data_WY0 # _chem_comp.id WY0 _chem_comp.name "(5R)-5-ethyl-3-(6-spiro[2H-1-benzofuran-3,1'-cyclopropane]-4-yloxypyridin-3-yl)imidazolidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H19 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-17 _chem_comp.pdbx_modified_date 2024-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 365.383 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WY0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QUD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WY0 C4 C1 C 0 1 Y N N N N N 151.586 116.082 150.431 -4.594 -1.122 0.302 C4 WY0 1 WY0 N2 N1 N 0 1 N N N N N N 154.635 114.808 157.785 3.046 0.249 0.048 N2 WY0 2 WY0 C10 C2 C 0 1 N N N N N N 153.097 113.105 151.748 -3.853 2.260 1.280 C10 WY0 3 WY0 C2 C3 C 0 1 Y N N N N N 153.514 116.469 151.808 -3.050 0.000 -1.167 C2 WY0 4 WY0 C3 C4 C 0 1 Y N N N N N 152.722 115.613 151.056 -3.700 -0.087 0.050 C3 WY0 5 WY0 N3 N2 N 0 1 N N N N N N 155.325 114.671 159.901 5.223 0.656 0.311 N3 WY0 6 WY0 C5 C5 C 0 1 Y N N N N N 151.185 117.401 150.533 -4.814 -2.077 -0.688 C5 WY0 7 WY0 C9 C6 C 0 1 N N N N N N 154.146 113.435 150.733 -2.487 1.664 1.635 C9 WY0 8 WY0 C8 C7 C 0 1 N N N N N N 152.839 114.173 150.726 -3.655 0.754 1.299 C8 WY0 9 WY0 C7 C8 C 0 1 N N N N N N 151.818 113.951 149.634 -4.324 -0.144 2.351 C7 WY0 10 WY0 C6 C9 C 0 1 Y N N N N N 151.976 118.259 151.291 -4.162 -1.991 -1.900 C6 WY0 11 WY0 C1 C10 C 0 1 Y N N N N N 153.129 117.798 151.924 -3.281 -0.956 -2.148 C1 WY0 12 WY0 N1 N3 N 0 1 Y N N N N N 153.472 115.571 154.356 -0.483 -0.318 -0.586 N1 WY0 13 WY0 C11 C11 C 0 1 Y N N N N N 154.635 115.676 153.749 -0.887 0.852 -1.051 C11 WY0 14 WY0 C16 C12 C 0 1 N N N N N N 155.631 115.215 158.714 4.043 1.122 -0.137 C16 WY0 15 WY0 O1 O1 O 0 1 N N N N N N 150.935 115.104 149.731 -5.143 -1.012 1.544 O1 WY0 16 WY0 C17 C13 C 0 1 N N R N N N 154.107 113.878 159.869 4.966 -0.688 0.856 C17 WY0 17 WY0 C15 C14 C 0 1 Y N N N N N 153.490 115.287 155.669 0.770 -0.529 -0.230 C15 WY0 18 WY0 C14 C15 C 0 1 Y N N N N N 154.664 115.109 156.379 1.714 0.481 -0.333 C14 WY0 19 WY0 C13 C16 C 0 1 Y N N N N N 155.866 115.225 155.713 1.326 1.727 -0.819 C13 WY0 20 WY0 C12 C17 C 0 1 Y N N N N N 155.861 115.513 154.363 0.004 1.910 -1.182 C12 WY0 21 WY0 O2 O2 O 0 1 N N N N N N 154.657 115.957 152.416 -2.186 1.022 -1.404 O2 WY0 22 WY0 C18 C18 C 0 1 N N N N N N 153.652 114.077 158.428 3.478 -0.882 0.639 C18 WY0 23 WY0 C20 C19 C 0 1 N N N N N N 153.096 111.733 160.785 7.259 -1.532 0.337 C20 WY0 24 WY0 C19 C20 C 0 1 N N N N N N 154.327 112.406 160.203 5.764 -1.742 0.088 C19 WY0 25 WY0 O3 O3 O 0 1 N N N N N N 152.631 113.677 157.923 2.815 -1.852 0.937 O3 WY0 26 WY0 O4 O4 O 0 1 N N N N N N 156.577 115.932 158.449 3.899 2.213 -0.652 O4 WY0 27 WY0 H1 H1 H 0 1 N N N N N N 153.247 113.378 152.803 -4.436 2.702 2.088 H1 WY0 28 WY0 H2 H2 H 0 1 N N N N N N 152.558 112.148 151.691 -3.954 2.744 0.308 H2 WY0 29 WY0 H3 H3 H 0 1 N N N N N N 155.878 114.798 160.724 6.076 1.116 0.280 H3 WY0 30 WY0 H4 H4 H 0 1 N N N N N N 150.290 117.753 150.042 -5.501 -2.891 -0.505 H4 WY0 31 WY0 H5 H5 H 0 1 N N N N N N 154.378 112.720 149.930 -1.690 1.755 0.897 H5 WY0 32 WY0 H6 H6 H 0 1 N N N N N N 155.067 113.951 151.042 -2.171 1.715 2.677 H6 WY0 33 WY0 H7 H7 H 0 1 N N N N N N 151.261 113.018 149.804 -3.578 -0.717 2.902 H7 WY0 34 WY0 H8 H8 H 0 1 N N N N N N 152.304 113.913 148.648 -4.938 0.447 3.031 H8 WY0 35 WY0 H9 H9 H 0 1 N N N N N N 151.693 119.296 151.390 -4.341 -2.737 -2.660 H9 WY0 36 WY0 H10 H10 H 0 1 N N N N N N 153.728 118.480 152.509 -2.774 -0.890 -3.099 H10 WY0 37 WY0 H11 H11 H 0 1 N N N N N N 153.355 114.300 160.552 5.208 -0.723 1.918 H11 WY0 38 WY0 H12 H12 H 0 1 N N N N N N 152.549 115.194 156.192 1.062 -1.498 0.146 H12 WY0 39 WY0 H13 H13 H 0 1 N N N N N N 156.799 115.092 156.241 2.041 2.532 -0.910 H13 WY0 40 WY0 H14 H14 H 0 1 N N N N N N 156.782 115.607 153.807 -0.332 2.864 -1.562 H14 WY0 41 WY0 H15 H15 H 0 1 N N N N N N 153.322 110.679 161.002 7.828 -2.284 -0.210 H15 WY0 42 WY0 H16 H16 H 0 1 N N N N N N 152.804 112.244 161.714 7.548 -0.538 -0.004 H16 WY0 43 WY0 H17 H17 H 0 1 N N N N N N 152.270 111.789 160.060 7.466 -1.626 1.403 H17 WY0 44 WY0 H18 H18 H 0 1 N N N N N N 154.611 111.877 159.281 5.475 -2.737 0.428 H18 WY0 45 WY0 H19 H19 H 0 1 N N N N N N 155.145 112.332 160.935 5.557 -1.649 -0.978 H19 WY0 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WY0 C7 O1 SING N N 1 WY0 C7 C8 SING N N 2 WY0 O1 C4 SING N N 3 WY0 C4 C5 SING Y N 4 WY0 C4 C3 DOUB Y N 5 WY0 C5 C6 DOUB Y N 6 WY0 C8 C9 SING N N 7 WY0 C8 C3 SING N N 8 WY0 C8 C10 SING N N 9 WY0 C9 C10 SING N N 10 WY0 C3 C2 SING Y N 11 WY0 C6 C1 SING Y N 12 WY0 C2 C1 DOUB Y N 13 WY0 C2 O2 SING N N 14 WY0 O2 C11 SING N N 15 WY0 C11 N1 DOUB Y N 16 WY0 C11 C12 SING Y N 17 WY0 N1 C15 SING Y N 18 WY0 C12 C13 DOUB Y N 19 WY0 C15 C14 DOUB Y N 20 WY0 C13 C14 SING Y N 21 WY0 C14 N2 SING N N 22 WY0 N2 C18 SING N N 23 WY0 N2 C16 SING N N 24 WY0 O3 C18 DOUB N N 25 WY0 C18 C17 SING N N 26 WY0 O4 C16 DOUB N N 27 WY0 C16 N3 SING N N 28 WY0 C17 N3 SING N N 29 WY0 C17 C19 SING N N 30 WY0 C19 C20 SING N N 31 WY0 C10 H1 SING N N 32 WY0 C10 H2 SING N N 33 WY0 N3 H3 SING N N 34 WY0 C5 H4 SING N N 35 WY0 C9 H5 SING N N 36 WY0 C9 H6 SING N N 37 WY0 C7 H7 SING N N 38 WY0 C7 H8 SING N N 39 WY0 C6 H9 SING N N 40 WY0 C1 H10 SING N N 41 WY0 C17 H11 SING N N 42 WY0 C15 H12 SING N N 43 WY0 C13 H13 SING N N 44 WY0 C12 H14 SING N N 45 WY0 C20 H15 SING N N 46 WY0 C20 H16 SING N N 47 WY0 C20 H17 SING N N 48 WY0 C19 H18 SING N N 49 WY0 C19 H19 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WY0 InChI InChI 1.06 "InChI=1S/C20H19N3O4/c1-2-13-18(24)23(19(25)22-13)12-6-7-16(21-10-12)27-15-5-3-4-14-17(15)20(8-9-20)11-26-14/h3-7,10,13H,2,8-9,11H2,1H3,(H,22,25)/t13-/m1/s1" WY0 InChIKey InChI 1.06 XOWFIAMSTPQWIU-CYBMUJFWSA-N WY0 SMILES_CANONICAL CACTVS 3.385 "CC[C@H]1NC(=O)N(C1=O)c2ccc(Oc3cccc4OCC5(CC5)c34)nc2" WY0 SMILES CACTVS 3.385 "CC[CH]1NC(=O)N(C1=O)c2ccc(Oc3cccc4OCC5(CC5)c34)nc2" WY0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H]1C(=O)N(C(=O)N1)c2ccc(nc2)Oc3cccc4c3C5(CC5)CO4" WY0 SMILES "OpenEye OEToolkits" 2.0.7 "CCC1C(=O)N(C(=O)N1)c2ccc(nc2)Oc3cccc4c3C5(CC5)CO4" # _pdbx_chem_comp_identifier.comp_id WY0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{R})-5-ethyl-3-(6-spiro[2~{H}-1-benzofuran-3,1'-cyclopropane]-4-yloxypyridin-3-yl)imidazolidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WY0 "Create component" 2023-10-17 PDBE WY0 "Initial release" 2024-04-03 RCSB #