data_X2J # _chem_comp.id X2J _chem_comp.name "4-{3-chloro-5-[(E)-2-cyanoethenyl]phenoxy}-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H15 Cl F N3 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-23 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 507.876 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X2J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7KRC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X2J C15 C1 C 0 1 N N N 49.032 -29.930 28.249 6.759 -0.681 -1.184 C15 X2J 1 X2J C00 C2 C 0 1 Y N N 45.380 -29.711 19.927 -1.698 1.845 0.204 C00 X2J 2 X2J C01 C3 C 0 1 Y N N 46.147 -28.915 19.069 -0.937 2.741 0.940 C01 X2J 3 X2J C02 C4 C 0 1 Y N N 47.412 -28.547 19.553 0.388 2.453 1.229 C02 X2J 4 X2J C03 C5 C 0 1 Y N N 47.895 -28.927 20.807 0.953 1.271 0.786 C03 X2J 5 X2J C04 C6 C 0 1 Y N N 47.086 -29.704 21.643 0.196 0.373 0.052 C04 X2J 6 X2J C05 C7 C 0 1 Y N N 45.823 -30.090 21.205 -1.134 0.661 -0.241 C05 X2J 7 X2J C0C C8 C 0 1 Y N N 47.361 -29.340 24.092 2.052 -1.032 -0.070 C0C X2J 8 X2J C0D C9 C 0 1 N N N 43.865 -31.282 21.492 -3.239 0.137 -1.215 C0D X2J 9 X2J C0E C10 C 0 1 N N N 43.198 -32.223 22.457 -3.913 -0.971 -2.027 C0E X2J 10 X2J C0K C11 C 0 1 N N N 44.070 -34.535 22.156 -5.053 -2.421 -0.444 C0K X2J 11 X2J C0N C12 C 0 1 N N N 45.582 -35.460 23.862 -4.148 -4.449 0.282 C0N X2J 12 X2J C0O C13 C 0 1 N N N 45.533 -34.179 24.674 -3.014 -4.223 -0.535 C0O X2J 13 X2J C0P C14 C 0 1 N N N 44.780 -33.158 24.238 -2.952 -3.095 -1.275 C0P X2J 14 X2J C0V C15 C 0 1 Y N N 46.687 -28.168 23.983 2.368 -1.702 1.105 C0V X2J 15 X2J C0W C16 C 0 1 Y N N 46.523 -27.323 25.060 3.689 -1.958 1.429 C0W X2J 16 X2J C0X C17 C 0 1 Y N N 47.047 -27.619 26.283 4.703 -1.548 0.587 C0X X2J 17 X2J C0Y C18 C 0 1 Y N N 47.748 -28.779 26.456 4.395 -0.872 -0.598 C0Y X2J 18 X2J C0Z C19 C 0 1 Y N N 47.903 -29.637 25.368 3.060 -0.615 -0.923 C0Z X2J 19 X2J C13 C20 C 0 1 N N N 48.266 -28.963 27.870 5.473 -0.432 -1.500 C13 X2J 20 X2J C17 C21 C 0 1 N N N 49.537 -29.997 29.680 7.808 -0.253 -2.061 C17 X2J 21 X2J N0H N1 N 0 1 N N N 44.006 -33.321 22.963 -3.980 -2.194 -1.224 N0H X2J 22 X2J N0M N2 N 0 1 N N N 44.852 -35.601 22.651 -5.140 -3.536 0.304 N0M X2J 23 X2J N19 N3 N 0 1 N N N 49.926 -30.047 30.753 8.639 0.086 -2.756 N19 X2J 24 X2J O07 O1 O 0 1 N N N 45.635 -28.508 17.765 -1.490 3.904 1.376 O07 X2J 25 X2J O0A O2 O 0 1 N N N 47.491 -30.130 22.934 0.753 -0.789 -0.385 O0A X2J 26 X2J O0B O3 O 0 1 N N N 45.056 -30.847 22.069 -1.880 -0.222 -0.957 O0B X2J 27 X2J O0Q O4 O 0 1 N N N 43.447 -34.612 21.122 -5.953 -1.604 -0.410 O0Q X2J 28 X2J O0S O5 O 0 1 N N N 46.248 -36.368 24.268 -4.227 -5.459 0.959 O0S X2J 29 X2J O1C O6 O 0 1 N N N 43.213 -27.396 18.175 -1.645 6.244 1.131 O1C X2J 30 X2J O1D O7 O 0 1 N N N 44.436 -27.046 16.045 -0.119 4.861 -0.286 O1D X2J 31 X2J S1A S1 S 0 1 N N N 44.524 -27.171 17.532 -1.348 5.062 0.399 S1A X2J 32 X2J CL11 CL1 CL 0 0 N N N 45.617 -25.820 24.844 4.072 -2.796 2.900 CL11 X2J 33 X2J H18 H1 H 0 1 N N N 49.316 -30.697 27.544 7.000 -1.199 -0.267 H18 X2J 34 X2J H06 H2 H 0 1 N N N 44.409 -30.047 19.594 -2.731 2.068 -0.018 H06 X2J 35 X2J H08 H3 H 0 1 N N N 48.044 -27.939 18.923 0.980 3.151 1.802 H08 X2J 36 X2J H09 H4 H 0 1 N N N 48.881 -28.625 21.127 1.985 1.048 1.013 H09 X2J 37 X2J H0G H5 H 0 1 N N N 43.209 -30.421 21.296 -3.269 1.070 -1.778 H0G X2J 38 X2J H0F H6 H 0 1 N N N 44.077 -31.804 20.547 -3.766 0.266 -0.269 H0F X2J 39 X2J H0J H7 H 0 1 N N N 42.862 -31.631 23.321 -4.922 -0.659 -2.300 H0J X2J 40 X2J H0I H8 H 0 1 N N N 42.325 -32.658 21.949 -3.335 -1.161 -2.932 H0I X2J 41 X2J H0T H9 H 0 1 N N N 46.097 -34.090 25.591 -2.210 -4.943 -0.566 H0T X2J 42 X2J H0U H10 H 0 1 N N N 44.732 -32.234 24.795 -2.095 -2.906 -1.904 H0U X2J 43 X2J H10 H11 H 0 1 N N N 46.268 -27.889 23.027 1.579 -2.025 1.768 H10 X2J 44 X2J H12 H12 H 0 1 N N N 46.909 -26.940 27.111 5.733 -1.748 0.842 H12 X2J 45 X2J H14 H13 H 0 1 N N N 48.453 -30.557 25.501 2.816 -0.094 -1.837 H14 X2J 46 X2J H16 H14 H 0 1 N N N 47.973 -28.234 28.611 5.232 0.090 -2.414 H16 X2J 47 X2J H0R H15 H 0 1 N N N 44.893 -36.463 22.145 -5.920 -3.684 0.862 H0R X2J 48 X2J F1 F1 F 0 1 N Y N 44.895 -25.626 18.174 -2.513 4.904 -0.701 F1 X2J 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X2J O1D S1A DOUB N N 1 X2J S1A O07 SING N N 2 X2J S1A O1C DOUB N N 3 X2J O07 C01 SING N N 4 X2J C01 C02 DOUB Y N 5 X2J C01 C00 SING Y N 6 X2J C02 C03 SING Y N 7 X2J C00 C05 DOUB Y N 8 X2J C03 C04 DOUB Y N 9 X2J O0Q C0K DOUB N N 10 X2J C05 C04 SING Y N 11 X2J C05 O0B SING N N 12 X2J C0D O0B SING N N 13 X2J C0D C0E SING N N 14 X2J C04 O0A SING N N 15 X2J C0K N0M SING N N 16 X2J C0K N0H SING N N 17 X2J C0E N0H SING N N 18 X2J N0M C0N SING N N 19 X2J O0A C0C SING N N 20 X2J N0H C0P SING N N 21 X2J C0N O0S DOUB N N 22 X2J C0N C0O SING N N 23 X2J C0V C0C DOUB Y N 24 X2J C0V C0W SING Y N 25 X2J C0C C0Z SING Y N 26 X2J C0P C0O DOUB N N 27 X2J CL11 C0W SING N N 28 X2J C0W C0X DOUB Y N 29 X2J C0Z C0Y DOUB Y N 30 X2J C0X C0Y SING Y N 31 X2J C0Y C13 SING N N 32 X2J C13 C15 DOUB N E 33 X2J C15 C17 SING N N 34 X2J C17 N19 TRIP N N 35 X2J C15 H18 SING N N 36 X2J C00 H06 SING N N 37 X2J C02 H08 SING N N 38 X2J C03 H09 SING N N 39 X2J C0D H0G SING N N 40 X2J C0D H0F SING N N 41 X2J C0E H0J SING N N 42 X2J C0E H0I SING N N 43 X2J C0O H0T SING N N 44 X2J C0P H0U SING N N 45 X2J C0V H10 SING N N 46 X2J C0X H12 SING N N 47 X2J C0Z H14 SING N N 48 X2J C13 H16 SING N N 49 X2J N0M H0R SING N N 50 X2J S1A F1 SING N N 51 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X2J SMILES ACDLabs 12.01 "[C@H](C#N)=Cc1cc(cc(c1)Oc2ccc(cc2OCCN3C(NC(=O)C=C3)=O)OS(=O)(=O)F)Cl" X2J InChI InChI 1.03 "InChI=1S/C21H15ClFN3O7S/c22-15-10-14(2-1-6-24)11-17(12-15)32-18-4-3-16(33-34(23,29)30)13-19(18)31-9-8-26-7-5-20(27)25-21(26)28/h1-5,7,10-13H,8-9H2,(H,25,27,28)/b2-1+" X2J InChIKey InChI 1.03 RUPMZEQONCTYBJ-OWOJBTEDSA-N X2J SMILES_CANONICAL CACTVS 3.385 "F[S](=O)(=O)Oc1ccc(Oc2cc(Cl)cc(\C=C\C#N)c2)c(OCCN3C=CC(=O)NC3=O)c1" X2J SMILES CACTVS 3.385 "F[S](=O)(=O)Oc1ccc(Oc2cc(Cl)cc(C=CC#N)c2)c(OCCN3C=CC(=O)NC3=O)c1" X2J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)/C=C/C#N" X2J SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)C=CC#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X2J "SYSTEMATIC NAME" ACDLabs 12.01 "4-{3-chloro-5-[(E)-2-cyanoethenyl]phenoxy}-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate" X2J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[2-[2-[3-chloranyl-5-[(~{E})-2-cyanoethenyl]phenoxy]-5-fluorosulfonyloxy-phenoxy]ethyl]-2,4-bis(oxidanylidene)pyrimidine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X2J "Create component" 2020-11-23 RCSB X2J "Initial release" 2021-01-13 RCSB ##