data_WQZ # _chem_comp.id WQZ _chem_comp.name "(3P)-3-(5,6-dihydro-1,4-dioxin-2-yl)-5-{[(3-{[(2R,3R,4R,5S)-3,4,5-trihydroxy-2-(hydroxymethyl)piperidin-1-yl]methyl}phenyl)methyl]amino}benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H29 N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-14 _chem_comp.pdbx_modified_date 2023-02-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 467.514 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WQZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8EPO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WQZ N1 N1 N 0 1 N N N -36.148 -30.192 -69.061 4.271 -0.210 -0.168 N1 WQZ 1 WQZ N3 N2 N 0 1 N N N -45.312 -32.991 -70.356 -5.955 -3.787 -2.447 N3 WQZ 2 WQZ C4 C1 C 0 1 N N N -36.456 -31.622 -69.208 3.062 0.523 -0.567 C4 WQZ 3 WQZ C5 C2 C 0 1 N N R -34.840 -30.066 -68.392 5.462 0.325 -0.840 C5 WQZ 4 WQZ C6 C3 C 0 1 N N N -34.385 -28.602 -68.354 6.688 -0.494 -0.431 C6 WQZ 5 WQZ C7 C4 C 0 1 N N N -37.119 -29.515 -68.616 4.122 -1.648 -0.425 C7 WQZ 6 WQZ C8 C5 C 0 1 Y N N -37.619 -29.981 -67.184 2.989 -2.193 0.407 C8 WQZ 7 WQZ C10 C6 C 0 1 Y N N -38.919 -31.379 -65.584 0.664 -2.704 0.663 C10 WQZ 8 WQZ C13 C7 C 0 1 Y N N -42.253 -33.107 -68.244 -3.399 -2.211 -0.680 C13 WQZ 9 WQZ C15 C8 C 0 1 N N N -43.927 -33.313 -70.080 -5.407 -2.993 -1.848 C15 WQZ 10 WQZ C17 C9 C 0 1 Y N N -43.266 -30.609 -67.320 -4.678 0.175 -0.032 C17 WQZ 11 WQZ C20 C10 C 0 1 N N N -44.123 -26.607 -65.875 -6.736 3.600 1.254 C20 WQZ 12 WQZ C21 C11 C 0 1 N N N -45.077 -27.281 -66.891 -5.218 3.701 1.047 C21 WQZ 13 WQZ C22 C12 C 0 1 Y N N -42.156 -31.203 -66.681 -3.365 -0.054 0.382 C22 WQZ 14 WQZ C24 C13 C 0 1 Y N N -37.449 -29.759 -64.736 2.197 -3.174 2.442 C24 WQZ 15 WQZ C1 C14 C 0 1 N N R -33.745 -30.868 -69.132 5.666 1.786 -0.435 C1 WQZ 16 WQZ C11 C15 C 0 1 N N N -39.909 -32.500 -65.280 -0.738 -2.717 0.111 C11 WQZ 17 WQZ C12 C16 C 0 1 Y N N -41.653 -32.443 -67.152 -2.729 -1.242 0.052 C12 WQZ 18 WQZ C14 C17 C 0 1 Y N N -43.361 -32.533 -68.883 -4.715 -1.992 -1.092 C14 WQZ 19 WQZ C16 C18 C 0 1 Y N N -43.871 -31.274 -68.424 -5.355 -0.797 -0.767 C16 WQZ 20 WQZ C18 C19 C 0 1 N N N -43.806 -29.280 -66.716 -5.355 1.441 0.320 C18 WQZ 21 WQZ C19 C20 C 0 1 N N N -43.054 -28.792 -65.451 -6.607 1.641 -0.083 C19 WQZ 22 WQZ C2 C21 C 0 1 N N R -34.093 -32.261 -69.327 4.428 2.597 -0.828 C2 WQZ 23 WQZ C23 C22 C 0 1 Y N N -38.356 -30.781 -64.467 0.912 -3.192 1.933 C23 WQZ 24 WQZ C25 C23 C 0 1 Y N N -37.076 -29.370 -66.045 3.236 -2.675 1.679 C25 WQZ 25 WQZ C3 C24 C 0 1 N N S -35.343 -32.265 -70.060 3.194 1.991 -0.153 C3 WQZ 26 WQZ C9 C25 C 0 1 Y N N -38.570 -31.006 -66.912 1.704 -2.205 -0.100 C9 WQZ 27 WQZ N2 N3 N 0 1 N N N -40.498 -33.073 -66.487 -1.411 -1.463 0.458 N2 WQZ 28 WQZ O1 O1 O 0 1 N N N -32.417 -30.726 -68.614 6.813 2.312 -1.105 O1 WQZ 29 WQZ O2 O2 O 0 1 N N N -33.149 -32.963 -70.229 4.589 3.952 -0.402 O2 WQZ 30 WQZ O3 O3 O 0 1 N N N -35.636 -33.618 -70.353 2.027 2.708 -0.559 O3 WQZ 31 WQZ O4 O4 O 0 1 N N N -34.499 -28.046 -69.652 6.911 -0.349 0.973 O4 WQZ 32 WQZ O5 O5 O 0 1 N N N -43.373 -27.470 -65.023 -7.274 2.787 0.204 O5 WQZ 33 WQZ O6 O6 O 0 1 N N N -44.428 -28.327 -67.574 -4.681 2.372 1.049 O6 WQZ 34 WQZ H5 H5 H 0 1 N N N -37.428 -31.745 -69.709 2.939 0.461 -1.648 H5 WQZ 35 WQZ H6 H6 H 0 1 N N N -36.491 -32.100 -68.218 2.193 0.085 -0.076 H6 WQZ 36 WQZ H7 H7 H 0 1 N N N -34.915 -30.441 -67.361 5.328 0.263 -1.920 H7 WQZ 37 WQZ H8 H8 H 0 1 N N N -33.337 -28.551 -68.022 6.518 -1.545 -0.665 H8 WQZ 38 WQZ H9 H9 H 0 1 N N N -35.019 -28.037 -67.655 7.562 -0.137 -0.977 H9 WQZ 39 WQZ H10 H10 H 0 1 N N N -36.807 -28.462 -68.549 3.907 -1.809 -1.481 H10 WQZ 40 WQZ H11 H11 H 0 1 N N N -37.957 -29.604 -69.323 5.047 -2.162 -0.160 H11 WQZ 41 WQZ H12 H12 H 0 1 N N N -41.860 -34.053 -68.586 -2.901 -3.135 -0.936 H12 WQZ 42 WQZ H15 H15 H 0 1 N N N -43.406 -25.998 -66.446 -6.946 3.140 2.220 H15 WQZ 43 WQZ H16 H16 H 0 1 N N N -44.730 -25.952 -65.233 -7.181 4.594 1.215 H16 WQZ 44 WQZ H17 H17 H 0 1 N N N -45.415 -26.530 -67.620 -5.008 4.181 0.091 H17 WQZ 45 WQZ H18 H18 H 0 1 N N N -45.947 -27.687 -66.353 -4.774 4.280 1.856 H18 WQZ 46 WQZ H19 H19 H 0 1 N N N -41.692 -30.715 -65.837 -2.844 0.695 0.960 H19 WQZ 47 WQZ H20 H20 H 0 1 N N N -37.007 -29.235 -63.901 2.390 -3.555 3.434 H20 WQZ 48 WQZ H21 H21 H 0 1 N N N -33.718 -30.429 -70.140 5.814 1.847 0.643 H21 WQZ 49 WQZ H22 H22 H 0 1 N N N -40.717 -32.096 -64.652 -0.700 -2.821 -0.973 H22 WQZ 50 WQZ H23 H23 H 0 1 N N N -39.382 -33.296 -64.733 -1.288 -3.555 0.537 H23 WQZ 51 WQZ H24 H24 H 0 1 N N N -44.720 -30.827 -68.919 -6.373 -0.624 -1.084 H24 WQZ 52 WQZ H27 H27 H 0 1 N N N -42.338 -29.411 -64.930 -7.104 0.872 -0.655 H27 WQZ 53 WQZ H28 H28 H 0 1 N N N -34.187 -32.790 -68.367 4.302 2.568 -1.910 H28 WQZ 54 WQZ H29 H29 H 0 1 N N N -38.603 -31.086 -63.461 0.100 -3.583 2.529 H29 WQZ 55 WQZ H30 H30 H 0 1 N N N -36.351 -28.579 -66.170 4.240 -2.661 2.077 H30 WQZ 56 WQZ H31 H31 H 0 1 N N N -35.233 -31.687 -70.989 3.303 2.055 0.930 H31 WQZ 57 WQZ H32 H32 H 0 1 N N N -39.041 -31.516 -67.740 1.511 -1.824 -1.092 H32 WQZ 58 WQZ H33 H33 H 0 1 N N N -40.781 -34.002 -66.249 -0.941 -0.786 0.970 H33 WQZ 59 WQZ H34 H34 H 0 1 N N N -32.219 -29.804 -68.497 7.003 3.236 -0.895 H34 WQZ 60 WQZ H35 H35 H 0 1 N N N -32.292 -33.006 -69.820 3.841 4.524 -0.619 H35 WQZ 61 WQZ H36 H36 H 0 1 N N N -36.452 -33.668 -70.836 1.207 2.377 -0.169 H36 WQZ 62 WQZ H37 H37 H 0 1 N N N -34.218 -27.139 -69.634 7.675 -0.841 1.303 H37 WQZ 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WQZ N3 C15 TRIP N N 1 WQZ O3 C3 SING N N 2 WQZ O2 C2 SING N N 3 WQZ C15 C14 SING N N 4 WQZ C3 C2 SING N N 5 WQZ C3 C4 SING N N 6 WQZ O4 C6 SING N N 7 WQZ C2 C1 SING N N 8 WQZ C4 N1 SING N N 9 WQZ C1 O1 SING N N 10 WQZ C1 C5 SING N N 11 WQZ N1 C7 SING N N 12 WQZ N1 C5 SING N N 13 WQZ C14 C16 DOUB Y N 14 WQZ C14 C13 SING Y N 15 WQZ C7 C8 SING N N 16 WQZ C16 C17 SING Y N 17 WQZ C5 C6 SING N N 18 WQZ C13 C12 DOUB Y N 19 WQZ O6 C21 SING N N 20 WQZ O6 C18 SING N N 21 WQZ C17 C18 SING N N 22 WQZ C17 C22 DOUB Y N 23 WQZ C8 C9 DOUB Y N 24 WQZ C8 C25 SING Y N 25 WQZ C12 C22 SING Y N 26 WQZ C12 N2 SING N N 27 WQZ C9 C10 SING Y N 28 WQZ C21 C20 SING N N 29 WQZ C18 C19 DOUB N N 30 WQZ N2 C11 SING N N 31 WQZ C25 C24 DOUB Y N 32 WQZ C20 O5 SING N N 33 WQZ C10 C11 SING N N 34 WQZ C10 C23 DOUB Y N 35 WQZ C19 O5 SING N N 36 WQZ C24 C23 SING Y N 37 WQZ C4 H5 SING N N 38 WQZ C4 H6 SING N N 39 WQZ C5 H7 SING N N 40 WQZ C6 H8 SING N N 41 WQZ C6 H9 SING N N 42 WQZ C7 H10 SING N N 43 WQZ C7 H11 SING N N 44 WQZ C13 H12 SING N N 45 WQZ C20 H15 SING N N 46 WQZ C20 H16 SING N N 47 WQZ C21 H17 SING N N 48 WQZ C21 H18 SING N N 49 WQZ C22 H19 SING N N 50 WQZ C24 H20 SING N N 51 WQZ C1 H21 SING N N 52 WQZ C11 H22 SING N N 53 WQZ C11 H23 SING N N 54 WQZ C16 H24 SING N N 55 WQZ C19 H27 SING N N 56 WQZ C2 H28 SING N N 57 WQZ C23 H29 SING N N 58 WQZ C25 H30 SING N N 59 WQZ C3 H31 SING N N 60 WQZ C9 H32 SING N N 61 WQZ N2 H33 SING N N 62 WQZ O1 H34 SING N N 63 WQZ O2 H35 SING N N 64 WQZ O3 H36 SING N N 65 WQZ O4 H37 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WQZ SMILES ACDLabs 12.01 "OCC1C(O)C(O)C(O)CN1Cc1cccc(c1)CNc1cc(cc(C#N)c1)C1=COCCO1" WQZ InChI InChI 1.06 "InChI=1S/C25H29N3O6/c26-10-18-7-19(23-15-33-4-5-34-23)9-20(8-18)27-11-16-2-1-3-17(6-16)12-28-13-22(30)25(32)24(31)21(28)14-29/h1-3,6-9,15,21-22,24-25,27,29-32H,4-5,11-14H2/t21-,22+,24-,25-/m1/s1" WQZ InChIKey InChI 1.06 WVBGDIPNZUPYGG-PEISPCAHSA-N WQZ SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)CN1Cc2cccc(CNc3cc(cc(c3)C4=COCCO4)C#N)c2" WQZ SMILES CACTVS 3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)CN1Cc2cccc(CNc3cc(cc(c3)C4=COCCO4)C#N)c2" WQZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)CN2C[C@@H]([C@H]([C@@H]([C@H]2CO)O)O)O)CNc3cc(cc(c3)C4=COCCO4)C#N" WQZ SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)CN2CC(C(C(C2CO)O)O)O)CNc3cc(cc(c3)C4=COCCO4)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WQZ "SYSTEMATIC NAME" ACDLabs 12.01 "(3P)-3-(5,6-dihydro-1,4-dioxin-2-yl)-5-{[(3-{[(2R,3R,4R,5S)-3,4,5-trihydroxy-2-(hydroxymethyl)piperidin-1-yl]methyl}phenyl)methyl]amino}benzonitrile" WQZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-(2,3-dihydro-1,4-dioxin-5-yl)-5-[[3-[[(2~{R},3~{R},4~{R},5~{S})-2-(hydroxymethyl)-3,4,5-tris(oxidanyl)piperidin-1-yl]methyl]phenyl]methylamino]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WQZ "Create component" 2022-10-14 RCSB WQZ "Initial release" 2023-02-22 RCSB #