data_WXL # _chem_comp.id WXL _chem_comp.name "[(~{Z})-4-[2-azanyl-7-[(5-chloranyl-1~{H}-indol-2-yl)methyl]-6-oxidanylidene-1~{H}-purin-9-yl]but-2-enyl]phosphonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 Cl N6 O4 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2023-05-22 _chem_comp.pdbx_modified_date 2023-06-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.808 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WXL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8SX4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WXL C4 C1 C 0 1 N N N 20.822 12.833 -11.508 2.754 -0.233 0.475 C4 WXL 1 WXL C5 C2 C 0 1 N N N 22.201 12.260 -11.599 3.923 -0.786 -0.299 C5 WXL 2 WXL C6 C3 C 0 1 N N N 23.351 12.934 -11.578 4.854 0.020 -0.744 C6 WXL 3 WXL N1 N1 N 0 1 N N N 15.964 10.797 -11.214 0.770 -4.985 1.880 N1 WXL 4 WXL C7 C4 C 0 1 N N N 23.510 14.420 -11.427 4.850 1.472 -0.340 C7 WXL 5 WXL C8 C5 C 0 1 Y N N 20.750 12.907 -9.018 0.799 -0.043 -1.006 C8 WXL 6 WXL N2 N2 N 0 1 N N N 18.087 11.639 -10.905 1.209 -2.908 0.959 N2 WXL 7 WXL O O1 O 0 1 N N N 17.132 11.705 -6.888 -2.103 -3.147 -1.200 O WXL 8 WXL C3 C6 C 0 1 Y N N 18.947 12.068 -9.964 0.910 -1.878 0.144 C3 WXL 9 WXL C2 C7 C 0 1 Y N N 18.740 12.107 -8.623 -0.252 -1.934 -0.632 C2 WXL 10 WXL N N3 N 0 1 N N N 16.636 11.254 -9.058 -0.719 -4.061 0.302 N WXL 11 WXL C1 C8 C 0 1 N N N 16.923 11.237 -10.397 0.426 -3.958 1.035 C1 WXL 12 WXL C C9 C 0 1 N N N 17.493 11.687 -8.063 -1.081 -3.065 -0.539 C WXL 13 WXL CL CL1 CL 0 0 N N N 22.812 6.833 -2.830 -7.658 1.656 1.620 CL WXL 14 WXL C14 C10 C 0 1 Y N N 22.666 8.271 -3.806 -6.168 1.729 0.733 C14 WXL 15 WXL C13 C11 C 0 1 Y N N 21.442 8.913 -3.875 -5.576 0.566 0.291 C13 WXL 16 WXL C15 C12 C 0 1 Y N N 23.786 8.751 -4.467 -5.582 2.960 0.467 C15 WXL 17 WXL C16 C13 C 0 1 Y N N 23.692 9.911 -5.224 -4.399 3.038 -0.236 C16 WXL 18 WXL C17 C14 C 0 1 Y N N 22.461 10.550 -5.321 -3.782 1.876 -0.687 C17 WXL 19 WXL C12 C15 C 0 1 Y N N 21.323 10.066 -4.650 -4.378 0.629 -0.423 C12 WXL 20 WXL C11 C16 C 0 1 Y N N 20.232 10.927 -5.016 -3.495 -0.376 -1.020 C11 WXL 21 WXL N5 N4 N 0 1 Y N N 22.074 11.645 -6.081 -2.627 1.632 -1.396 N5 WXL 22 WXL C10 C17 C 0 1 Y N N 20.738 11.895 -5.917 -2.471 0.286 -1.582 C10 WXL 23 WXL C9 C18 C 0 1 N N N 20.061 13.014 -6.637 -1.323 -0.359 -2.315 C9 WXL 24 WXL N4 N5 N 0 1 Y N N 19.888 12.626 -8.043 -0.291 -0.757 -1.353 N4 WXL 25 WXL N3 N6 N 1 1 Y N N 20.199 12.583 -10.194 1.503 -0.703 -0.126 N3 WXL 26 WXL P P1 P 0 1 N N N 24.828 14.888 -10.297 6.474 1.912 0.363 P WXL 27 WXL O3 O2 O 0 1 N N N 26.169 14.814 -10.958 7.539 1.572 -0.607 O3 WXL 28 WXL O2 O3 O 0 1 N N N 24.508 16.326 -9.821 6.514 3.491 0.673 O2 WXL 29 WXL O1 O4 O 0 1 N N N 24.703 13.962 -9.059 6.708 1.091 1.727 O1 WXL 30 WXL H1 H1 H 0 1 N N N 20.878 13.919 -11.672 2.810 -0.572 1.509 H1 WXL 31 WXL H2 H2 H 0 1 N N N 20.197 12.376 -12.289 2.783 0.857 0.448 H2 WXL 32 WXL H3 H3 H 0 1 N N N 22.272 11.186 -11.692 3.992 -1.847 -0.486 H3 WXL 33 WXL H4 H4 H 0 1 N N N 24.257 12.355 -11.679 5.625 -0.356 -1.401 H4 WXL 34 WXL H5 H5 H 0 1 N N N 16.121 10.770 -12.201 1.581 -4.927 2.409 H5 WXL 35 WXL H6 H6 H 0 1 N N N 15.088 10.494 -10.839 0.202 -5.768 1.947 H6 WXL 36 WXL H7 H7 H 0 1 N N N 23.730 14.849 -12.416 4.653 2.092 -1.215 H7 WXL 37 WXL H8 H8 H 0 1 N N N 22.564 14.835 -11.050 4.074 1.640 0.406 H8 WXL 38 WXL H9 H9 H 0 1 N N N 21.735 13.328 -8.882 1.054 0.930 -1.400 H9 WXL 39 WXL H10 H10 H 0 1 N N N 15.734 10.927 -8.777 -1.275 -4.851 0.382 H10 WXL 40 WXL H11 H11 H 0 1 N N N 20.590 8.526 -3.336 -6.036 -0.389 0.496 H11 WXL 41 WXL H12 H12 H 0 1 N N N 24.727 8.225 -4.393 -6.057 3.865 0.815 H12 WXL 42 WXL H13 H13 H 0 1 N N N 24.560 10.310 -5.729 -3.953 4.000 -0.437 H13 WXL 43 WXL H14 H14 H 0 1 N N N 19.213 10.850 -4.668 -3.641 -1.446 -1.011 H14 WXL 44 WXL H15 H15 H 0 1 N N N 22.686 12.177 -6.667 -2.013 2.313 -1.713 H15 WXL 45 WXL H16 H16 H 0 1 N N N 20.679 13.922 -6.576 -1.681 -1.240 -2.848 H16 WXL 46 WXL H17 H17 H 0 1 N N N 19.078 13.208 -6.182 -0.901 0.351 -3.026 H17 WXL 47 WXL H18 H18 H 0 1 N N N 25.232 16.901 -10.040 7.351 3.797 1.049 H18 WXL 48 WXL H19 H19 H 0 1 N N N 25.520 13.495 -8.929 6.045 1.265 2.410 H19 WXL 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WXL C5 C6 DOUB N Z 1 WXL C5 C4 SING N N 2 WXL C6 C7 SING N N 3 WXL C4 N3 SING N N 4 WXL C7 P SING N N 5 WXL N1 C1 SING N N 6 WXL O3 P DOUB N N 7 WXL N2 C1 DOUB N N 8 WXL N2 C3 SING N N 9 WXL C1 N SING N N 10 WXL P O2 SING N N 11 WXL P O1 SING N N 12 WXL N3 C3 SING Y N 13 WXL N3 C8 DOUB Y N 14 WXL C3 C2 DOUB Y N 15 WXL N C SING N N 16 WXL C8 N4 SING Y N 17 WXL C2 C SING N N 18 WXL C2 N4 SING Y N 19 WXL C O DOUB N N 20 WXL N4 C9 SING N N 21 WXL C9 C10 SING N N 22 WXL N5 C10 SING Y N 23 WXL N5 C17 SING Y N 24 WXL C10 C11 DOUB Y N 25 WXL C17 C16 DOUB Y N 26 WXL C17 C12 SING Y N 27 WXL C16 C15 SING Y N 28 WXL C11 C12 SING Y N 29 WXL C12 C13 DOUB Y N 30 WXL C15 C14 DOUB Y N 31 WXL C13 C14 SING Y N 32 WXL C14 CL SING N N 33 WXL C4 H1 SING N N 34 WXL C4 H2 SING N N 35 WXL C5 H3 SING N N 36 WXL C6 H4 SING N N 37 WXL N1 H5 SING N N 38 WXL N1 H6 SING N N 39 WXL C7 H7 SING N N 40 WXL C7 H8 SING N N 41 WXL C8 H9 SING N N 42 WXL N H10 SING N N 43 WXL C13 H11 SING N N 44 WXL C15 H12 SING N N 45 WXL C16 H13 SING N N 46 WXL C11 H14 SING N N 47 WXL N5 H15 SING N N 48 WXL C9 H16 SING N N 49 WXL C9 H17 SING N N 50 WXL O2 H18 SING N N 51 WXL O1 H19 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WXL SMILES ACDLabs 12.01 "O=P(O)(O)C\C=C/C[n+]1cn(Cc2cc3cc(Cl)ccc3[NH]2)c2C(=O)NC(N)=Nc21" WXL InChI InChI 1.06 "InChI=1S/C18H18ClN6O4P/c19-12-3-4-14-11(7-12)8-13(21-14)9-25-10-24(5-1-2-6-30(27,28)29)16-15(25)17(26)23-18(20)22-16/h1-4,7-8,10,21H,5-6,9H2,(H4-,20,22,23,26,27,28,29)/p+1/b2-1-" WXL InChIKey InChI 1.06 JSTMWLOUXSFOCX-UPHRSURJSA-O WXL SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2c(n(Cc3[nH]c4ccc(Cl)cc4c3)c[n+]2C\C=C/C[P](O)(O)=O)C(=O)N1" WXL SMILES CACTVS 3.385 "NC1=Nc2c(n(Cc3[nH]c4ccc(Cl)cc4c3)c[n+]2CC=CC[P](O)(O)=O)C(=O)N1" WXL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)cc([nH]2)Cn3c[n+](c4c3C(=O)NC(=N4)N)C/C=C\CP(=O)(O)O" WXL SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)cc([nH]2)Cn3c[n+](c4c3C(=O)NC(=N4)N)CC=CCP(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier WXL "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-7-[(5-chloro-1H-indol-2-yl)methyl]-6-oxo-9-[(2Z)-4-phosphonobut-2-en-1-yl]-6,7-dihydro-1H-purin-9-ium" WXL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(~{Z})-4-[2-azanyl-7-[(5-chloranyl-1~{H}-indol-2-yl)methyl]-6-oxidanylidene-1~{H}-purin-9-ium-9-yl]but-2-enyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WXL "Create component" 2023-05-22 RCSB WXL "Initial release" 2023-06-21 RCSB #