data_X1L # _chem_comp.id X1L _chem_comp.name "N-[(1S)-1-cyclopropyl-3-(methanesulfonyl)propyl]-2-(1,1-difluoroethyl)-4-phenoxypyrimidine-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H23 F2 N3 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-19 _chem_comp.pdbx_modified_date 2024-04-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.476 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X1L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GQU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X1L N1 N1 N 0 1 N N N N N N 19.751 21.333 14.623 -1.810 -0.412 0.776 N1 X1L 1 X1L C7 C1 C 0 1 N N N N N N 21.052 23.380 14.211 -4.240 -0.605 0.581 C7 X1L 2 X1L C8 C2 C 0 1 N N N N N N 21.423 23.515 15.649 -4.265 0.106 -0.774 C8 X1L 3 X1L N2 N2 N 0 1 Y N N N N N 16.427 19.692 16.859 2.822 0.670 0.135 N2 X1L 4 X1L C9 C3 C 0 1 N N N N N N 23.500 22.487 17.202 -5.640 1.757 -2.597 C9 X1L 5 X1L O1 O1 O 0 1 N N N N N N 23.635 24.838 16.090 -6.891 0.066 -1.007 O1 X1L 6 X1L C1 C4 C 0 1 N N N N N N 15.578 17.866 18.203 3.722 2.888 0.579 C1 X1L 7 X1L C5 C5 C 0 1 N N N N N N 19.826 20.092 15.127 -0.573 -0.803 0.412 C5 X1L 8 X1L C6 C6 C 0 1 N N S N N N 20.827 21.910 13.832 -2.922 -1.365 0.734 C6 X1L 9 X1L C4 C7 C 0 1 Y N N N N N 18.654 19.587 15.915 0.547 0.157 0.455 C4 X1L 10 X1L C3 C8 C 0 1 Y N N N N N 18.786 18.347 16.547 0.347 1.477 0.870 C3 X1L 11 X1L O3 O2 O 0 1 N N N N N N 17.231 21.392 15.508 2.099 -1.494 -0.332 O3 X1L 12 X1L C2 C9 C 0 1 Y N N N N N 16.714 18.515 17.395 2.583 1.903 0.534 C2 X1L 13 X1L N N3 N 0 1 Y N N N N N 17.825 17.798 17.294 1.379 2.303 0.894 N X1L 14 X1L C C10 C 0 1 N N N N N N 14.735 18.858 18.919 3.206 4.242 1.069 C X1L 15 X1L O O3 O 0 1 N N N N N N 20.813 19.385 14.960 -0.379 -1.947 0.048 O X1L 16 X1L C10 C11 C 0 1 N N N N N N 20.500 21.870 12.332 -2.948 -2.176 2.031 C10 X1L 17 X1L C11 C12 C 0 1 N N N N N N 20.869 20.619 11.599 -1.712 -3.012 2.367 C11 X1L 18 X1L C12 C13 C 0 1 N N N N N N 21.642 21.874 11.364 -3.000 -3.700 1.911 C12 X1L 19 X1L C13 C14 C 0 1 Y N N N N N 17.409 20.198 16.127 1.847 -0.229 0.079 C13 X1L 20 X1L C14 C15 C 0 1 Y N N N N N 15.940 21.887 15.290 3.350 -1.783 -0.777 C14 X1L 21 X1L C15 C16 C 0 1 Y N N N N N 15.683 23.205 15.631 4.386 -1.961 0.128 C15 X1L 22 X1L C16 C17 C 0 1 Y N N N N N 14.434 23.746 15.371 5.657 -2.256 -0.327 C16 X1L 23 X1L C17 C18 C 0 1 Y N N N N N 13.450 22.979 14.780 5.897 -2.371 -1.684 C17 X1L 24 X1L C18 C19 C 0 1 Y N N N N N 13.708 21.662 14.455 4.866 -2.194 -2.588 C18 X1L 25 X1L C19 C20 C 0 1 Y N N N N N 14.951 21.105 14.705 3.592 -1.905 -2.138 C19 X1L 26 X1L F F1 F 0 1 N N N N N N 16.080 16.971 19.067 4.708 2.420 1.455 F X1L 27 X1L F1 F2 F 0 1 N N N N N N 14.813 17.098 17.393 4.266 3.031 -0.701 F1 X1L 28 X1L O2 O4 O 0 1 N N N N N N 23.744 22.856 14.637 -5.867 2.046 0.014 O2 X1L 29 X1L S1 S1 S 0 1 N N N N N N 23.194 23.498 15.803 -5.828 1.008 -0.956 S1 X1L 30 X1L H5 H1 H 0 1 N N N N N N 18.931 21.878 14.796 -1.964 0.499 1.071 H5 X1L 31 X1L H6 H2 H 0 1 N N N N N N 21.863 23.790 13.591 -4.330 0.132 1.379 H6 X1L 32 X1L H7 H3 H 0 1 N N N N N N 20.126 23.944 14.025 -5.073 -1.306 0.638 H7 X1L 33 X1L H8 H4 H 0 1 N N N N N N 21.029 24.464 16.043 -3.432 0.807 -0.831 H8 X1L 34 X1L H9 H5 H 0 1 N N N N N N 20.997 22.676 16.219 -4.175 -0.630 -1.572 H9 X1L 35 X1L H11 H6 H 0 1 N N N N N N 24.584 22.418 17.375 -5.510 0.972 -3.342 H11 X1L 36 X1L H12 H7 H 0 1 N N N N N N 23.015 22.927 18.086 -6.530 2.340 -2.835 H12 X1L 37 X1L H10 H8 H 0 1 N N N N N N 23.093 21.481 17.023 -4.767 2.410 -2.601 H10 X1L 38 X1L H H9 H 0 1 N N N N N N 21.759 21.353 14.006 -2.791 -2.039 -0.113 H X1L 39 X1L H4 H10 H 0 1 N N N N N N 19.712 17.806 16.425 -0.634 1.816 1.167 H4 X1L 40 X1L H1 H11 H 0 1 N N N N N N 14.331 19.584 18.199 2.782 4.131 2.067 H1 X1L 41 X1L H2 H12 H 0 1 N N N N N N 13.905 18.339 19.421 4.030 4.955 1.102 H2 X1L 42 X1L H3 H13 H 0 1 N N N N N N 15.345 19.385 19.668 2.438 4.607 0.387 H3 X1L 43 X1L H13 H14 H 0 1 N N N N N N 19.577 22.380 12.020 -3.487 -1.718 2.861 H13 X1L 44 X1L H14 H15 H 0 1 N N N N N N 21.333 19.781 12.140 -0.879 -2.984 1.664 H14 X1L 45 X1L H15 H16 H 0 1 N N N N N N 20.206 20.226 10.814 -1.437 -3.104 3.418 H15 X1L 46 X1L H16 H17 H 0 1 N N N N N N 22.675 21.961 11.732 -3.572 -4.246 2.661 H16 X1L 47 X1L H17 H18 H 0 1 N N N N N N 21.549 22.406 10.406 -3.014 -4.126 0.907 H17 X1L 48 X1L H18 H19 H 0 1 N N N N N N 16.450 23.806 16.096 4.200 -1.870 1.188 H18 X1L 49 X1L H19 H20 H 0 1 N N N N N N 14.229 24.774 15.632 6.464 -2.395 0.377 H19 X1L 50 X1L H20 H21 H 0 1 N N N N N N 12.481 23.408 14.572 6.891 -2.601 -2.038 H20 X1L 51 X1L H21 H22 H 0 1 N N N N N N 12.934 21.061 14.002 5.056 -2.284 -3.648 H21 X1L 52 X1L H22 H23 H 0 1 N N N N N N 15.150 20.075 14.448 2.788 -1.766 -2.845 H22 X1L 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X1L C C1 SING N N 1 X1L F C1 SING N N 2 X1L F1 C1 SING N N 3 X1L C1 C2 SING N N 4 X1L C2 N DOUB Y N 5 X1L N C3 SING Y N 6 X1L C3 C4 DOUB Y N 7 X1L C4 C5 SING N N 8 X1L O C5 DOUB N N 9 X1L C5 N1 SING N N 10 X1L N1 C6 SING N N 11 X1L C6 C7 SING N N 12 X1L C7 C8 SING N N 13 X1L C8 S1 SING N N 14 X1L O1 S1 DOUB N N 15 X1L S1 O2 DOUB N N 16 X1L C9 S1 SING N N 17 X1L C10 C6 SING N N 18 X1L C10 C11 SING N N 19 X1L C11 C12 SING N N 20 X1L C12 C10 SING N N 21 X1L C13 C4 SING Y N 22 X1L O3 C13 SING N N 23 X1L C14 O3 SING N N 24 X1L C14 C15 DOUB Y N 25 X1L C15 C16 SING Y N 26 X1L C16 C17 DOUB Y N 27 X1L C17 C18 SING Y N 28 X1L C18 C19 DOUB Y N 29 X1L C19 C14 SING Y N 30 X1L N2 C13 DOUB Y N 31 X1L C2 N2 SING Y N 32 X1L N1 H5 SING N N 33 X1L C7 H6 SING N N 34 X1L C7 H7 SING N N 35 X1L C8 H8 SING N N 36 X1L C8 H9 SING N N 37 X1L C9 H11 SING N N 38 X1L C9 H12 SING N N 39 X1L C9 H10 SING N N 40 X1L C6 H SING N N 41 X1L C3 H4 SING N N 42 X1L C H1 SING N N 43 X1L C H2 SING N N 44 X1L C H3 SING N N 45 X1L C10 H13 SING N N 46 X1L C11 H14 SING N N 47 X1L C11 H15 SING N N 48 X1L C12 H16 SING N N 49 X1L C12 H17 SING N N 50 X1L C15 H18 SING N N 51 X1L C16 H19 SING N N 52 X1L C17 H20 SING N N 53 X1L C18 H21 SING N N 54 X1L C19 H22 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X1L SMILES ACDLabs 12.01 "FC(C)(F)c1nc(Oc2ccccc2)c(cn1)C(=O)NC(CCS(C)(=O)=O)C1CC1" X1L InChI InChI 1.06 "InChI=1S/C20H23F2N3O4S/c1-20(21,22)19-23-12-15(18(25-19)29-14-6-4-3-5-7-14)17(26)24-16(13-8-9-13)10-11-30(2,27)28/h3-7,12-13,16H,8-11H2,1-2H3,(H,24,26)" X1L InChIKey InChI 1.06 DBNMEVJJGIPVCE-UHFFFAOYSA-N X1L SMILES_CANONICAL CACTVS 3.385 "CC(F)(F)c1ncc(C(=O)N[C@@H](CC[S](C)(=O)=O)C2CC2)c(Oc3ccccc3)n1" X1L SMILES CACTVS 3.385 "CC(F)(F)c1ncc(C(=O)N[CH](CC[S](C)(=O)=O)C2CC2)c(Oc3ccccc3)n1" X1L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(c1ncc(c(n1)Oc2ccccc2)C(=O)N[C@H](CCS(=O)(=O)C)C3CC3)(F)F" X1L SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ncc(c(n1)Oc2ccccc2)C(=O)NC(CCS(=O)(=O)C)C3CC3)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X1L "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1S)-1-cyclopropyl-3-(methanesulfonyl)propyl]-2-(1,1-difluoroethyl)-4-phenoxypyrimidine-5-carboxamide" X1L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[1,1-bis(fluoranyl)ethyl]-~{N}-[(1~{R})-1-cyclopropyl-3-methylsulfonyl-propyl]-4-phenoxy-pyrimidine-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X1L "Create component" 2023-10-19 RCSB X1L "Initial release" 2024-05-01 RCSB #