data_X3J # _chem_comp.id X3J _chem_comp.name "(2S)-2-{2-[(2-AMINOETHYL)AMINO]-2-OXOETHYL}-2-HYDROXYBUTANEDIOIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H14 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-01-25 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.207 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X3J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2X3J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X3J "C'" "C'" C 0 1 N N N -7.206 -14.289 -28.252 -3.591 -0.476 0.006 "C'" X3J 1 X3J "O1'" "O1'" O 0 1 N N N -8.013 -14.826 -29.055 -4.789 -0.970 -0.343 "O1'" X3J 2 X3J "O2'" "O2'" O 0 1 N N N -7.376 -14.143 -27.019 -3.523 0.516 0.693 "O2'" X3J 3 X3J C1 C1 C 0 1 N N N -5.881 -13.730 -28.792 -2.330 -1.162 -0.454 C1 X3J 4 X3J C3 C3 C 0 1 N N N -7.971 -15.187 -35.257 5.047 -0.543 -0.395 C3 X3J 5 X3J N3 N3 N 0 1 N N N -8.984 -14.751 -36.237 6.215 0.187 0.115 N3 X3J 6 X3J O3 O3 O 0 1 N N N -5.757 -15.372 -30.614 -1.088 -0.481 1.504 O3 X3J 7 X3J CM3 CM3 C 0 1 N N N -4.067 -13.589 -30.470 -1.199 1.042 -0.344 CM3 X3J 8 X3J "O3'" "O3'" O 0 1 N N N -3.263 -14.470 -30.844 -1.236 1.360 -1.647 "O3'" X3J 9 X3J C4 C4 C 0 1 N N N -7.133 -13.982 -34.862 3.770 0.079 0.173 C4 X3J 10 X3J N4 N4 N 0 1 N N N -7.248 -13.703 -33.411 2.604 -0.649 -0.336 N4 X3J 11 X3J "C4'" "C4'" C 0 1 N N N -6.176 -13.384 -32.690 1.363 -0.275 0.033 "C4'" X3J 12 X3J CAP CAP C 0 1 N N S -5.551 -13.986 -30.281 -1.113 -0.402 0.078 CAP X3J 13 X3J O4 O4 O 0 1 N N N -5.033 -13.312 -33.158 1.210 0.663 0.786 O4 X3J 14 X3J CM4 CM4 C 0 1 N N N -6.448 -13.115 -31.190 0.164 -1.024 -0.490 CM4 X3J 15 X3J OAF OAF O 0 1 N N N -3.759 -12.406 -30.229 -1.236 1.914 0.492 OAF X3J 16 X3J "H1'" "H1'" H 0 1 N N N -8.787 -15.111 -28.584 -5.569 -0.498 -0.021 "H1'" X3J 17 X3J H11C H11C H 0 0 N N N -5.916 -12.639 -28.656 -2.314 -2.184 -0.075 H11C X3J 18 X3J H12C H12C H 0 0 N N N -5.098 -14.262 -28.231 -2.302 -1.178 -1.543 H12C X3J 19 X3J H31C H31C H 0 0 N N N -8.467 -15.603 -34.368 5.028 -0.482 -1.483 H31C X3J 20 X3J H32C H32C H 0 0 N N N -7.329 -15.964 -35.699 5.109 -1.587 -0.090 H32C X3J 21 X3J H31N H31N H 0 0 N N N -9.869 -14.652 -35.781 6.221 0.200 1.124 H31N X3J 22 X3J H32N H32N H 0 0 N N N -8.712 -13.872 -36.629 7.072 -0.205 -0.246 H32N X3J 23 X3J H41C H41C H 0 0 N N N -6.079 -14.186 -35.103 3.789 0.019 1.261 H41C X3J 24 X3J H42C H42C H 0 0 N N N -7.498 -13.105 -35.417 3.707 1.124 -0.132 H42C X3J 25 X3J H3 H3 H 0 1 N N N -5.802 -15.468 -31.558 -1.033 -1.384 1.847 H3 X3J 26 X3J "H3'" "H3'" H 0 1 N N N -2.392 -14.096 -30.913 -1.292 2.299 -1.869 "H3'" X3J 27 X3J H4 H4 H 0 1 N N N -8.143 -13.755 -32.968 2.726 -1.399 -0.938 H4 X3J 28 X3J HM41 HM41 H 0 0 N N N -6.242 -12.055 -30.978 0.145 -0.964 -1.578 HM41 X3J 29 X3J HM42 HM42 H 0 0 N N N -7.498 -13.367 -30.980 0.227 -2.069 -0.185 HM42 X3J 30 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X3J "C'" "O1'" SING N N 1 X3J "C'" "O2'" DOUB N N 2 X3J "C'" C1 SING N N 3 X3J C1 CAP SING N N 4 X3J C3 N3 SING N N 5 X3J C3 C4 SING N N 6 X3J O3 CAP SING N N 7 X3J CM3 "O3'" SING N N 8 X3J CM3 CAP SING N N 9 X3J CM3 OAF DOUB N N 10 X3J C4 N4 SING N N 11 X3J N4 "C4'" SING N N 12 X3J "C4'" O4 DOUB N N 13 X3J "C4'" CM4 SING N N 14 X3J CM4 CAP SING N N 15 X3J "O1'" "H1'" SING N N 16 X3J C1 H11C SING N N 17 X3J C1 H12C SING N N 18 X3J C3 H31C SING N N 19 X3J C3 H32C SING N N 20 X3J N3 H31N SING N N 21 X3J N3 H32N SING N N 22 X3J C4 H41C SING N N 23 X3J C4 H42C SING N N 24 X3J O3 H3 SING N N 25 X3J "O3'" "H3'" SING N N 26 X3J N4 H4 SING N N 27 X3J CM4 HM41 SING N N 28 X3J CM4 HM42 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X3J SMILES ACDLabs 10.04 "O=C(O)CC(O)(C(=O)O)CC(=O)NCCN" X3J SMILES_CANONICAL CACTVS 3.352 "NCCNC(=O)C[C@](O)(CC(O)=O)C(O)=O" X3J SMILES CACTVS 3.352 "NCCNC(=O)C[C](O)(CC(O)=O)C(O)=O" X3J SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C(CNC(=O)C[C@](CC(=O)O)(C(=O)O)O)N" X3J SMILES "OpenEye OEToolkits" 1.6.1 "C(CNC(=O)CC(CC(=O)O)(C(=O)O)O)N" X3J InChI InChI 1.03 "InChI=1S/C8H14N2O6/c9-1-2-10-5(11)3-8(16,7(14)15)4-6(12)13/h16H,1-4,9H2,(H,10,11)(H,12,13)(H,14,15)/t8-/m0/s1" X3J InChIKey InChI 1.03 KQWWDTIPDRWKGZ-QMMMGPOBSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X3J "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-2-{2-[(2-aminoethyl)amino]-2-oxoethyl}-2-hydroxybutanedioic acid" X3J "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S)-2-[2-(2-aminoethylamino)-2-oxo-ethyl]-2-hydroxy-butanedioic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X3J "Create component" 2010-01-25 EBI X3J "Modify descriptor" 2011-06-04 RCSB X3J "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id X3J _pdbx_chem_comp_synonyms.name "5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##