data_WY9 # _chem_comp.id WY9 _chem_comp.name "(5R)-5-ethyl-3-[6-(3-methoxy-4-methyl-phenoxy)pyridin-3-yl]imidazolidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-17 _chem_comp.pdbx_modified_date 2024-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 341.361 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WY9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QUC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WY9 C4 C1 C 0 1 N N N N N N 161.806 134.607 155.738 -4.048 -0.960 0.391 C4 WY9 1 WY9 C5 C2 C 0 1 Y N N N N N 161.287 134.008 153.332 -1.655 -0.697 0.119 C5 WY9 2 WY9 C8 C3 C 0 1 Y N N N N N 161.089 134.521 150.702 0.911 -1.590 -0.071 C8 WY9 3 WY9 N3 N1 N 0 1 Y N N N N N 160.009 134.090 151.310 0.630 -0.316 -0.288 N3 WY9 4 WY9 C2 C4 C 0 1 N N N N N N 162.722 131.564 156.879 -5.433 1.755 -0.997 C2 WY9 5 WY9 N1 N2 N 0 1 N N N N N N 162.045 133.888 156.835 -5.182 -0.238 0.439 N1 WY9 6 WY9 C6 C5 C 0 1 Y N N N N N 162.399 134.468 152.661 -1.398 -2.047 0.349 C6 WY9 7 WY9 C1 C6 C 0 1 N N N N N N 162.491 130.439 157.861 -6.937 1.924 -0.772 C1 WY9 8 WY9 C10 C7 C 0 1 Y N N N N N 158.919 135.634 148.643 3.747 -0.978 -1.643 C10 WY9 9 WY9 C11 C8 C 0 1 Y N N N N N 157.766 135.482 147.895 4.731 -0.035 -1.866 C11 WY9 10 WY9 C12 C9 C 0 1 Y N N N N N 157.546 134.349 147.123 5.141 0.795 -0.840 C12 WY9 11 WY9 C13 C10 C 0 1 N N N N N N 156.304 134.189 146.312 6.214 1.824 -1.086 C13 WY9 12 WY9 C14 C11 C 0 1 Y N N N N N 158.536 133.350 147.125 4.565 0.682 0.418 C14 WY9 13 WY9 C15 C12 C 0 1 N N N N N N 158.973 131.058 146.644 4.333 1.327 2.694 C15 WY9 14 WY9 C16 C13 C 0 1 Y N N N N N 159.691 133.494 147.867 3.577 -0.264 0.644 C16 WY9 15 WY9 C17 C14 C 0 1 Y N N N N N 160.107 133.829 152.625 -0.603 0.146 -0.203 C17 WY9 16 WY9 C18 C15 C 0 1 N N N N N N 160.993 132.522 155.333 -3.285 1.108 0.115 C18 WY9 17 WY9 C3 C16 C 0 1 N N R N N N 161.544 132.524 156.745 -4.792 1.171 0.264 C3 WY9 18 WY9 C7 C17 C 0 1 Y N N N N N 162.306 134.731 151.310 -0.093 -2.494 0.251 C7 WY9 19 WY9 C9 C18 C 0 1 Y N N N N N 159.861 134.634 148.622 3.163 -1.091 -0.388 C9 WY9 20 WY9 N2 N3 N 0 1 N N N N N N 161.350 133.722 154.737 -2.964 -0.198 0.206 N2 WY9 21 WY9 O1 O1 O 0 1 N N N N N N 161.947 135.799 155.611 -4.012 -2.170 0.508 O1 WY9 22 WY9 O2 O2 O 0 1 N N N N N N 161.037 134.788 149.368 2.195 -2.019 -0.170 O2 WY9 23 WY9 O3 O3 O 0 1 N N N N N N 158.275 132.261 146.354 4.969 1.498 1.426 O3 WY9 24 WY9 O4 O4 O 0 1 N N N N N N 160.354 131.644 154.812 -2.525 2.038 -0.053 O4 WY9 25 WY9 H1 H1 H 0 1 N N N N N N 162.924 131.124 155.891 -5.265 1.080 -1.836 H1 WY9 26 WY9 H2 H2 H 0 1 N N N N N N 163.600 132.138 157.211 -4.988 2.725 -1.215 H2 WY9 27 WY9 H3 H3 H 0 1 N N N N N N 162.520 134.249 157.638 -6.082 -0.579 0.564 H3 WY9 28 WY9 H4 H4 H 0 1 N N N N N N 163.331 134.621 153.186 -2.198 -2.728 0.598 H4 WY9 29 WY9 H5 H5 H 0 1 N N N N N N 163.382 129.796 157.899 -7.394 2.339 -1.670 H5 WY9 30 WY9 H6 H6 H 0 1 N N N N N N 162.299 130.858 158.860 -7.383 0.953 -0.553 H6 WY9 31 WY9 H7 H7 H 0 1 N N N N N N 161.623 129.844 157.540 -7.106 2.598 0.067 H7 WY9 32 WY9 H8 H8 H 0 1 N N N N N N 159.077 136.524 149.234 3.428 -1.626 -2.446 H8 WY9 33 WY9 H9 H9 H 0 1 N N N N N N 157.020 136.262 147.912 5.181 0.054 -2.843 H9 WY9 34 WY9 H10 H10 H 0 1 N N N N N N 155.532 133.691 146.917 7.191 1.387 -0.878 H10 WY9 35 WY9 H11 H11 H 0 1 N N N N N N 155.941 135.179 145.998 6.175 2.147 -2.127 H11 WY9 36 WY9 H12 H12 H 0 1 N N N N N N 156.523 133.580 145.423 6.053 2.681 -0.433 H12 WY9 37 WY9 H13 H13 H 0 1 N N N N N N 158.658 130.272 145.941 3.261 1.499 2.589 H13 WY9 38 WY9 H14 H14 H 0 1 N N N N N N 160.055 131.228 146.543 4.504 0.312 3.052 H14 WY9 39 WY9 H15 H15 H 0 1 N N N N N N 158.747 130.742 147.673 4.747 2.039 3.408 H15 WY9 40 WY9 H16 H16 H 0 1 N N N N N N 160.449 132.725 147.856 3.128 -0.353 1.622 H16 WY9 41 WY9 H17 H17 H 0 1 N N N N N N 159.235 133.467 153.150 -0.794 1.193 -0.387 H17 WY9 42 WY9 H18 H18 H 0 1 N N N N N N 160.761 132.310 157.488 -5.066 1.757 1.141 H18 WY9 43 WY9 H19 H19 H 0 1 N N N N N N 163.157 135.089 150.750 0.144 -3.533 0.428 H19 WY9 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WY9 C13 C12 SING N N 1 WY9 O3 C15 SING N N 2 WY9 O3 C14 SING N N 3 WY9 C12 C14 DOUB Y N 4 WY9 C12 C11 SING Y N 5 WY9 C14 C16 SING Y N 6 WY9 C16 C9 DOUB Y N 7 WY9 C11 C10 DOUB Y N 8 WY9 C9 C10 SING Y N 9 WY9 C9 O2 SING N N 10 WY9 O2 C8 SING N N 11 WY9 C8 N3 DOUB Y N 12 WY9 C8 C7 SING Y N 13 WY9 N3 C17 SING Y N 14 WY9 C7 C6 DOUB Y N 15 WY9 C17 C5 DOUB Y N 16 WY9 C6 C5 SING Y N 17 WY9 C5 N2 SING N N 18 WY9 N2 C18 SING N N 19 WY9 N2 C4 SING N N 20 WY9 O4 C18 DOUB N N 21 WY9 C18 C3 SING N N 22 WY9 O1 C4 DOUB N N 23 WY9 C4 N1 SING N N 24 WY9 C3 N1 SING N N 25 WY9 C3 C2 SING N N 26 WY9 C2 C1 SING N N 27 WY9 C2 H1 SING N N 28 WY9 C2 H2 SING N N 29 WY9 N1 H3 SING N N 30 WY9 C6 H4 SING N N 31 WY9 C1 H5 SING N N 32 WY9 C1 H6 SING N N 33 WY9 C1 H7 SING N N 34 WY9 C10 H8 SING N N 35 WY9 C11 H9 SING N N 36 WY9 C13 H10 SING N N 37 WY9 C13 H11 SING N N 38 WY9 C13 H12 SING N N 39 WY9 C15 H13 SING N N 40 WY9 C15 H14 SING N N 41 WY9 C15 H15 SING N N 42 WY9 C16 H16 SING N N 43 WY9 C17 H17 SING N N 44 WY9 C3 H18 SING N N 45 WY9 C7 H19 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WY9 InChI InChI 1.06 "InChI=1S/C18H19N3O4/c1-4-14-17(22)21(18(23)20-14)12-6-8-16(19-10-12)25-13-7-5-11(2)15(9-13)24-3/h5-10,14H,4H2,1-3H3,(H,20,23)/t14-/m1/s1" WY9 InChIKey InChI 1.06 AMAOXEGBJHLCSF-CQSZACIVSA-N WY9 SMILES_CANONICAL CACTVS 3.385 "CC[C@H]1NC(=O)N(C1=O)c2ccc(Oc3ccc(C)c(OC)c3)nc2" WY9 SMILES CACTVS 3.385 "CC[CH]1NC(=O)N(C1=O)c2ccc(Oc3ccc(C)c(OC)c3)nc2" WY9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H]1C(=O)N(C(=O)N1)c2ccc(nc2)Oc3ccc(c(c3)OC)C" WY9 SMILES "OpenEye OEToolkits" 2.0.7 "CCC1C(=O)N(C(=O)N1)c2ccc(nc2)Oc3ccc(c(c3)OC)C" # _pdbx_chem_comp_identifier.comp_id WY9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{R})-5-ethyl-3-[6-(3-methoxy-4-methyl-phenoxy)pyridin-3-yl]imidazolidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WY9 "Create component" 2023-10-17 PDBE WY9 "Initial release" 2024-04-03 RCSB #