data_WYU # _chem_comp.id WYU _chem_comp.name "(4S)-2-azanyl-4-methyl-4-[3-[2-[(2S)-2-methyl-1,4-diazepan-1-yl]pyrimidin-4-yl]-1,2,4-oxadiazol-5-yl]-6,7-dihydro-5H-1-benzothiophene-3-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H26 N8 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-17 _chem_comp.pdbx_modified_date 2023-12-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 450.560 _chem_comp.one_letter_code ? _chem_comp.three_letter_code WYU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QUG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal WYU C4 C1 C 0 1 N N S N N N 99.103 62.956 58.147 -3.286 -1.401 -0.631 C4 WYU 1 WYU C5 C2 C 0 1 Y N N N N N 101.305 63.756 57.248 -5.106 -0.393 0.790 C5 WYU 2 WYU C6 C3 C 0 1 Y N N N N N 100.547 62.720 57.686 -4.010 -0.243 0.038 C6 WYU 3 WYU C7 C4 C 0 1 Y N N N N N 101.246 61.481 57.600 -3.595 1.144 -0.065 C7 WYU 4 WYU C8 C5 C 0 1 Y N N N N N 102.547 61.619 57.128 -4.404 2.004 0.623 C8 WYU 5 WYU C10 C6 C 0 1 Y N N N N N 98.980 62.315 59.523 -1.798 -1.231 -0.463 C10 WYU 6 WYU N12 N1 N 0 1 Y N N N N N 99.309 61.906 61.669 0.165 -1.643 0.123 N12 WYU 7 WYU C13 C7 C 0 1 Y N N N N N 98.404 61.122 61.141 0.193 -0.506 -0.520 C13 WYU 8 WYU C20 C8 C 0 1 Y N N N N N 96.135 58.268 61.932 2.427 2.274 -1.709 C20 WYU 9 WYU C21 C9 C 0 1 Y N N N N N 96.857 59.170 61.177 1.281 1.529 -1.488 C21 WYU 10 WYU C22 C10 C 0 1 N N N N N N 100.723 60.211 57.996 -2.450 1.570 -0.812 C22 WYU 11 WYU C26 C11 C 0 1 N N S N N N 97.817 60.190 66.145 5.184 0.824 1.218 C26 WYU 12 WYU C1 C12 C 0 1 N N N N N N 100.888 65.197 57.203 -5.771 -1.726 1.076 C1 WYU 13 WYU C16 C13 C 0 1 Y N N N N N 97.651 60.073 61.873 1.393 0.329 -0.783 C16 WYU 14 WYU C18 C14 C 0 1 Y N N N N N 96.951 59.168 63.858 3.662 0.686 -0.584 C18 WYU 15 WYU C2 C15 C 0 1 N N N N N N 99.369 65.308 57.154 -5.262 -2.757 0.066 C2 WYU 16 WYU C25 C16 C 0 1 N N N N N N 98.160 62.204 57.183 -3.634 -1.435 -2.121 C25 WYU 17 WYU C27 C17 C 0 1 N N N N N N 98.394 59.513 67.437 6.395 0.159 1.897 C27 WYU 18 WYU C29 C18 C 0 1 N N N N N N 97.807 57.079 67.500 7.396 -1.447 0.430 C29 WYU 19 WYU C3 C19 C 0 1 N N N N N N 98.699 64.456 58.231 -3.731 -2.708 0.030 C3 WYU 20 WYU C30 C20 C 0 1 N N N N N N 96.742 56.908 66.431 6.425 -1.545 -0.658 C30 WYU 21 WYU C31 C21 C 0 1 N N N N N N 96.068 58.226 66.048 5.001 -1.180 -0.191 C31 WYU 22 WYU C32 C22 C 0 1 N N N N N N 97.118 61.501 66.467 3.955 0.638 2.110 C32 WYU 23 WYU N14 N2 N 0 1 Y N N N N N 98.171 61.366 59.811 -1.075 -0.231 -0.901 N14 WYU 24 WYU N15 N3 N 0 1 N N N N N N 103.464 60.661 56.914 -4.224 3.375 0.685 N15 WYU 25 WYU N17 N4 N 0 1 Y N N N N N 97.689 60.118 63.216 2.591 -0.056 -0.351 N17 WYU 26 WYU N19 N5 N 0 1 Y N N N N N 96.179 58.219 63.273 3.585 1.830 -1.250 N19 WYU 27 WYU N23 N6 N 0 1 N N N N N N 100.276 59.218 58.343 -1.541 1.907 -1.405 N23 WYU 28 WYU N24 N7 N 0 1 N N N N N N 96.958 59.170 65.355 4.893 0.257 -0.120 N24 WYU 29 WYU N28 N8 N 0 1 N N N N N N 98.837 58.110 67.174 7.484 -0.075 0.980 N28 WYU 30 WYU O11 O1 O 0 1 Y N N N N N 99.708 62.734 60.561 -0.969 -2.070 0.166 O11 WYU 31 WYU S9 S1 S 0 1 Y N N N N N 102.895 63.278 56.763 -5.664 1.158 1.395 S9 WYU 32 WYU H1 H1 H 0 1 N N N N N N 95.500 57.563 61.416 2.376 3.205 -2.254 H1 WYU 33 WYU H2 H2 H 0 1 N N N N N N 96.807 59.174 60.098 0.322 1.868 -1.851 H2 WYU 34 WYU H3 H3 H 0 1 N N N N N N 98.681 60.434 65.509 5.382 1.890 1.111 H3 WYU 35 WYU H4 H4 H 0 1 N N N N N N 101.315 65.670 56.307 -5.521 -2.049 2.087 H4 WYU 36 WYU H5 H5 H 0 1 N N N N N N 101.260 65.711 58.102 -6.852 -1.623 0.983 H5 WYU 37 WYU H6 H6 H 0 1 N N N N N N 99.085 66.360 57.305 -5.587 -3.753 0.366 H6 WYU 38 WYU H7 H7 H 0 1 N N N N N N 99.020 64.972 56.167 -5.657 -2.525 -0.923 H7 WYU 39 WYU H8 H8 H 0 1 N N N N N N 97.117 62.359 57.495 -4.711 -1.553 -2.240 H8 WYU 40 WYU H9 H9 H 0 1 N N N N N N 98.298 62.588 56.161 -3.316 -0.504 -2.589 H9 WYU 41 WYU H10 H10 H 0 1 N N N N N N 98.393 61.129 57.206 -3.122 -2.273 -2.594 H10 WYU 42 WYU H11 H11 H 0 1 N N N N N N 99.255 60.098 67.792 6.745 0.803 2.703 H11 WYU 43 WYU H12 H12 H 0 1 N N N N N N 97.614 59.501 68.212 6.082 -0.795 2.320 H12 WYU 44 WYU H13 H13 H 0 1 N N N N N N 97.312 57.370 68.438 7.104 -2.130 1.227 H13 WYU 45 WYU H14 H14 H 0 1 N N N N N N 98.316 56.114 67.638 8.377 -1.741 0.054 H14 WYU 46 WYU H15 H15 H 0 1 N N N N N N 98.990 64.844 59.218 -3.353 -3.554 -0.544 H15 WYU 47 WYU H16 H16 H 0 1 N N N N N N 97.608 64.534 58.113 -3.341 -2.753 1.047 H16 WYU 48 WYU H17 H17 H 0 1 N N N N N N 95.974 56.217 66.808 6.720 -0.868 -1.459 H17 WYU 49 WYU H18 H18 H 0 1 N N N N N N 97.211 56.480 65.533 6.421 -2.566 -1.039 H18 WYU 50 WYU H19 H19 H 0 1 N N N N N N 95.700 58.707 66.966 4.272 -1.566 -0.904 H19 WYU 51 WYU H20 H20 H 0 1 N N N N N N 95.218 58.001 65.386 4.815 -1.612 0.792 H20 WYU 52 WYU H21 H21 H 0 1 N N N N N N 97.804 62.155 67.025 4.176 1.001 3.114 H21 WYU 53 WYU H22 H22 H 0 1 N N N N N N 96.819 61.996 65.531 3.117 1.201 1.697 H22 WYU 54 WYU H23 H23 H 0 1 N N N N N N 96.225 61.300 67.077 3.695 -0.419 2.156 H23 WYU 55 WYU H24 H24 H 0 1 N N N N N N 104.295 61.072 56.540 -3.481 3.788 0.218 H24 WYU 56 WYU H25 H25 H 0 1 N N N N N N 103.677 60.205 57.778 -4.842 3.923 1.195 H25 WYU 57 WYU H26 H26 H 0 1 N N N N N N 99.067 58.029 66.204 7.487 0.611 0.240 H26 WYU 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal WYU S9 C8 SING Y N 1 WYU S9 C5 SING Y N 2 WYU N15 C8 SING N N 3 WYU C8 C7 DOUB Y N 4 WYU C2 C1 SING N N 5 WYU C2 C3 SING N N 6 WYU C25 C4 SING N N 7 WYU C1 C5 SING N N 8 WYU C5 C6 DOUB Y N 9 WYU C7 C6 SING Y N 10 WYU C7 C22 SING N N 11 WYU C6 C4 SING N N 12 WYU C22 N23 TRIP N N 13 WYU C4 C3 SING N N 14 WYU C4 C10 SING N N 15 WYU C10 N14 DOUB Y N 16 WYU C10 O11 SING Y N 17 WYU N14 C13 SING Y N 18 WYU O11 N12 SING Y N 19 WYU C13 N12 DOUB Y N 20 WYU C13 C16 SING N N 21 WYU C21 C16 DOUB Y N 22 WYU C21 C20 SING Y N 23 WYU C16 N17 SING Y N 24 WYU C20 N19 DOUB Y N 25 WYU N17 C18 DOUB Y N 26 WYU N19 C18 SING Y N 27 WYU C18 N24 SING N N 28 WYU N24 C31 SING N N 29 WYU N24 C26 SING N N 30 WYU C31 C30 SING N N 31 WYU C26 C32 SING N N 32 WYU C26 C27 SING N N 33 WYU C30 C29 SING N N 34 WYU N28 C27 SING N N 35 WYU N28 C29 SING N N 36 WYU C20 H1 SING N N 37 WYU C21 H2 SING N N 38 WYU C26 H3 SING N N 39 WYU C1 H4 SING N N 40 WYU C1 H5 SING N N 41 WYU C2 H6 SING N N 42 WYU C2 H7 SING N N 43 WYU C25 H8 SING N N 44 WYU C25 H9 SING N N 45 WYU C25 H10 SING N N 46 WYU C27 H11 SING N N 47 WYU C27 H12 SING N N 48 WYU C29 H13 SING N N 49 WYU C29 H14 SING N N 50 WYU C3 H15 SING N N 51 WYU C3 H16 SING N N 52 WYU C30 H17 SING N N 53 WYU C30 H18 SING N N 54 WYU C31 H19 SING N N 55 WYU C31 H20 SING N N 56 WYU C32 H21 SING N N 57 WYU C32 H22 SING N N 58 WYU C32 H23 SING N N 59 WYU N15 H24 SING N N 60 WYU N15 H25 SING N N 61 WYU N28 H26 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor WYU InChI InChI 1.06 "InChI=1S/C22H26N8OS/c1-13-12-25-8-4-10-30(13)21-26-9-6-15(27-21)19-28-20(31-29-19)22(2)7-3-5-16-17(22)14(11-23)18(24)32-16/h6,9,13,25H,3-5,7-8,10,12,24H2,1-2H3/t13-,22-/m0/s1" WYU InChIKey InChI 1.06 ITTALXOYNGAVCQ-XMHCIUCPSA-N WYU SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CNCCCN1c2nccc(n2)c3noc(n3)[C@@]4(C)CCCc5sc(N)c(C#N)c45" WYU SMILES CACTVS 3.385 "C[CH]1CNCCCN1c2nccc(n2)c3noc(n3)[C]4(C)CCCc5sc(N)c(C#N)c45" WYU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CNCCCN1c2nccc(n2)c3nc(on3)[C@]4(CCCc5c4c(c(s5)N)C#N)C" WYU SMILES "OpenEye OEToolkits" 2.0.7 "CC1CNCCCN1c2nccc(n2)c3nc(on3)C4(CCCc5c4c(c(s5)N)C#N)C" # _pdbx_chem_comp_identifier.comp_id WYU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{S})-2-azanyl-4-methyl-4-[3-[2-[(2~{S})-2-methyl-1,4-diazepan-1-yl]pyrimidin-4-yl]-1,2,4-oxadiazol-5-yl]-6,7-dihydro-5~{H}-1-benzothiophene-3-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site WYU "Create component" 2023-10-17 PDBE WYU "Initial release" 2023-12-06 RCSB #