data_WTD # _chem_comp.id WTD _chem_comp.name "2-(2,6-difluorophenyl)-5-hydroxy-N-[2-(4-hydroxy-3-methoxyphenyl)ethyl]-6-oxo-3,6-dihydropyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H17 F2 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-10 _chem_comp.pdbx_modified_date 2021-11-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 417.363 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WTD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KNR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WTD C01 C1 C 0 1 N N N -34.893 3.448 12.786 -6.351 0.725 2.888 C01 WTD 1 WTD C03 C2 C 0 1 Y N N -32.824 4.130 11.848 -6.328 0.589 0.514 C03 WTD 2 WTD C04 C3 C 0 1 Y N N -31.644 3.511 12.246 -4.947 0.684 0.578 C04 WTD 3 WTD C05 C4 C 0 1 Y N N -30.632 3.275 11.323 -4.199 0.666 -0.585 C05 WTD 4 WTD C06 C5 C 0 1 N N N -29.336 2.593 11.758 -2.697 0.769 -0.514 C06 WTD 5 WTD C07 C6 C 0 1 N N N -28.888 3.058 13.141 -2.094 -0.633 -0.407 C07 WTD 6 WTD C09 C7 C 0 1 N N N -29.682 2.408 15.490 0.114 -1.649 -0.239 C09 WTD 7 WTD C11 C8 C 0 1 N N N -29.665 3.842 16.024 1.575 -1.545 -0.057 C11 WTD 8 WTD C12 C9 C 0 1 N N N -28.981 4.185 17.304 2.331 -2.665 0.152 C12 WTD 9 WTD C14 C10 C 0 1 N N N -28.969 5.586 17.816 3.785 -2.498 0.327 C14 WTD 10 WTD C17 C11 C 0 1 N N N -30.306 6.277 15.810 3.542 -0.213 0.072 C17 WTD 11 WTD C19 C12 C 0 1 Y N N -31.002 7.372 15.038 4.165 1.124 0.024 C19 WTD 12 WTD C20 C13 C 0 1 Y N N -30.242 8.260 14.303 4.310 1.875 1.196 C20 WTD 13 WTD C22 C14 C 0 1 Y N N -30.881 9.267 13.594 4.900 3.123 1.143 C22 WTD 14 WTD C23 C15 C 0 1 Y N N -32.266 9.364 13.639 5.346 3.631 -0.064 C23 WTD 15 WTD C24 C16 C 0 1 Y N N -33.016 8.462 14.386 5.207 2.895 -1.227 C24 WTD 16 WTD C25 C17 C 0 1 Y N N -32.380 7.455 15.095 4.619 1.645 -1.192 C25 WTD 17 WTD C27 C18 C 0 1 Y N N -30.798 3.658 10.001 -4.825 0.553 -1.812 C27 WTD 18 WTD C28 C19 C 0 1 Y N N -31.970 4.275 9.602 -6.203 0.458 -1.882 C28 WTD 19 WTD C29 C20 C 0 1 Y N N -32.981 4.513 10.522 -6.958 0.470 -0.721 C29 WTD 20 WTD F21 F1 F 0 1 N N N -28.878 8.123 14.292 3.875 1.381 2.376 F21 WTD 21 WTD F26 F2 F 0 1 N N N -33.081 6.545 15.844 4.489 0.926 -2.328 F26 WTD 22 WTD N08 N1 N 0 1 N N N -29.312 2.080 14.124 -0.634 -0.533 -0.338 N08 WTD 23 WTD N16 N2 N 0 1 N N N -29.629 6.627 17.073 4.307 -1.266 0.276 N16 WTD 24 WTD N18 N3 N 0 1 N N N -30.330 4.893 15.288 2.200 -0.317 -0.100 N18 WTD 25 WTD O02 O1 O 0 1 N N N -33.844 4.377 12.782 -7.065 0.606 1.657 O02 WTD 26 WTD O10 O2 O 0 1 N N N -30.015 1.524 16.201 -0.414 -2.742 -0.300 O10 WTD 27 WTD O13 O3 O 0 1 N N N -28.334 3.189 18.037 1.760 -3.894 0.197 O13 WTD 28 WTD O15 O4 O 0 1 N N N -28.424 5.863 18.828 4.502 -3.467 0.516 O15 WTD 29 WTD O30 O5 O 0 1 N N N -34.165 5.138 10.110 -8.313 0.376 -0.788 O30 WTD 30 WTD H1 H1 H 0 1 N N N -35.633 3.733 13.549 -5.667 -0.117 2.994 H1 WTD 31 WTD H2 H2 H 0 1 N N N -35.374 3.434 11.797 -5.784 1.656 2.891 H2 WTD 32 WTD H3 H3 H 0 1 N N N -34.496 2.448 13.015 -7.056 0.727 3.719 H3 WTD 33 WTD H4 H4 H 0 1 N N N -31.514 3.213 13.276 -4.455 0.772 1.535 H4 WTD 34 WTD H5 H5 H 0 1 N N N -29.497 1.505 11.783 -2.324 1.258 -1.414 H5 WTD 35 WTD H6 H6 H 0 1 N N N -28.547 2.830 11.029 -2.414 1.354 0.361 H6 WTD 36 WTD H7 H7 H 0 1 N N N -27.792 3.152 13.162 -2.468 -1.121 0.493 H7 WTD 37 WTD H8 H8 H 0 1 N N N -29.344 4.033 13.369 -2.377 -1.218 -1.282 H8 WTD 38 WTD H9 H9 H 0 1 N N N -30.305 9.971 13.011 5.014 3.704 2.046 H9 WTD 39 WTD H10 H10 H 0 1 N N N -32.765 10.148 13.088 5.806 4.608 -0.098 H10 WTD 40 WTD H11 H11 H 0 1 N N N -34.092 8.546 14.414 5.558 3.299 -2.165 H11 WTD 41 WTD H12 H12 H 0 1 N N N -30.012 3.475 9.283 -4.238 0.540 -2.718 H12 WTD 42 WTD H13 H13 H 0 1 N N N -32.098 4.572 8.572 -6.690 0.370 -2.842 H13 WTD 43 WTD H14 H14 H 0 1 N N N -29.352 1.121 13.844 -0.206 0.338 -0.363 H14 WTD 44 WTD H15 H15 H 0 1 N N N -30.803 4.686 14.432 1.673 0.483 -0.247 H15 WTD 45 WTD H16 H16 H 0 1 N N N -27.948 3.570 18.817 2.388 -4.614 0.349 H16 WTD 46 WTD H17 H17 H 0 1 N N N -34.751 5.227 10.852 -8.646 -0.531 -0.761 H17 WTD 47 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WTD C28 C27 DOUB Y N 1 WTD C28 C29 SING Y N 2 WTD C27 C05 SING Y N 3 WTD O30 C29 SING N N 4 WTD C29 C03 DOUB Y N 5 WTD C05 C06 SING N N 6 WTD C05 C04 DOUB Y N 7 WTD C06 C07 SING N N 8 WTD C03 C04 SING Y N 9 WTD C03 O02 SING N N 10 WTD O02 C01 SING N N 11 WTD C07 N08 SING N N 12 WTD C22 C23 DOUB Y N 13 WTD C22 C20 SING Y N 14 WTD C23 C24 SING Y N 15 WTD N08 C09 SING N N 16 WTD F21 C20 SING N N 17 WTD C20 C19 DOUB Y N 18 WTD C24 C25 DOUB Y N 19 WTD C19 C25 SING Y N 20 WTD C19 C17 SING N N 21 WTD C25 F26 SING N N 22 WTD N18 C17 SING N N 23 WTD N18 C11 SING N N 24 WTD C09 C11 SING N N 25 WTD C09 O10 DOUB N N 26 WTD C17 N16 DOUB N N 27 WTD C11 C12 DOUB N N 28 WTD N16 C14 SING N N 29 WTD C12 C14 SING N N 30 WTD C12 O13 SING N N 31 WTD C14 O15 DOUB N N 32 WTD C01 H1 SING N N 33 WTD C01 H2 SING N N 34 WTD C01 H3 SING N N 35 WTD C04 H4 SING N N 36 WTD C06 H5 SING N N 37 WTD C06 H6 SING N N 38 WTD C07 H7 SING N N 39 WTD C07 H8 SING N N 40 WTD C22 H9 SING N N 41 WTD C23 H10 SING N N 42 WTD C24 H11 SING N N 43 WTD C27 H12 SING N N 44 WTD C28 H13 SING N N 45 WTD N08 H14 SING N N 46 WTD N18 H15 SING N N 47 WTD O13 H16 SING N N 48 WTD O30 H17 SING N N 49 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WTD SMILES ACDLabs 12.01 "COc3cc(CCNC(C2=C(C(=O)N=C(c1c(cccc1F)F)N2)O)=O)ccc3O" WTD InChI InChI 1.03 "InChI=1S/C20H17F2N3O5/c1-30-14-9-10(5-6-13(14)26)7-8-23-19(28)16-17(27)20(29)25-18(24-16)15-11(21)3-2-4-12(15)22/h2-6,9,26-27H,7-8H2,1H3,(H,23,28)(H,24,25,29)" WTD InChIKey InChI 1.03 YORHGKVJYLNOPJ-UHFFFAOYSA-N WTD SMILES_CANONICAL CACTVS 3.385 "COc1cc(CCNC(=O)C2=C(O)C(=O)N=C(N2)c3c(F)cccc3F)ccc1O" WTD SMILES CACTVS 3.385 "COc1cc(CCNC(=O)C2=C(O)C(=O)N=C(N2)c3c(F)cccc3F)ccc1O" WTD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)CCNC(=O)C2=C(C(=O)N=C(N2)c3c(cccc3F)F)O" WTD SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)CCNC(=O)C2=C(C(=O)N=C(N2)c3c(cccc3F)F)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WTD "SYSTEMATIC NAME" ACDLabs 12.01 "2-(2,6-difluorophenyl)-5-hydroxy-N-[2-(4-hydroxy-3-methoxyphenyl)ethyl]-6-oxo-3,6-dihydropyrimidine-4-carboxamide" WTD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[2,6-bis(fluoranyl)phenyl]-~{N}-[2-(3-methoxy-4-oxidanyl-phenyl)ethyl]-5-oxidanyl-4-oxidanylidene-1~{H}-pyrimidine-6-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WTD "Create component" 2020-11-10 RCSB WTD "Initial release" 2021-11-10 RCSB ##