data_WPJ # _chem_comp.id WPJ _chem_comp.name "(2R)-2-[(3-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)methyl]-3,3-difluoropropanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H24 F2 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-03 _chem_comp.pdbx_modified_date 2021-07-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.415 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WPJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KM9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WPJ C01 C1 C 0 1 N N N -23.223 20.206 -4.975 -5.264 3.417 -0.168 C01 WPJ 1 WPJ C02 C2 C 0 1 N N N -22.258 19.318 -4.146 -5.080 2.183 -1.054 C02 WPJ 2 WPJ C03 C3 C 0 1 Y N N -20.903 19.506 -4.740 -5.887 1.039 -0.497 C03 WPJ 3 WPJ C05 C4 C 0 1 Y N N -19.068 20.837 -4.968 -7.861 -0.148 -0.402 C05 WPJ 4 WPJ C08 C5 C 0 1 Y N N -19.077 18.864 -6.120 -6.119 -0.871 0.924 C08 WPJ 5 WPJ C10 C6 C 0 1 Y N N -20.359 18.592 -5.595 -5.330 0.175 0.429 C10 WPJ 6 WPJ C12 C7 C 0 1 N N N -21.599 17.271 -7.235 -3.029 -0.338 0.103 C12 WPJ 7 WPJ C13 C8 C 0 1 N N N -22.537 16.067 -7.172 -1.661 -0.039 0.719 C13 WPJ 8 WPJ C14 C9 C 0 1 N N N -23.900 16.472 -6.601 -0.573 -0.761 -0.079 C14 WPJ 9 WPJ C16 C10 C 0 1 Y N N -25.509 18.279 -7.064 1.786 -1.052 -0.098 C16 WPJ 10 WPJ C17 C11 C 0 1 Y N N -26.518 17.754 -6.268 1.621 -1.862 -1.211 C17 WPJ 11 WPJ C18 C12 C 0 1 Y N N -27.605 18.559 -5.939 2.723 -2.436 -1.816 C18 WPJ 12 WPJ C19 C13 C 0 1 Y N N -27.694 19.867 -6.376 3.989 -2.202 -1.313 C19 WPJ 13 WPJ C20 C14 C 0 1 Y N N -26.681 20.399 -7.172 4.156 -1.395 -0.203 C20 WPJ 14 WPJ C21 C15 C 0 1 N N N -26.761 21.848 -7.637 5.538 -1.142 0.343 C21 WPJ 15 WPJ C22 C16 C 0 1 N N R -27.824 22.110 -8.730 6.134 0.097 -0.330 C22 WPJ 16 WPJ C23 C17 C 0 1 N N N -28.721 23.277 -8.374 5.314 1.330 0.055 C23 WPJ 17 WPJ C26 C18 C 0 1 N N N -27.152 22.419 -10.115 7.559 0.278 0.124 C26 WPJ 18 WPJ C29 C19 C 0 1 Y N N -25.586 19.597 -7.511 3.058 -0.819 0.405 C29 WPJ 19 WPJ F24 F1 F 0 1 N N N -29.415 22.972 -7.210 5.437 1.561 1.429 F24 WPJ 20 WPJ F25 F2 F 0 1 N N N -27.993 24.439 -8.074 5.788 2.443 -0.649 F25 WPJ 21 WPJ N04 N1 N 0 1 Y N N -20.274 20.642 -4.428 -7.142 0.852 -0.884 N04 WPJ 22 WPJ N06 N2 N 0 1 N N N -18.419 21.974 -4.675 -9.169 -0.308 -0.833 N06 WPJ 23 WPJ N07 N3 N 0 1 Y N N -18.454 20.001 -5.813 -7.365 -1.001 0.482 N07 WPJ 24 WPJ N09 N4 N 0 1 N N N -18.469 17.988 -6.948 -5.602 -1.766 1.849 N09 WPJ 25 WPJ O11 O1 O 0 1 N N N -20.993 17.399 -5.897 -4.045 0.337 0.848 O11 WPJ 26 WPJ O15 O2 O 0 1 N N N -24.391 17.536 -7.431 0.705 -0.482 0.496 O15 WPJ 27 WPJ O27 O3 O 0 1 N N N -27.971 22.637 -11.050 8.048 -0.502 0.905 O27 WPJ 28 WPJ O28 O4 O 0 1 N N N -25.897 22.412 -10.109 8.285 1.308 -0.340 O28 WPJ 29 WPJ H1 H1 H 0 1 N N N -24.245 20.107 -4.579 -4.680 4.244 -0.571 H1 WPJ 30 WPJ H2 H2 H 0 1 N N N -22.904 21.257 -4.907 -6.318 3.693 -0.145 H2 WPJ 31 WPJ H3 H3 H 0 1 N N N -23.205 19.885 -6.027 -4.925 3.192 0.843 H3 WPJ 32 WPJ H4 H4 H 0 1 N N N -22.259 19.634 -3.092 -5.419 2.408 -2.066 H4 WPJ 33 WPJ H5 H5 H 0 1 N N N -22.560 18.262 -4.212 -4.026 1.907 -1.077 H5 WPJ 34 WPJ H6 H6 H 0 1 N N N -20.818 17.105 -7.992 -3.046 0.009 -0.930 H6 WPJ 35 WPJ H7 H7 H 0 1 N N N -22.165 18.181 -7.485 -3.212 -1.412 0.129 H7 WPJ 36 WPJ H8 H8 H 0 1 N N N -22.676 15.664 -8.186 -1.477 1.035 0.693 H8 WPJ 37 WPJ H9 H9 H 0 1 N N N -22.091 15.295 -6.528 -1.644 -0.386 1.752 H9 WPJ 38 WPJ H10 H10 H 0 1 N N N -23.789 16.820 -5.563 -0.757 -1.836 -0.053 H10 WPJ 39 WPJ H11 H11 H 0 1 N N N -24.593 15.618 -6.629 -0.590 -0.415 -1.112 H11 WPJ 40 WPJ H12 H12 H 0 1 N N N -26.461 16.737 -5.910 0.632 -2.046 -1.604 H12 WPJ 41 WPJ H13 H13 H 0 1 N N N -28.397 18.152 -5.328 2.595 -3.067 -2.683 H13 WPJ 42 WPJ H14 H14 H 0 1 N N N -28.544 20.474 -6.102 4.849 -2.651 -1.788 H14 WPJ 43 WPJ H15 H15 H 0 1 N N N -25.778 22.136 -8.037 5.479 -0.978 1.419 H15 WPJ 44 WPJ H16 H16 H 0 1 N N N -27.001 22.476 -6.766 6.172 -2.005 0.141 H16 WPJ 45 WPJ H17 H17 H 0 1 N N N -28.441 21.206 -8.841 6.110 -0.032 -1.413 H17 WPJ 46 WPJ H18 H18 H 0 1 N N N -29.416 23.461 -9.206 4.266 1.162 -0.193 H18 WPJ 47 WPJ H19 H19 H 0 1 N N N -24.794 20.002 -8.124 3.189 -0.188 1.272 H19 WPJ 48 WPJ H20 H20 H 0 1 N N N -17.547 21.997 -5.165 -9.545 0.308 -1.480 H20 WPJ 49 WPJ H21 H21 H 0 1 N N N -18.977 22.757 -4.951 -9.708 -1.038 -0.488 H21 WPJ 50 WPJ H22 H22 H 0 1 N N N -17.580 18.352 -7.225 -6.152 -2.494 2.178 H22 WPJ 51 WPJ H23 H23 H 0 1 N N N -18.340 17.117 -6.475 -4.691 -1.664 2.167 H23 WPJ 52 WPJ H24 H24 H 0 1 N N N -25.575 22.610 -10.980 9.195 1.383 -0.021 H24 WPJ 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WPJ O27 C26 DOUB N N 1 WPJ C26 O28 SING N N 2 WPJ C26 C22 SING N N 3 WPJ C22 C23 SING N N 4 WPJ C22 C21 SING N N 5 WPJ C23 F25 SING N N 6 WPJ C23 F24 SING N N 7 WPJ C21 C20 SING N N 8 WPJ C29 C20 DOUB Y N 9 WPJ C29 C16 SING Y N 10 WPJ O15 C16 SING N N 11 WPJ O15 C14 SING N N 12 WPJ C12 C13 SING N N 13 WPJ C12 O11 SING N N 14 WPJ C20 C19 SING Y N 15 WPJ C13 C14 SING N N 16 WPJ C16 C17 DOUB Y N 17 WPJ N09 C08 SING N N 18 WPJ C19 C18 DOUB Y N 19 WPJ C17 C18 SING Y N 20 WPJ C08 N07 DOUB Y N 21 WPJ C08 C10 SING Y N 22 WPJ O11 C10 SING N N 23 WPJ N07 C05 SING Y N 24 WPJ C10 C03 DOUB Y N 25 WPJ C01 C02 SING N N 26 WPJ C05 N06 SING N N 27 WPJ C05 N04 DOUB Y N 28 WPJ C03 N04 SING Y N 29 WPJ C03 C02 SING N N 30 WPJ C01 H1 SING N N 31 WPJ C01 H2 SING N N 32 WPJ C01 H3 SING N N 33 WPJ C02 H4 SING N N 34 WPJ C02 H5 SING N N 35 WPJ C12 H6 SING N N 36 WPJ C12 H7 SING N N 37 WPJ C13 H8 SING N N 38 WPJ C13 H9 SING N N 39 WPJ C14 H10 SING N N 40 WPJ C14 H11 SING N N 41 WPJ C17 H12 SING N N 42 WPJ C18 H13 SING N N 43 WPJ C19 H14 SING N N 44 WPJ C21 H15 SING N N 45 WPJ C21 H16 SING N N 46 WPJ C22 H17 SING N N 47 WPJ C23 H18 SING N N 48 WPJ C29 H19 SING N N 49 WPJ N06 H20 SING N N 50 WPJ N06 H21 SING N N 51 WPJ N09 H22 SING N N 52 WPJ N09 H23 SING N N 53 WPJ O28 H24 SING N N 54 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WPJ SMILES ACDLabs 12.01 "CCc1nc(N)nc(c1OCCCOc2cccc(CC(C(F)F)C(O)=O)c2)N" WPJ InChI InChI 1.03 "InChI=1S/C19H24F2N4O4/c1-2-14-15(17(22)25-19(23)24-14)29-8-4-7-28-12-6-3-5-11(9-12)10-13(16(20)21)18(26)27/h3,5-6,9,13,16H,2,4,7-8,10H2,1H3,(H,26,27)(H4,22,23,24,25)/t13-/m0/s1" WPJ InChIKey InChI 1.03 QMHPAIITCHQDEY-ZDUSSCGKSA-N WPJ SMILES_CANONICAL CACTVS 3.385 "CCc1nc(N)nc(N)c1OCCCOc2cccc(C[C@@H](C(F)F)C(O)=O)c2" WPJ SMILES CACTVS 3.385 "CCc1nc(N)nc(N)c1OCCCOc2cccc(C[CH](C(F)F)C(O)=O)c2" WPJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCc1c(c(nc(n1)N)N)OCCCOc2cccc(c2)C[C@@H](C(F)F)C(=O)O" WPJ SMILES "OpenEye OEToolkits" 2.0.7 "CCc1c(c(nc(n1)N)N)OCCCOc2cccc(c2)CC(C(F)F)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WPJ "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2-[(3-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)methyl]-3,3-difluoropropanoic acid" WPJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2-[[3-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]oxypropoxy]phenyl]methyl]-3,3-bis(fluoranyl)propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WPJ "Create component" 2020-11-03 RCSB WPJ "Initial release" 2021-07-07 RCSB ##