H 0 1 N N N 170.961 173.673 168.129 -16.335 4.760 0.134 H62 WO9 106 WO9 H63 H63 H 0 1 N N N 169.452 172.059 169.272 -17.740 6.107 -1.401 H63 WO9 107 WO9 H64 H64 H 0 1 N N N 170.246 172.428 170.840 -16.307 7.024 -0.876 H64 WO9 108 WO9 H65 H65 H 0 1 N N N 169.308 173.700 169.987 -16.353 6.299 -2.501 H65 WO9 109 WO9 H66 H66 H 0 1 N N N 179.341 187.283 170.455 2.405 -1.637 -3.560 H66 WO9 110 WO9 H67 H67 H 0 1 N N N 180.269 186.517 169.350 1.496 -2.128 -2.256 H67 WO9 111 WO9 H69 H69 H 0 1 N N N 184.791 185.639 168.947 -0.445 -5.146 -0.388 H69 WO9 112 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WO9 O27 P25 DOUB N N 1 WO9 C40 C41 SING N N 2 WO9 C40 C39 SING N N 3 WO9 C44 C45 SING N N 4 WO9 C44 C43 SING N N 5 WO9 C41 C42 SING N N 6 WO9 C42 C43 SING N N 7 WO9 O34 C33 DOUB N N 8 WO9 C38 C39 SING N N 9 WO9 C38 C37 SING N N 10 WO9 O24 P25 SING N N 11 WO9 O24 C23 SING N N 12 WO9 P25 O26 SING N N 13 WO9 P25 O28 SING N N 14 WO9 C36 C37 SING N N 15 WO9 C36 C35 SING N N 16 WO9 O19 C18 DOUB N N 17 WO9 N31 C30 SING N N 18 WO9 C33 C35 SING N N 19 WO9 C33 O32 SING N N 20 WO9 C22 C23 SING N N 21 WO9 C22 C21 SING N N 22 WO9 C22 O32 SING N N 23 WO9 C16 C15 SING N N 24 WO9 C16 C17 SING N N 25 WO9 C29 O28 SING N N 26 WO9 C29 C30 SING N N 27 WO9 C18 C17 SING N N 28 WO9 C18 O20 SING N N 29 WO9 C21 O20 SING N N 30 WO9 C14 C15 SING N N 31 WO9 C14 C13 SING N N 32 WO9 C12 C13 SING N N 33 WO9 C12 C11 SING N N 34 WO9 C10 C11 SING N N 35 WO9 C10 C09 SING N N 36 WO9 C09 C08 SING N N 37 WO9 C08 C07 SING N N 38 WO9 C07 C06 SING N N 39 WO9 C06 C05 SING N N 40 WO9 C05 C04 SING N N 41 WO9 C04 C03 SING N N 42 WO9 C03 C02 SING N N 43 WO9 C02 H1 SING N N 44 WO9 C02 H2 SING N N 45 WO9 C02 H3 SING N N 46 WO9 C03 H4 SING N N 47 WO9 C03 H5 SING N N 48 WO9 C04 H6 SING N N 49 WO9 C04 H7 SING N N 50 WO9 C05 H8 SING N N 51 WO9 C05 H9 SING N N 52 WO9 C06 H10 SING N N 53 WO9 C06 H11 SING N N 54 WO9 C07 H12 SING N N 55 WO9 C07 H13 SING N N 56 WO9 C08 H14 SING N N 57 WO9 C08 H15 SING N N 58 WO9 C09 H16 SING N N 59 WO9 C09 H17 SING N N 60 WO9 C10 H18 SING N N 61 WO9 C10 H19 SING N N 62 WO9 C11 H20 SING N N 63 WO9 C11 H21 SING N N 64 WO9 C12 H22 SING N N 65 WO9 C12 H23 SING N N 66 WO9 C13 H24 SING N N 67 WO9 C13 H25 SING N N 68 WO9 C14 H26 SING N N 69 WO9 C14 H27 SING N N 70 WO9 C15 H28 SING N N 71 WO9 C15 H29 SING N N 72 WO9 C16 H30 SING N N 73 WO9 C16 H31 SING N N 74 WO9 C17 H32 SING N N 75 WO9 C17 H33 SING N N 76 WO9 C21 H34 SING N N 77 WO9 C21 H35 SING N N 78 WO9 C22 H36 SING N N 79 WO9 C23 H37 SING N N 80 WO9 C23 H38 SING N N 81 WO9 C29 H39 SING N N 82 WO9 C29 H40 SING N N 83 WO9 C30 H41 SING N N 84 WO9 C30 H42 SING N N 85 WO9 C35 H43 SING N N 86 WO9 C35 H44 SING N N 87 WO9 C36 H45 SING N N 88 WO9 C36 H46 SING N N 89 WO9 C37 H47 SING N N 90 WO9 C37 H48 SING N N 91 WO9 C38 H49 SING N N 92 WO9 C38 H50 SING N N 93 WO9 C39 H51 SING N N 94 WO9 C39 H52 SING N N 95 WO9 C40 H53 SING N N 96 WO9 C40 H54 SING N N 97 WO9 C41 H55 SING N N 98 WO9 C41 H56 SING N N 99 WO9 C42 H57 SING N N 100 WO9 C42 H58 SING N N 101 WO9 C43 H59 SING N N 102 WO9 C43 H60 SING N N 103 WO9 C44 H61 SING N N 104 WO9 C44 H62 SING N N 105 WO9 C45 H63 SING N N 106 WO9 C45 H64 SING N N 107 WO9 C45 H65 SING N N 108 WO9 N31 H66 SING N N 109 WO9 N31 H67 SING N N 110 WO9 O26 H69 SING N N 111 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WO9 SMILES ACDLabs 12.01 "NCCOP(O)(=O)OCC(COC(=O)CCCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCC" WO9 InChI InChI 1.06 "InChI=1S/C34H68NO8P/c1-3-5-7-9-11-13-14-15-16-17-19-20-22-24-26-33(36)40-30-32(31-42-44(38,39)41-29-28-35)43-34(37)27-25-23-21-18-12-10-8-6-4-2/h32H,3-31,35H2,1-2H3,(H,38,39)/t32-/m1/s1" WO9 InChIKey InChI 1.06 YIIGGWPZRIXGNH-JGCGQSQUSA-N WO9 SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCCCCC" WO9 SMILES CACTVS 3.385 "CCCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCCCCC" WO9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCC" WO9 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WO9 "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(dodecanoyloxy)propyl heptadecanoate" WO9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R})-3-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-2-dodecanoyloxy-propyl] heptadecanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WO9 "Create component" 2022-10-04 RCSB WO9 "Initial release" 2023-03-22 RCSB #