data_WP2 # _chem_comp.id WP2 _chem_comp.name "(5~{S})-7-[[2,6-bis(fluoranyl)phenyl]methyl]-3-(3-methylthiophen-2-yl)-1-oxa-2,7-diazaspiro[4.4]non-2-en-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H16 F2 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-10 _chem_comp.pdbx_modified_date 2024-02-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.394 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WP2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QRT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WP2 C1 C1 C 0 1 N N N N N N -12.062 -1.207 19.635 5.504 1.628 0.211 C1 WP2 1 WP2 C2 C2 C 0 1 Y N N N N N -11.604 0.109 20.174 5.251 0.172 -0.083 C2 WP2 2 WP2 C4 C3 C 0 1 Y N N N N N -11.932 2.261 20.829 5.867 -1.976 -0.590 C4 WP2 3 WP2 C7 C4 C 0 1 N N N N N N -9.197 -0.532 20.489 2.755 0.360 0.153 C7 WP2 4 WP2 C10 C5 C 0 1 N N S N N N -7.206 -1.631 21.159 0.471 1.021 0.096 C10 WP2 5 WP2 C11 C6 C 0 1 N N N N N N -5.704 -1.711 20.950 0.024 1.336 -1.337 C11 WP2 6 WP2 C12 C7 C 0 1 N N N N N N -5.167 -1.952 22.376 -1.395 1.906 -1.097 C12 WP2 7 WP2 N13 N1 N 0 1 N N N N N N -6.326 -2.335 23.208 -1.834 1.340 0.186 N13 WP2 8 WP2 C14 C8 C 0 1 N N N N N N -6.208 -2.764 24.609 -3.225 1.314 0.645 C14 WP2 9 WP2 C16 C9 C 0 1 Y N N N N N -5.436 -5.126 24.712 -3.843 -1.090 0.980 C16 WP2 10 WP2 C20 C10 C 0 1 Y N N N N N -7.880 -5.989 25.709 -5.137 -1.171 -1.465 C20 WP2 11 WP2 C21 C11 C 0 1 Y N N N N N -7.658 -4.667 25.411 -4.531 0.000 -1.041 C21 WP2 12 WP2 C23 C12 C 0 1 N N N N N N -7.489 -2.151 22.551 -0.792 0.847 0.885 C23 WP2 13 WP2 C3 C13 C 0 1 Y N N N N N -12.475 1.146 20.357 6.264 -0.721 -0.350 C3 WP2 14 WP2 S5 S1 S 0 1 Y N N N N N -10.202 2.064 21.129 4.116 -2.085 -0.480 S5 WP2 15 WP2 C6 C14 C 0 1 Y N N N N N -10.322 0.384 20.559 4.001 -0.371 -0.102 C6 WP2 16 WP2 N8 N2 N 0 1 N N N N N N -9.200 -1.737 20.034 2.657 1.624 0.426 N8 WP2 17 WP2 O9 O1 O 0 1 N N N N N N -7.896 -2.319 20.117 1.317 2.040 0.628 O9 WP2 18 WP2 C15 C15 C 0 1 Y N N N N N -6.438 -4.221 24.924 -3.884 0.040 0.182 C15 WP2 19 WP2 F17 F1 F 0 1 N N N N N N -4.238 -4.694 24.233 -3.216 -1.051 2.176 F17 WP2 20 WP2 C18 C16 C 0 1 Y N N N N N -5.637 -6.453 25.010 -4.449 -2.260 0.554 C18 WP2 21 WP2 C19 C17 C 0 1 Y N N N N N -6.843 -6.880 25.515 -5.095 -2.299 -0.668 C19 WP2 22 WP2 F22 F2 F 0 1 N N N N N N -8.642 -3.808 25.616 -4.572 1.103 -1.820 F22 WP2 23 WP2 O24 O2 O 0 1 N N N N N N -8.591 -2.400 23.018 -0.865 0.341 1.985 O24 WP2 24 WP2 C25 C18 C 0 1 N N N N N N -7.780 -0.220 20.940 1.355 -0.231 0.136 C25 WP2 25 WP2 H1 H1 H 0 1 N N N N N N -11.970 -1.207 18.539 5.491 2.195 -0.720 H1 WP2 26 WP2 H2 H2 H 0 1 N N N N N N -11.440 -2.011 20.055 4.728 2.005 0.877 H2 WP2 27 WP2 H3 H3 H 0 1 N N N N N N -13.113 -1.372 19.915 6.478 1.738 0.689 H3 WP2 28 WP2 H4 H4 H 0 1 N N N N N N -12.479 3.175 21.007 6.526 -2.801 -0.818 H4 WP2 29 WP2 H5 H5 H 0 1 N N N N N N -5.442 -2.545 20.283 0.673 2.083 -1.793 H5 WP2 30 WP2 H6 H6 H 0 1 N N N N N N -5.312 -0.771 20.534 -0.015 0.431 -1.942 H6 WP2 31 WP2 H7 H7 H 0 1 N N N N N N -4.422 -2.761 22.369 -1.360 2.993 -1.036 H7 WP2 32 WP2 H8 H8 H 0 1 N N N N N N -4.706 -1.033 22.768 -2.066 1.593 -1.897 H8 WP2 33 WP2 H9 H9 H 0 1 N N N N N N -5.190 -2.513 24.943 -3.249 1.360 1.734 H9 WP2 34 WP2 H10 H10 H 0 1 N N N N N N -6.939 -2.184 25.192 -3.760 2.170 0.234 H10 WP2 35 WP2 H11 H11 H 0 1 N N N N N N -8.837 -6.322 26.084 -5.642 -1.202 -2.419 H11 WP2 36 WP2 H12 H12 H 0 1 N N N N N N -13.528 1.064 20.134 7.304 -0.430 -0.366 H12 WP2 37 WP2 H13 H13 H 0 1 N N N N N N -4.842 -7.165 24.846 -4.417 -3.142 1.176 H13 WP2 38 WP2 H14 H14 H 0 1 N N N N N N -6.980 -7.922 25.762 -5.567 -3.212 -0.999 H14 WP2 39 WP2 H15 H15 H 0 1 N N N N N N -7.222 0.324 20.163 1.204 -0.843 -0.754 H15 WP2 40 WP2 H16 H16 H 0 1 N N N N N N -7.775 0.364 21.872 1.167 -0.808 1.041 H16 WP2 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WP2 C1 C2 SING N N 1 WP2 N8 O9 SING N N 2 WP2 N8 C7 DOUB N N 3 WP2 O9 C10 SING N N 4 WP2 C2 C3 SING Y N 5 WP2 C2 C6 DOUB Y N 6 WP2 C3 C4 DOUB Y N 7 WP2 C7 C6 SING N N 8 WP2 C7 C25 SING N N 9 WP2 C6 S5 SING Y N 10 WP2 C4 S5 SING Y N 11 WP2 C25 C10 SING N N 12 WP2 C11 C10 SING N N 13 WP2 C11 C12 SING N N 14 WP2 C10 C23 SING N N 15 WP2 C12 N13 SING N N 16 WP2 C23 O24 DOUB N N 17 WP2 C23 N13 SING N N 18 WP2 N13 C14 SING N N 19 WP2 F17 C16 SING N N 20 WP2 C14 C15 SING N N 21 WP2 C16 C15 DOUB Y N 22 WP2 C16 C18 SING Y N 23 WP2 C15 C21 SING Y N 24 WP2 C18 C19 DOUB Y N 25 WP2 C21 F22 SING N N 26 WP2 C21 C20 DOUB Y N 27 WP2 C19 C20 SING Y N 28 WP2 C1 H1 SING N N 29 WP2 C1 H2 SING N N 30 WP2 C1 H3 SING N N 31 WP2 C4 H4 SING N N 32 WP2 C11 H5 SING N N 33 WP2 C11 H6 SING N N 34 WP2 C12 H7 SING N N 35 WP2 C12 H8 SING N N 36 WP2 C14 H9 SING N N 37 WP2 C14 H10 SING N N 38 WP2 C20 H11 SING N N 39 WP2 C3 H12 SING N N 40 WP2 C18 H13 SING N N 41 WP2 C19 H14 SING N N 42 WP2 C25 H15 SING N N 43 WP2 C25 H16 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WP2 InChI InChI 1.06 "InChI=1S/C18H16F2N2O2S/c1-11-5-8-25-16(11)15-9-18(24-21-15)6-7-22(17(18)23)10-12-13(19)3-2-4-14(12)20/h2-5,8H,6-7,9-10H2,1H3/t18-/m0/s1" WP2 InChIKey InChI 1.06 LDAZTXWVKWXAJU-SFHVURJKSA-N WP2 SMILES_CANONICAL CACTVS 3.385 "Cc1ccsc1C2=NO[C@@]3(CCN(Cc4c(F)cccc4F)C3=O)C2" WP2 SMILES CACTVS 3.385 "Cc1ccsc1C2=NO[C]3(CCN(Cc4c(F)cccc4F)C3=O)C2" WP2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccsc1C2=NO[C@]3(C2)CCN(C3=O)Cc4c(cccc4F)F" WP2 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccsc1C2=NOC3(C2)CCN(C3=O)Cc4c(cccc4F)F" # _pdbx_chem_comp_identifier.comp_id WP2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S})-7-[[2,6-bis(fluoranyl)phenyl]methyl]-3-(3-methylthiophen-2-yl)-1-oxa-2,7-diazaspiro[4.4]non-2-en-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WP2 "Create component" 2023-10-10 PDBE WP2 "Initial release" 2024-02-21 RCSB #