data_WQF # _chem_comp.id WQF _chem_comp.name "(2S)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]but-3-enoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N2 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-12 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 332.246 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WQF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ERJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WQF C01 C1 C 0 1 N N N N N N -27.957 8.424 76.559 1.031 5.033 0.699 C01 WQF 1 WQF C02 C2 C 0 1 Y N N N N N -29.402 8.614 76.233 0.422 3.685 0.409 C02 WQF 2 WQF C04 C3 C 0 1 Y N N N N N -31.571 8.059 76.689 -1.437 2.325 0.397 C04 WQF 3 WQF C05 C4 C 0 1 Y N N N N N -32.106 8.916 75.679 -0.710 1.262 -0.104 C05 WQF 4 WQF C06 C5 C 0 1 N N N N N N -33.634 8.921 75.585 -1.379 -0.061 -0.372 C06 WQF 5 WQF C12 C6 C 0 1 Y N N N N N -31.184 9.672 74.917 0.645 1.425 -0.350 C12 WQF 6 WQF C13 C7 C 0 1 N N N N N N -31.441 10.678 73.732 1.474 0.288 -0.889 C13 WQF 7 WQF C25 C8 C 0 1 N N S N N N -32.042 13.096 73.214 2.843 -1.607 -0.260 C25 WQF 8 WQF C26 C9 C 0 1 N N N N N N -33.130 14.133 73.435 4.244 -1.125 -0.534 C26 WQF 9 WQF C27 C10 C 0 1 N N N N N N -33.670 14.794 72.419 4.711 -1.130 -1.758 C27 WQF 10 WQF C28 C11 C 0 1 N N N N N N -30.637 13.911 73.139 2.881 -2.694 0.783 C28 WQF 11 WQF C31 C12 C 0 1 Y N N N N N -29.824 9.480 75.233 1.219 2.664 -0.087 C31 WQF 12 WQF N03 N1 N 0 1 Y N N N N N -30.279 7.894 76.980 -0.862 3.487 0.635 N03 WQF 13 WQF N24 N2 N 0 1 N N N N N N -32.040 11.962 74.177 2.027 -0.488 0.229 N24 WQF 14 WQF O07 O1 O 0 1 N N N N N N -34.137 8.043 74.684 -2.764 0.028 -0.032 O07 WQF 15 WQF O09 O2 O 0 1 N N N N N N -35.442 9.824 73.442 -3.364 -2.388 0.813 O09 WQF 16 WQF O10 O3 O 0 1 N N N N N N -36.735 8.196 74.941 -5.280 -0.711 0.157 O10 WQF 17 WQF O11 O4 O 0 1 N N N N N N -35.673 7.359 72.758 -3.746 -1.702 -1.586 O11 WQF 18 WQF O29 O5 O 0 1 N N N N N N -29.757 13.636 73.998 3.572 -3.821 0.553 O29 WQF 19 WQF O30 O6 O 0 1 N N N N N N -30.516 14.764 72.228 2.289 -2.551 1.827 O30 WQF 20 WQF O32 O7 O 0 1 N N N N N N -28.922 10.184 74.508 2.543 2.871 -0.313 O32 WQF 21 WQF P08 P1 P 0 1 N N N N N N -35.676 8.379 73.865 -3.788 -1.204 -0.193 P08 WQF 22 WQF H1 H1 H 0 1 N N N N N N -27.858 7.702 77.383 1.393 5.055 1.727 H1 WQF 23 WQF H2 H2 H 0 1 N N N N N N -27.428 8.043 75.673 1.862 5.210 0.017 H2 WQF 24 WQF H3 H3 H 0 1 N N N N N N -27.520 9.387 76.861 0.277 5.809 0.563 H3 WQF 25 WQF H4 H4 H 0 1 N N N N N N -32.280 7.490 77.273 -2.492 2.202 0.595 H4 WQF 26 WQF H5 H5 H 0 1 N N N N N N -33.959 9.932 75.300 -1.280 -0.311 -1.429 H5 WQF 27 WQF H6 H6 H 0 1 N N N N N N -34.042 8.671 76.576 -0.906 -0.837 0.231 H6 WQF 28 WQF H7 H7 H 0 1 N N N N N N -32.124 10.204 73.012 0.848 -0.358 -1.505 H7 WQF 29 WQF H8 H8 H 0 1 N N N N N N -30.481 10.892 73.240 2.289 0.687 -1.493 H8 WQF 30 WQF H9 H9 H 0 1 N N N N N N -32.199 12.674 72.210 2.408 -2.000 -1.178 H9 WQF 31 WQF H10 H10 H 0 1 N N N N N N -33.471 14.336 74.439 4.864 -0.775 0.278 H10 WQF 32 WQF H11 H11 H 0 1 N N N N N N -34.442 15.527 72.601 5.715 -0.785 -1.955 H11 WQF 33 WQF H12 H12 H 0 1 N N N N N N -33.337 14.599 71.410 4.091 -1.480 -2.571 H12 WQF 34 WQF H13 H13 H 0 1 N N N N N N -31.537 12.260 74.988 1.294 -0.815 0.840 H13 WQF 35 WQF H15 H15 H 0 1 N N N N N N -35.324 9.864 72.500 -3.369 -2.133 1.745 H15 WQF 36 WQF H16 H16 H 0 1 N N N N N N -37.260 7.429 74.743 -5.951 -1.404 0.081 H16 WQF 37 WQF H17 H17 H 0 1 N N N N N N -28.989 14.174 73.849 3.568 -4.490 1.252 H17 WQF 38 WQF H18 H18 H 0 1 N N N N N N -28.044 9.976 74.806 2.745 3.191 -1.203 H18 WQF 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WQF O30 C28 DOUB N N 1 WQF C27 C26 DOUB N N 2 WQF O11 P08 DOUB N N 3 WQF C28 C25 SING N N 4 WQF C28 O29 SING N N 5 WQF C25 C26 SING N N 6 WQF C25 N24 SING N N 7 WQF O09 P08 SING N N 8 WQF C13 N24 SING N N 9 WQF C13 C12 SING N N 10 WQF P08 O07 SING N N 11 WQF P08 O10 SING N N 12 WQF O32 C31 SING N N 13 WQF O07 C06 SING N N 14 WQF C12 C31 DOUB Y N 15 WQF C12 C05 SING Y N 16 WQF C31 C02 SING Y N 17 WQF C06 C05 SING N N 18 WQF C05 C04 DOUB Y N 19 WQF C02 C01 SING N N 20 WQF C02 N03 DOUB Y N 21 WQF C04 N03 SING Y N 22 WQF C01 H1 SING N N 23 WQF C01 H2 SING N N 24 WQF C01 H3 SING N N 25 WQF C04 H4 SING N N 26 WQF C06 H5 SING N N 27 WQF C06 H6 SING N N 28 WQF C13 H7 SING N N 29 WQF C13 H8 SING N N 30 WQF C25 H9 SING N N 31 WQF C26 H10 SING N N 32 WQF C27 H11 SING N N 33 WQF C27 H12 SING N N 34 WQF N24 H13 SING N N 35 WQF O09 H15 SING N N 36 WQF O10 H16 SING N N 37 WQF O29 H17 SING N N 38 WQF O32 H18 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WQF SMILES ACDLabs 12.01 "Oc1c(CNC(C=C)C(=O)O)c(cnc1C)COP(=O)(O)O" WQF InChI InChI 1.06 "InChI=1S/C12H17N2O7P/c1-3-10(12(16)17)14-5-9-8(6-21-22(18,19)20)4-13-7(2)11(9)15/h3-4,10,14-15H,1,5-6H2,2H3,(H,16,17)(H2,18,19,20)/t10-/m0/s1" WQF InChIKey InChI 1.06 HVUNMKYNYWDWQK-JTQLQIEISA-N WQF SMILES_CANONICAL CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(CN[C@@H](C=C)C(O)=O)c1O" WQF SMILES CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(CN[CH](C=C)C(O)=O)c1O" WQF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)CN[C@@H](C=C)C(=O)O)O" WQF SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC(C=C)C(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WQF "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]but-3-enoic acid" WQF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]but-3-enoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WQF "Create component" 2022-10-12 RCSB WQF "Initial release" 2023-10-25 RCSB WQF "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id WQF _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C13 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #