data_WTE # _chem_comp.id WTE _chem_comp.name "N-[(benzyloxy)carbonyl]-4-fluoro-L-phenylalanyl-N-[(2S,3Z)-1-[(2S)-oxolan-2-yl]-3-(2-oxooxolan-3-ylidene)propan-2-yl]-L-leucinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H42 F N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms GSK4365096A _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-12 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 623.712 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UHO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WTE C01 C01 C 0 1 N N N N N N -3.820 -2.135 2.348 2.679 -3.671 -1.782 C01 WTE 1 WTE C02 C02 C 0 1 N N N N N N -2.287 -2.049 2.277 2.962 -2.369 -2.533 C02 WTE 2 WTE C03 C03 C 0 1 N N N N N N -1.710 -2.041 3.695 3.105 -2.663 -4.028 C03 WTE 3 WTE C04 C04 C 0 1 N N N N N N -1.875 -0.745 1.542 1.805 -1.392 -2.314 C04 WTE 4 WTE C05 C05 C 0 1 N N S N N N -0.671 -1.026 0.644 1.760 -0.978 -0.842 C05 WTE 5 WTE N06 N06 N 0 1 N N N N N N -0.008 0.231 0.311 0.609 -0.100 -0.617 N06 WTE 6 WTE C07 C07 C 0 1 N N N N N N 0.922 0.875 1.298 -0.615 -0.630 -0.424 C07 WTE 7 WTE O08 O08 O 0 1 N N N N N N 1.003 0.448 2.402 -0.750 -1.832 -0.345 O08 WTE 8 WTE C09 C09 C 0 1 N N S N N N 1.724 2.129 0.896 -1.817 0.272 -0.307 C09 WTE 9 WTE C10 C10 C 0 1 N N N N N N 2.972 2.232 1.758 -1.632 1.217 0.882 C10 WTE 10 WTE C11 C11 C 0 1 Y N N N N N 4.243 2.320 0.835 -2.774 2.199 0.926 C11 WTE 11 WTE C12 C12 C 0 1 Y N N N N N 5.247 1.361 0.945 -2.679 3.400 0.247 C12 WTE 12 WTE C13 C13 C 0 1 Y N N N N N 6.452 1.525 0.248 -3.726 4.301 0.286 C13 WTE 13 WTE C14 C14 C 0 1 Y N N N N N 6.636 2.630 -0.568 -4.870 4.002 1.006 C14 WTE 14 WTE F15 F15 F 0 1 N N N N N N 7.802 2.771 -1.277 -5.894 4.882 1.045 F15 WTE 15 WTE C16 C16 C 0 1 Y N N N N N 5.635 3.595 -0.674 -4.964 2.799 1.686 C16 WTE 16 WTE C17 C17 C 0 1 Y N N N N N 4.430 3.430 0.014 -3.918 1.897 1.641 C17 WTE 17 WTE N18 N18 N 0 1 N N N N N N 0.899 3.318 1.089 -3.019 -0.540 -0.103 N18 WTE 18 WTE C19 C19 C 0 1 N N N N N N 0.810 3.953 2.432 -4.226 -0.059 -0.462 C19 WTE 19 WTE O20 O20 O 0 1 N N N N N N 1.205 3.378 3.384 -4.317 1.047 -0.956 O20 WTE 20 WTE O21 O21 O 0 1 N N N N N N 0.149 5.212 2.582 -5.331 -0.806 -0.275 O21 WTE 21 WTE C22 C22 C 0 1 N N N N N N 0.423 5.868 3.825 -6.596 -0.225 -0.686 C22 WTE 22 WTE C23 C23 C 0 1 Y N N N N N -0.556 7.084 4.001 -7.712 -1.197 -0.401 C23 WTE 23 WTE C24 C24 C 0 1 Y N N N N N -0.220 8.319 3.480 -8.084 -2.122 -1.359 C24 WTE 24 WTE C25 C25 C 0 1 Y N N N N N -1.012 9.438 3.764 -9.107 -3.014 -1.097 C25 WTE 25 WTE C26 C26 C 0 1 Y N N N N N -2.143 9.303 4.552 -9.757 -2.982 0.122 C26 WTE 26 WTE C27 C27 C 0 1 Y N N N N N -2.481 8.066 5.074 -9.385 -2.058 1.080 C27 WTE 27 WTE C28 C28 C 0 1 Y N N N N N -1.693 6.951 4.793 -8.359 -1.168 0.820 C28 WTE 28 WTE C29 C29 C 0 1 N N N N N N -1.146 -1.718 -0.652 3.028 -0.244 -0.487 C29 WTE 29 WTE O30 O30 O 0 1 N N N N N N -2.266 -1.578 -1.022 3.040 0.968 -0.463 O30 WTE 30 WTE N31 N31 N 0 1 N N N N N N -0.240 -2.640 -1.371 4.148 -0.936 -0.196 N31 WTE 31 WTE C32 C32 C 0 1 N N S N N N -0.758 -3.480 -2.449 5.345 -0.230 0.268 C32 WTE 32 WTE C33 C33 C 0 1 N N N N N N -1.017 -2.621 -3.684 6.235 -1.197 1.050 C33 WTE 33 WTE C34 C34 C 0 1 N N S N N N -1.540 -3.511 -4.828 5.511 -1.644 2.321 C34 WTE 34 WTE C35 C35 C 0 1 N N N N N N -0.972 -3.041 -6.116 6.445 -2.529 3.174 C35 WTE 35 WTE C36 C36 C 0 1 N N N N N N -2.085 -2.982 -7.061 5.475 -3.618 3.704 C36 WTE 36 WTE C37 C37 C 0 1 N N N N N N -3.319 -3.464 -6.305 4.507 -3.761 2.503 C37 WTE 37 WTE O38 O38 O 0 1 N N N N N N -2.968 -3.435 -4.875 4.365 -2.432 1.976 O38 WTE 38 WTE C39 C39 C 0 1 N N N N N N 0.268 -4.569 -2.787 6.104 0.305 -0.919 C39 WTE 39 WTE C40 C40 C 0 1 N N N N N N -0.069 -5.944 -2.136 6.394 1.601 -0.994 C40 WTE 40 WTE C41 C41 C 0 1 N N N N N N 0.907 -7.004 -1.731 7.023 2.324 -2.168 C41 WTE 41 WTE C42 C42 C 0 1 N N N N N N 0.088 -8.211 -1.317 7.122 3.785 -1.699 C42 WTE 42 WTE O43 O43 O 0 1 N N N N N N -1.274 -7.970 -1.775 6.576 3.825 -0.356 O43 WTE 43 WTE C44 C44 C 0 1 N N N N N N -1.434 -6.544 -1.966 6.162 2.615 0.043 C44 WTE 44 WTE O45 O45 O 0 1 N N N N N N -2.458 -5.953 -1.967 5.662 2.385 1.126 O45 WTE 45 WTE H051 H051 H 0 0 N N N N N N 0.026 -1.694 1.172 1.667 -1.866 -0.217 H051 WTE 46 WTE H091 H091 H 0 0 N N N N N N 2.019 2.041 -0.160 -1.924 0.856 -1.222 H091 WTE 47 WTE H321 H321 H 0 0 N N N N N N -1.699 -3.957 -2.137 5.051 0.597 0.914 H321 WTE 48 WTE H341 H341 H 0 0 N N N N N N -1.221 -4.547 -4.643 5.200 -0.771 2.895 H341 WTE 49 WTE H011 H011 H 0 0 N N N N N N -4.235 -2.141 1.329 1.707 -4.060 -2.083 H011 WTE 50 WTE H012 H012 H 0 0 N N N N N N -4.112 -3.060 2.868 3.452 -4.402 -2.019 H012 WTE 51 WTE H013 H013 H 0 0 N N N N N N -4.211 -1.266 2.898 2.677 -3.479 -0.709 H013 WTE 52 WTE H021 H021 H 0 0 N N N N N N -1.896 -2.916 1.725 3.886 -1.927 -2.160 H021 WTE 53 WTE H031 H031 H 0 0 N N N N N N -0.613 -1.979 3.645 2.181 -3.104 -4.401 H031 WTE 54 WTE H032 H032 H 0 0 N N N N N N -2.101 -1.172 4.245 3.306 -1.735 -4.563 H032 WTE 55 WTE H033 H033 H 0 0 N N N N N N -2.002 -2.966 4.215 3.929 -3.359 -4.184 H033 WTE 56 WTE H041 H041 H 0 0 N N N N N N -2.715 -0.389 0.928 1.953 -0.509 -2.935 H041 WTE 57 WTE H042 H042 H 0 0 N N N N N N -1.609 0.025 2.282 0.866 -1.874 -2.585 H042 WTE 58 WTE H061 H061 H 0 0 N N N N N N -0.173 0.664 -0.575 0.728 0.863 -0.606 H061 WTE 59 WTE H101 H101 H 0 0 N N N N N N 3.047 1.343 2.401 -1.614 0.639 1.806 H101 WTE 60 WTE H102 H102 H 0 0 N N N N N N 2.911 3.134 2.385 -0.692 1.758 0.774 H102 WTE 61 WTE H121 H121 H 0 0 N N N N N N 5.097 0.491 1.567 -1.786 3.633 -0.314 H121 WTE 62 WTE H131 H131 H 0 0 N N N N N N 7.237 0.790 0.347 -3.651 5.239 -0.244 H131 WTE 63 WTE H161 H161 H 0 0 N N N N N N 5.791 4.470 -1.288 -5.856 2.564 2.247 H161 WTE 64 WTE H171 H171 H 0 0 N N N N N N 3.644 4.163 -0.091 -3.993 0.957 2.167 H171 WTE 65 WTE H181 H181 H 0 0 N N N N N N 0.393 3.706 0.318 -2.947 -1.423 0.291 H181 WTE 66 WTE H221 H221 H 0 0 N N N N N N 0.280 5.159 4.654 -6.769 0.698 -0.132 H221 WTE 67 WTE H222 H222 H 0 0 N N N N N N 1.462 6.230 3.828 -6.567 -0.007 -1.753 H222 WTE 68 WTE H241 H241 H 0 0 N N N N N N 0.654 8.421 2.854 -7.575 -2.147 -2.311 H241 WTE 69 WTE H251 H251 H 0 0 N N N N N N -0.741 10.406 3.369 -9.398 -3.736 -1.846 H251 WTE 70 WTE H261 H261 H 0 0 N N N N N N -2.762 10.163 4.759 -10.557 -3.678 0.325 H261 WTE 71 WTE H271 H271 H 0 0 N N N N N N -3.356 7.965 5.699 -9.893 -2.033 2.032 H271 WTE 72 WTE H281 H281 H 0 0 N N N N N N -1.965 5.984 5.190 -8.065 -0.449 1.570 H281 WTE 73 WTE H311 H311 H 0 0 N N N N N N 0.727 -2.689 -1.120 4.161 -1.901 -0.295 H311 WTE 74 WTE H331 H331 H 0 0 N N N N N N -0.081 -2.135 -3.996 6.456 -2.068 0.432 H331 WTE 75 WTE H332 H332 H 0 0 N N N N N N -1.767 -1.852 -3.445 7.166 -0.697 1.319 H332 WTE 76 WTE H351 H351 H 0 0 N N N N N N -0.524 -2.044 -5.993 7.227 -2.973 2.558 H351 WTE 77 WTE H352 H352 H 0 0 N N N N N N -0.206 -3.745 -6.474 6.876 -1.958 3.997 H352 WTE 78 WTE H361 H361 H 0 0 N N N N N N -2.233 -1.950 -7.411 6.001 -4.553 3.898 H361 WTE 79 WTE H362 H362 H 0 0 N N N N N N -1.887 -3.636 -7.923 4.948 -3.275 4.595 H362 WTE 80 WTE H371 H371 H 0 0 N N N N N N -4.171 -2.796 -6.501 4.933 -4.423 1.750 H371 WTE 81 WTE H372 H372 H 0 0 N N N N N N -3.578 -4.488 -6.613 3.541 -4.140 2.838 H372 WTE 82 WTE H391 H391 H 0 0 N N N N N N 1.133 -4.400 -3.411 6.413 -0.364 -1.709 H391 WTE 83 WTE H411 H411 H 0 0 N N N N N N 1.561 -7.261 -2.577 8.014 1.922 -2.377 H411 WTE 84 WTE H412 H412 H 0 0 N N N N N N 1.520 -6.654 -0.887 6.386 2.248 -3.049 H412 WTE 85 WTE H421 H421 H 0 0 N N N N N N 0.490 -9.121 -1.786 8.164 4.104 -1.688 H421 WTE 86 WTE H422 H422 H 0 0 N N N N N N 0.106 -8.324 -0.223 6.540 4.429 -2.358 H422 WTE 87 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WTE C02 C01 SING N N 1 WTE C03 C02 SING N N 2 WTE C04 C02 SING N N 3 WTE C05 C04 SING N N 4 WTE C07 N06 SING N N 5 WTE O08 C07 DOUB N N 6 WTE C09 C07 SING N N 7 WTE C11 C10 SING N N 8 WTE C12 C11 DOUB Y N 9 WTE C13 C12 SING Y N 10 WTE C14 C13 DOUB Y N 11 WTE F15 C14 SING N N 12 WTE C16 C14 SING Y N 13 WTE C17 C16 DOUB Y N 14 WTE C10 C09 SING N N 15 WTE N18 C09 SING N N 16 WTE C19 N18 SING N N 17 WTE O20 C19 DOUB N N 18 WTE O21 C19 SING N N 19 WTE C22 O21 SING N N 20 WTE C23 C22 SING N N 21 WTE C24 C23 DOUB Y N 22 WTE C25 C24 SING Y N 23 WTE C26 C25 DOUB Y N 24 WTE C27 C26 SING Y N 25 WTE C28 C27 DOUB Y N 26 WTE N06 C05 SING N N 27 WTE C29 C05 SING N N 28 WTE O30 C29 DOUB N N 29 WTE N31 C29 SING N N 30 WTE C32 N31 SING N N 31 WTE C34 C33 SING N N 32 WTE C35 C34 SING N N 33 WTE C36 C35 SING N N 34 WTE C37 C36 SING N N 35 WTE O38 C37 SING N N 36 WTE C33 C32 SING N N 37 WTE C39 C32 SING N N 38 WTE C40 C39 DOUB N Z 39 WTE C41 C40 SING N N 40 WTE C42 C41 SING N N 41 WTE O43 C42 SING N N 42 WTE C44 O43 SING N N 43 WTE O45 C44 DOUB N N 44 WTE C11 C17 SING Y N 45 WTE C23 C28 SING Y N 46 WTE C34 O38 SING N N 47 WTE C40 C44 SING N N 48 WTE H051 C05 SING N N 49 WTE H091 C09 SING N N 50 WTE H321 C32 SING N N 51 WTE H341 C34 SING N N 52 WTE H011 C01 SING N N 53 WTE H012 C01 SING N N 54 WTE H013 C01 SING N N 55 WTE H021 C02 SING N N 56 WTE H031 C03 SING N N 57 WTE H032 C03 SING N N 58 WTE H033 C03 SING N N 59 WTE H041 C04 SING N N 60 WTE H042 C04 SING N N 61 WTE H061 N06 SING N N 62 WTE H101 C10 SING N N 63 WTE H102 C10 SING N N 64 WTE H121 C12 SING N N 65 WTE H131 C13 SING N N 66 WTE H161 C16 SING N N 67 WTE H171 C17 SING N N 68 WTE H181 N18 SING N N 69 WTE H221 C22 SING N N 70 WTE H222 C22 SING N N 71 WTE H241 C24 SING N N 72 WTE H251 C25 SING N N 73 WTE H261 C26 SING N N 74 WTE H271 C27 SING N N 75 WTE H281 C28 SING N N 76 WTE H311 N31 SING N N 77 WTE H331 C33 SING N N 78 WTE H332 C33 SING N N 79 WTE H351 C35 SING N N 80 WTE H352 C35 SING N N 81 WTE H361 C36 SING N N 82 WTE H362 C36 SING N N 83 WTE H371 C37 SING N N 84 WTE H372 C37 SING N N 85 WTE H391 C39 SING N N 86 WTE H411 C41 SING N N 87 WTE H412 C41 SING N N 88 WTE H421 C42 SING N N 89 WTE H422 C42 SING N N 90 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WTE SMILES ACDLabs 12.01 "Fc1ccc(cc1)CC(NC(=O)OCc1ccccc1)C(=O)NC(CC(C)C)C(=O)NC(CC1CCCO1)\C=C1\CCOC1=O" WTE InChI InChI 1.06 "InChI=1S/C34H42FN3O7/c1-22(2)17-29(31(39)36-27(20-28-9-6-15-43-28)19-25-14-16-44-33(25)41)37-32(40)30(18-23-10-12-26(35)13-11-23)38-34(42)45-21-24-7-4-3-5-8-24/h3-5,7-8,10-13,19,22,27-30H,6,9,14-18,20-21H2,1-2H3,(H,36,39)(H,37,40)(H,38,42)/b25-19-/t27-,28+,29+,30+/m1/s1" WTE InChIKey InChI 1.06 MSFOIQNYTTYSCY-JIXKKDCZSA-N WTE SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)[C@H](Cc1ccc(F)cc1)NC(=O)OCc2ccccc2)C(=O)N[C@@H](C[C@@H]3CCCO3)/C=C4/CCOC4=O" WTE SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)[CH](Cc1ccc(F)cc1)NC(=O)OCc2ccccc2)C(=O)N[CH](C[CH]3CCCO3)C=C4CCOC4=O" WTE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCCO1)/C=C\2/CCOC2=O)NC(=O)[C@H](Cc3ccc(cc3)F)NC(=O)OCc4ccccc4" WTE SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCCO1)C=C2CCOC2=O)NC(=O)C(Cc3ccc(cc3)F)NC(=O)OCc4ccccc4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WTE "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-4-fluoro-L-phenylalanyl-N-[(2S,3Z)-1-[(2S)-oxolan-2-yl]-3-(2-oxooxolan-3-ylidene)propan-2-yl]-L-leucinamide" WTE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-3-(4-fluorophenyl)-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(1~{Z},2~{S})-1-(2-oxidanylideneoxolan-3-ylidene)-3-[(2~{S})-oxolan-2-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-propan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WTE "Create component" 2023-10-12 RCSB WTE "Modify backbone" 2023-02-27 RCSB WTE "Initial release" 2024-03-13 RCSB WTE "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id WTE _pdbx_chem_comp_synonyms.name GSK4365096A _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id WTE _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C39 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #