data_X2B # _chem_comp.id X2B _chem_comp.name "{N-[1-{[([2,2'-bipyridin]-5-yl-kappa~2~N~1~,N~1'~)methyl]amino}-1-oxo-3-(pyridin-4-yl)propan-2-yl]benzamide}bis[2-(quinolin-2-yl-kappaN)phenyl-kappaC~1~]iridium(1+)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C56 H43 Ir N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2022-10-25 _chem_comp.pdbx_modified_date 2023-01-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1038.203 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X2B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 8EWQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X2B C01 C1 C 0 1 Y N N -22.784 -17.396 -5.757 ? ? ? C01 X2B 1 X2B C02 C2 C 0 1 Y N N -24.209 -19.658 -4.881 ? ? ? C02 X2B 2 X2B C03 C3 C 0 1 Y N N -24.198 -17.314 -5.560 ? ? ? C03 X2B 3 X2B C04 C4 C 0 1 Y N N -22.112 -18.588 -5.484 ? ? ? C04 X2B 4 X2B C05 C5 C 0 1 Y N N -22.809 -19.737 -5.063 ? ? ? C05 X2B 5 X2B C06 C6 C 0 1 Y N N -24.928 -18.452 -5.130 ? ? ? C06 X2B 6 X2B C08 C7 C 0 1 Y N N -26.408 -18.226 -4.986 ? ? ? C08 X2B 7 X2B C09 C8 C 0 1 Y N N -29.133 -17.705 -4.761 ? ? ? C09 X2B 8 X2B C11 C9 C 0 1 Y N N -27.306 -19.229 -4.569 ? ? ? C11 X2B 9 X2B C12 C10 C 0 1 Y N N -28.687 -18.993 -4.445 ? ? ? C12 X2B 10 X2B C13 C11 C 0 1 Y N N -28.185 -16.749 -5.180 ? ? ? C13 X2B 11 X2B C15 C12 C 0 1 Y N N -23.950 -14.793 -7.234 ? ? ? C15 X2B 12 X2B C16 C13 C 0 1 Y N N -22.100 -13.404 -9.068 ? ? ? C16 X2B 13 X2B C17 C14 C 0 1 Y N N -23.797 -15.130 -8.612 ? ? ? C17 X2B 14 X2B C18 C15 C 0 1 Y N N -23.193 -13.655 -6.867 ? ? ? C18 X2B 15 X2B C19 C16 C 0 1 Y N N -22.269 -12.992 -7.731 ? ? ? C19 X2B 16 X2B C20 C17 C 0 1 Y N N -22.881 -14.486 -9.486 ? ? ? C20 X2B 17 X2B C21 C18 C 0 1 Y N N -23.461 -13.322 -5.479 ? ? ? C21 X2B 18 X2B C22 C19 C 0 1 Y N N -24.178 -12.959 -2.836 ? ? ? C22 X2B 19 X2B C24 C20 C 0 1 Y N N -22.854 -12.291 -4.748 ? ? ? C24 X2B 20 X2B C25 C21 C 0 1 Y N N -23.212 -12.098 -3.398 ? ? ? C25 X2B 21 X2B C26 C22 C 0 1 Y N N -24.719 -13.943 -3.661 ? ? ? C26 X2B 22 X2B C27 C23 C 0 1 Y N N -27.754 -11.888 -8.106 ? ? ? C27 X2B 23 X2B C28 C24 C 0 1 Y N N -26.458 -12.774 -6.233 ? ? ? C28 X2B 24 X2B C29 C25 C 0 1 Y N N -26.981 -14.207 -7.973 ? ? ? C29 X2B 25 X2B C30 C26 C 0 1 Y N N -27.665 -13.177 -8.655 ? ? ? C30 X2B 26 X2B C31 C27 C 0 1 Y N N -27.123 -11.709 -6.868 ? ? ? C31 X2B 27 X2B C32 C28 C 0 1 Y N N -26.858 -15.588 -8.508 ? ? ? C32 X2B 28 X2B C33 C29 C 0 1 Y N N -26.507 -18.231 -9.279 ? ? ? C33 X2B 29 X2B C35 C30 C 0 1 Y N N -27.387 -16.057 -9.731 ? ? ? C35 X2B 30 X2B C36 C31 C 0 1 Y N N -27.224 -17.396 -10.155 ? ? ? C36 X2B 31 X2B C37 C32 C 0 1 Y N N -25.996 -17.684 -8.089 ? ? ? C37 X2B 32 X2B C38 C33 C 0 1 Y N N -28.760 -15.498 -5.459 ? ? ? C38 X2B 33 X2B C39 C34 C 0 1 Y N N -30.122 -15.174 -5.349 ? ? ? C39 X2B 34 X2B C40 C35 C 0 1 Y N N -31.043 -16.150 -4.933 ? ? ? C40 X2B 35 X2B C41 C36 C 0 1 Y N N -30.515 -17.419 -4.648 ? ? ? C41 X2B 36 X2B C42 C37 C 0 1 Y N N -25.684 -14.795 -3.092 ? ? ? C42 X2B 37 X2B C43 C38 C 0 1 Y N N -26.135 -14.716 -1.780 ? ? ? C43 X2B 38 X2B C44 C39 C 0 1 Y N N -25.567 -13.718 -0.978 ? ? ? C44 X2B 39 X2B C45 C40 C 0 1 Y N N -24.601 -12.838 -1.496 ? ? ? C45 X2B 40 X2B C46 C41 C 0 1 N N N -26.197 -19.703 -9.626 ? ? ? C46 X2B 41 X2B C48 C42 C 0 1 N N N -23.748 -20.630 -9.642 ? ? ? C48 X2B 42 X2B C49 C43 C 0 1 N N S -22.284 -20.837 -10.063 ? ? ? C49 X2B 43 X2B C50 C44 C 0 1 N N N -21.714 -22.268 -10.077 ? ? ? C50 X2B 44 X2B C53 C45 C 0 1 N N N -20.633 -19.351 -8.553 ? ? ? C53 X2B 45 X2B C54 C46 C 0 1 Y N N -19.762 -18.325 -9.211 ? ? ? C54 X2B 46 X2B C56 C47 C 0 1 Y N N -20.163 -22.347 -10.021 ? ? ? C56 X2B 47 X2B C57 C48 C 0 1 Y N N -18.068 -22.448 -8.850 ? ? ? C57 X2B 48 X2B C59 C49 C 0 1 Y N N -18.047 -22.562 -11.182 ? ? ? C59 X2B 49 X2B C60 C50 C 0 1 Y N N -19.437 -22.458 -11.209 ? ? ? C60 X2B 50 X2B C61 C51 C 0 1 Y N N -19.465 -22.343 -8.820 ? ? ? C61 X2B 51 X2B C62 C52 C 0 1 Y N N -18.769 -17.669 -8.505 ? ? ? C62 X2B 52 X2B C63 C53 C 0 1 Y N N -20.012 -18.096 -10.543 ? ? ? C63 X2B 53 X2B C64 C54 C 0 1 Y N N -19.200 -17.144 -11.184 ? ? ? C64 X2B 54 X2B C65 C55 C 0 1 Y N N -18.197 -16.473 -10.483 ? ? ? C65 X2B 55 X2B C66 C56 C 0 1 Y N N -17.974 -16.738 -9.130 ? ? ? C66 X2B 56 X2B N10 N1 N 0 1 Y N N -26.846 -17.017 -5.384 ? ? ? N10 X2B 57 X2B N14 N2 N 0 1 Y N N -26.396 -14.027 -6.748 ? ? ? N14 X2B 58 X2B N23 N3 N 0 1 Y N N -24.390 -14.118 -4.959 ? ? ? N23 X2B 59 X2B N34 N4 N 0 1 Y N N -26.212 -16.408 -7.661 ? ? ? N34 X2B 60 X2B N47 N5 N 0 1 N N N -24.837 -19.815 -10.217 ? ? ? N47 X2B 61 X2B N52 N6 N 0 1 N N N -21.644 -20.380 -8.843 ? ? ? N52 X2B 62 X2B N58 N7 N 0 1 Y N N -17.382 -22.532 -10.011 ? ? ? N58 X2B 63 X2B O51 O1 O 0 1 N N N -24.028 -21.237 -8.644 ? ? ? O51 X2B 64 X2B O55 O2 O 0 1 N N N -20.315 -19.288 -7.401 ? ? ? O55 X2B 65 X2B IR07 IR1 IR 1 0 N N N -25.378 -15.648 -5.910 ? ? ? IR07 X2B 66 X2B H1 H1 H 0 1 N N N -22.237 -16.537 -6.116 ? ? ? H1 X2B 67 X2B H2 H2 H 0 1 N N N -24.747 -20.532 -4.545 ? ? ? H2 X2B 68 X2B H3 H3 H 0 1 N N N -21.039 -18.630 -5.598 ? ? ? H3 X2B 69 X2B H4 H4 H 0 1 N N N -22.283 -20.663 -4.882 ? ? ? H4 X2B 70 X2B H5 H5 H 0 1 N N N -26.921 -20.211 -4.337 ? ? ? H5 X2B 71 X2B H6 H6 H 0 1 N N N -29.368 -19.766 -4.122 ? ? ? H6 X2B 72 X2B H7 H7 H 0 1 N N N -21.406 -12.911 -9.733 ? ? ? H7 X2B 73 X2B H8 H8 H 0 1 N N N -24.413 -15.921 -9.014 ? ? ? H8 X2B 74 X2B H9 H9 H 0 1 N N N -21.691 -12.162 -7.354 ? ? ? H9 X2B 75 X2B H10 H10 H 0 1 N N N -22.785 -14.842 -10.501 ? ? ? H10 X2B 76 X2B H11 H11 H 0 1 N N N -22.120 -11.651 -5.214 ? ? ? H11 X2B 77 X2B H12 H12 H 0 1 N N N -22.759 -11.313 -2.811 ? ? ? H12 X2B 78 X2B H13 H13 H 0 1 N N N -28.276 -11.085 -8.606 ? ? ? H13 X2B 79 X2B H14 H14 H 0 1 N N N -25.972 -12.584 -5.287 ? ? ? H14 X2B 80 X2B H15 H15 H 0 1 N N N -28.125 -13.383 -9.610 ? ? ? H15 X2B 81 X2B H16 H16 H 0 1 N N N -27.147 -10.739 -6.394 ? ? ? H16 X2B 82 X2B H17 H17 H 0 1 N N N -27.933 -15.371 -10.362 ? ? ? H17 X2B 83 X2B H18 H18 H 0 1 N N N -27.624 -17.755 -11.092 ? ? ? H18 X2B 84 X2B H19 H19 H 0 1 N N N -25.386 -18.323 -7.467 ? ? ? H19 X2B 85 X2B H20 H20 H 0 1 N N N -28.094 -14.714 -5.788 ? ? ? H20 X2B 86 X2B H21 H21 H 0 1 N N N -30.461 -14.176 -5.584 ? ? ? H21 X2B 87 X2B H22 H22 H 0 1 N N N -32.097 -15.936 -4.838 ? ? ? H22 X2B 88 X2B H23 H23 H 0 1 N N N -31.186 -18.204 -4.332 ? ? ? H23 X2B 89 X2B H24 H24 H 0 1 N N N -26.104 -15.566 -3.721 ? ? ? H24 X2B 90 X2B H25 H25 H 0 1 N N N -26.886 -15.391 -1.398 ? ? ? H25 X2B 91 X2B H26 H26 H 0 1 N N N -25.876 -13.623 0.053 ? ? ? H26 X2B 92 X2B H27 H27 H 0 1 N N N -24.182 -12.067 -0.866 ? ? ? H27 X2B 93 X2B H28 H28 H 0 1 N N N -26.939 -20.070 -10.350 ? ? ? H28 X2B 94 X2B H29 H29 H 0 1 N N N -26.247 -20.311 -8.710 ? ? ? H29 X2B 95 X2B H30 H30 H 0 1 N N N -22.012 -20.261 -10.960 ? ? ? H30 X2B 96 X2B H31 H31 H 0 1 N N N -22.117 -22.806 -9.206 ? ? ? H31 X2B 97 X2B H32 H32 H 0 1 N N N -22.050 -22.762 -11.001 ? ? ? H32 X2B 98 X2B H33 H33 H 0 1 N N N -17.523 -22.462 -7.917 ? ? ? H33 X2B 99 X2B H34 H34 H 0 1 N N N -17.499 -22.667 -12.107 ? ? ? H34 X2B 100 X2B H35 H35 H 0 1 N N N -19.956 -22.463 -12.156 ? ? ? H35 X2B 101 X2B H36 H36 H 0 1 N N N -19.990 -22.260 -7.880 ? ? ? H36 X2B 102 X2B H37 H37 H 0 1 N N N -18.618 -17.889 -7.459 ? ? ? H37 X2B 103 X2B H38 H38 H 0 1 N N N -20.794 -18.622 -11.071 ? ? ? H38 X2B 104 X2B H39 H39 H 0 1 N N N -19.354 -16.929 -12.231 ? ? ? H39 X2B 105 X2B H40 H40 H 0 1 N N N -17.587 -15.741 -10.992 ? ? ? H40 X2B 106 X2B H41 H41 H 0 1 N N N -17.195 -16.223 -8.587 ? ? ? H41 X2B 107 X2B H42 H42 H 0 1 N N N -24.648 -19.306 -11.057 ? ? ? H42 X2B 108 X2B H43 H43 H 0 1 N N N -21.956 -20.867 -8.027 ? ? ? H43 X2B 109 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X2B C60 C59 DOUB Y N 1 X2B C60 C56 SING Y N 2 X2B C64 C63 DOUB Y N 3 X2B C64 C65 SING Y N 4 X2B C59 N58 SING Y N 5 X2B C63 C54 SING Y N 6 X2B C65 C66 DOUB Y N 7 X2B N47 C48 SING N N 8 X2B N47 C46 SING N N 9 X2B C36 C35 DOUB Y N 10 X2B C36 C33 SING Y N 11 X2B C50 C49 SING N N 12 X2B C50 C56 SING N N 13 X2B C49 C48 SING N N 14 X2B C49 N52 SING N N 15 X2B C56 C61 DOUB Y N 16 X2B N58 C57 DOUB Y N 17 X2B C35 C32 SING Y N 18 X2B C48 O51 DOUB N N 19 X2B C46 C33 SING N N 20 X2B C20 C16 DOUB Y N 21 X2B C20 C17 SING Y N 22 X2B C33 C37 DOUB Y N 23 X2B C54 C53 SING N N 24 X2B C54 C62 DOUB Y N 25 X2B C66 C62 SING Y N 26 X2B C16 C19 SING Y N 27 X2B C57 C61 SING Y N 28 X2B N52 C53 SING N N 29 X2B C30 C27 DOUB Y N 30 X2B C30 C29 SING Y N 31 X2B C17 C15 DOUB Y N 32 X2B C53 O55 DOUB N N 33 X2B C32 C29 SING N N 34 X2B C32 N34 DOUB Y N 35 X2B C27 C31 SING Y N 36 X2B C37 N34 SING Y N 37 X2B C29 N14 DOUB Y N 38 X2B C19 C18 DOUB Y N 39 X2B N34 IR07 SING N N 40 X2B C15 C18 SING Y N 41 X2B C15 IR07 SING N N 42 X2B C31 C28 DOUB Y N 43 X2B C18 C21 SING N N 44 X2B N14 C28 SING Y N 45 X2B N14 IR07 SING N N 46 X2B IR07 C03 SING N N 47 X2B IR07 N10 SING N N 48 X2B IR07 N23 SING N N 49 X2B C01 C03 DOUB Y N 50 X2B C01 C04 SING Y N 51 X2B C03 C06 SING Y N 52 X2B C04 C05 DOUB Y N 53 X2B C21 N23 DOUB Y N 54 X2B C21 C24 SING Y N 55 X2B C38 C39 DOUB Y N 56 X2B C38 C13 SING Y N 57 X2B N10 C13 DOUB Y N 58 X2B N10 C08 SING Y N 59 X2B C39 C40 SING Y N 60 X2B C13 C09 SING Y N 61 X2B C06 C08 SING N N 62 X2B C06 C02 DOUB Y N 63 X2B C05 C02 SING Y N 64 X2B C08 C11 DOUB Y N 65 X2B N23 C26 SING Y N 66 X2B C40 C41 DOUB Y N 67 X2B C09 C41 SING Y N 68 X2B C09 C12 DOUB Y N 69 X2B C24 C25 DOUB Y N 70 X2B C11 C12 SING Y N 71 X2B C26 C42 DOUB Y N 72 X2B C26 C22 SING Y N 73 X2B C25 C22 SING Y N 74 X2B C42 C43 SING Y N 75 X2B C22 C45 DOUB Y N 76 X2B C43 C44 DOUB Y N 77 X2B C45 C44 SING Y N 78 X2B C01 H1 SING N N 79 X2B C02 H2 SING N N 80 X2B C04 H3 SING N N 81 X2B C05 H4 SING N N 82 X2B C11 H5 SING N N 83 X2B C12 H6 SING N N 84 X2B C16 H7 SING N N 85 X2B C17 H8 SING N N 86 X2B C19 H9 SING N N 87 X2B C20 H10 SING N N 88 X2B C24 H11 SING N N 89 X2B C25 H12 SING N N 90 X2B C27 H13 SING N N 91 X2B C28 H14 SING N N 92 X2B C30 H15 SING N N 93 X2B C31 H16 SING N N 94 X2B C35 H17 SING N N 95 X2B C36 H18 SING N N 96 X2B C37 H19 SING N N 97 X2B C38 H20 SING N N 98 X2B C39 H21 SING N N 99 X2B C40 H22 SING N N 100 X2B C41 H23 SING N N 101 X2B C42 H24 SING N N 102 X2B C43 H25 SING N N 103 X2B C44 H26 SING N N 104 X2B C45 H27 SING N N 105 X2B C46 H28 SING N N 106 X2B C46 H29 SING N N 107 X2B C49 H30 SING N N 108 X2B C50 H31 SING N N 109 X2B C50 H32 SING N N 110 X2B C57 H33 SING N N 111 X2B C59 H34 SING N N 112 X2B C60 H35 SING N N 113 X2B C61 H36 SING N N 114 X2B C62 H37 SING N N 115 X2B C63 H38 SING N N 116 X2B C64 H39 SING N N 117 X2B C65 H40 SING N N 118 X2B C66 H41 SING N N 119 X2B N47 H42 SING N N 120 X2B N52 H43 SING N N 121 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X2B SMILES ACDLabs 12.01 "O=C(NCc1ccc2c3ccccn3[Ir+]34(c5ccccc5c5ccc6ccccc6n53)(c3ccccc3c3ccc5ccccc5n34)n2c1)C(NC(=O)c1ccccc1)Cc1ccncc1" X2B InChI InChI 1.06 "InChI=1S/C26H23N5O2.2C15H10N.Ir/c32-25(21-6-2-1-3-7-21)31-24(16-19-11-14-27-15-12-19)26(33)30-18-20-9-10-23(29-17-20)22-8-4-5-13-28-22;2*1-2-6-12(7-3-1)15-11-10-13-8-4-5-9-14(13)16-15;/h1-15,17,24H,16,18H2,(H,30,33)(H,31,32);2*1-6,8-11H;/q;;;+1/t24-;;;/m0.../s1" X2B InChIKey InChI 1.06 BFGVORUPINRCOM-VRMKZKMYSA-N X2B SMILES_CANONICAL CACTVS 3.385 "O=C(NCc1ccc(nc1)c2ccccn2)[C@H](Cc3ccncc3)NC(=O)c4ccccc4.[Ir+](c5ccccc5c6ccc7ccccc7n6)c8ccccc8c9ccc%10ccccc%10n9" X2B SMILES CACTVS 3.385 "O=C(NCc1ccc(nc1)c2ccccn2)[CH](Cc3ccncc3)NC(=O)c4ccccc4.[Ir+](c5ccccc5c6ccc7ccccc7n6)c8ccccc8c9ccc%10ccccc%10n9" X2B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=O)N[C@@H](Cc2ccncc2)C(=O)NCC3=C[N]4=C(C=C3)C5=[N]([Ir+]467(c8ccccc8C9=[N]6c1ccccc1C=C9)c1ccccc1C1=CC=C2C=CC=CC2=[N]71)C=CC=C5" X2B SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=O)NC(Cc2ccncc2)C(=O)NCC3=C[N]4=C(C=C3)C5=[N]([Ir+]467(c8ccccc8C9=[N]6c1ccccc1C=C9)c1ccccc1C1=CC=C2C=CC=CC2=[N]71)C=CC=C5" # _pdbx_chem_comp_identifier.comp_id X2B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "{N-[1-{[([2,2'-bipyridin]-5-yl-kappa~2~N~1~,N~1'~)methyl]amino}-1-oxo-3-(pyridin-4-yl)propan-2-yl]benzamide}bis[2-(quinolin-2-yl-kappaN)phenyl-kappaC~1~]iridium(1+)" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X2B "Create component" 2022-10-25 RCSB X2B "Initial release" 2023-02-01 RCSB #