data_X4X # _chem_comp.id X4X _chem_comp.name "(9R,10E,12Z)-9-hydroxy-N-(2-hydroxyethyl)octadeca-10,12-dienamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H37 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-27 _chem_comp.pdbx_modified_date 2024-05-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X4X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8EY9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X4X C10 C1 C 0 1 N N N N N N -95.456 33.257 -34.822 -8.673 -1.873 -0.380 C10 X4X 1 X4X C11 C2 C 0 1 N N N N N N -95.137 18.784 -40.179 7.016 -0.723 -0.003 C11 X4X 2 X4X C12 C3 C 0 1 N N N N N N -95.015 30.834 -35.445 -7.213 -0.011 -1.182 C12 X4X 3 X4X C13 C4 C 0 1 N N N N N N -94.874 33.421 -33.418 -10.010 -2.217 0.279 C13 X4X 4 X4X C14 C5 C 0 1 N N N N N N -92.236 28.033 -36.829 -3.888 1.968 0.299 C14 X4X 5 X4X C15 C6 C 0 1 N N N N N N -93.176 28.843 -36.387 -4.905 1.340 -0.282 C15 X4X 6 X4X C16 C7 C 0 1 N N N N N N -94.040 30.162 -34.482 -7.092 1.485 -1.322 C16 X4X 7 X4X C17 C8 C 0 1 N N N N N N -93.193 29.252 -34.916 -6.028 2.114 -0.835 C17 X4X 8 X4X C18 C9 C 0 1 N N N N N N -93.348 33.466 -33.405 -10.133 -3.736 0.421 C18 X4X 9 X4X C19 C10 C 0 1 N N N N N N -93.180 17.401 -39.360 9.358 -1.393 -0.022 C19 X4X 10 X4X C20 C11 C 0 1 N N N N N N -92.859 15.945 -39.028 10.655 -0.982 -0.722 C20 X4X 11 X4X C01 C12 C 0 1 N N N N N N -93.478 22.705 -38.377 2.148 0.220 0.435 C01 X4X 12 X4X C02 C13 C 0 1 N N N N N N -93.981 24.145 -38.448 1.001 1.110 -0.050 C02 X4X 13 X4X C03 C14 C 0 1 N N N N N N -94.618 21.690 -38.420 3.444 0.632 -0.265 C03 X4X 14 X4X C04 C15 C 0 1 N N N N N N -92.866 25.163 -38.217 -0.295 0.698 0.650 C04 X4X 15 X4X C05 C16 C 0 1 N N N N N N -94.980 21.294 -39.849 4.590 -0.258 0.220 C05 X4X 16 X4X C06 C17 C 0 1 N N N N N N -93.314 26.587 -38.540 -1.442 1.587 0.166 C06 X4X 17 X4X C07 C18 C 0 1 N N N N N N -94.260 20.027 -40.308 5.887 0.154 -0.480 C07 X4X 18 X4X C08 C19 C 0 1 N N R N N N -92.214 27.618 -38.298 -2.738 1.176 0.866 C08 X4X 19 X4X C09 C20 C 0 1 N N N N N N -94.652 32.296 -35.696 -8.550 -0.355 -0.523 C09 X4X 20 X4X N01 N1 N 0 1 N N N N N N -94.582 17.525 -39.714 8.261 -0.541 -0.486 N01 X4X 21 X4X O01 O1 O 0 1 N N N N N N -96.283 18.849 -40.462 6.805 -1.591 0.817 O01 X4X 22 X4X O02 O2 O 0 1 N N N N N N -92.434 28.741 -39.104 -2.626 1.434 2.267 O02 X4X 23 X4X O03 O3 O 0 1 N N N N N N -91.970 15.640 -37.990 11.011 0.344 -0.324 O03 X4X 24 X4X H1 H1 H 0 1 N N N N N N -95.474 34.242 -35.311 -7.856 -2.247 0.238 H1 X4X 25 X4X H2 H2 H 0 1 N N N N N N -96.483 32.873 -34.733 -8.624 -2.336 -1.366 H2 X4X 26 X4X H3 H3 H 0 1 N N N N N N -96.027 30.788 -35.016 -7.164 -0.474 -2.167 H3 X4X 27 X4X H4 H4 H 0 1 N N N N N N -94.998 30.294 -36.403 -6.396 -0.385 -0.564 H4 X4X 28 X4X H5 H5 H 0 1 N N N N N N -95.256 34.359 -32.988 -10.059 -1.755 1.265 H5 X4X 29 X4X H6 H6 H 0 1 N N N N N N -95.205 32.573 -32.800 -10.826 -1.843 -0.339 H6 X4X 30 X4X H7 H7 H 0 1 N N N N N N -91.481 27.662 -36.152 -3.887 3.046 0.367 H7 X4X 31 X4X H8 H8 H 0 1 N N N N N N -93.932 29.216 -37.062 -4.907 0.262 -0.350 H8 X4X 32 X4X H9 H9 H 0 1 N N N N N N -94.045 30.435 -33.437 -7.870 2.045 -1.819 H9 X4X 33 X4X H10 H10 H 0 1 N N N N N N -92.504 28.790 -34.225 -5.987 3.193 -0.845 H10 X4X 34 X4X H11 H11 H 0 1 N N N N N N -92.993 33.585 -32.371 -11.085 -3.981 0.891 H11 X4X 35 X4X H12 H12 H 0 1 N N N N N N -92.950 32.530 -33.824 -10.084 -4.198 -0.564 H12 X4X 36 X4X H13 H13 H 0 1 N N N N N N -93.001 34.316 -34.011 -9.316 -4.110 1.039 H13 X4X 37 X4X H14 H14 H 0 1 N N N N N N -92.559 17.728 -40.207 9.134 -2.434 -0.256 H14 X4X 38 X4X H15 H15 H 0 1 N N N N N N -92.967 18.031 -38.484 9.476 -1.280 1.056 H15 X4X 39 X4X H16 H16 H 0 1 N N N N N N -93.814 15.458 -38.780 11.453 -1.671 -0.445 H16 X4X 40 X4X H17 H17 H 0 1 N N N N N N -92.445 15.495 -39.942 10.510 -1.010 -1.802 H17 X4X 41 X4X H18 H18 H 0 1 N N N N N N -92.809 22.522 -39.231 2.265 0.333 1.513 H18 X4X 42 X4X H19 H19 H 0 1 N N N N N N -92.920 22.571 -37.438 1.923 -0.821 0.202 H19 X4X 43 X4X H20 H20 H 0 1 N N N N N N -94.417 24.318 -39.443 1.225 2.150 0.184 H20 X4X 44 X4X H21 H21 H 0 1 N N N N N N -94.754 24.287 -37.679 0.884 0.996 -1.128 H21 X4X 45 X4X H22 H22 H 0 1 N N N N N N -95.504 22.131 -37.939 3.327 0.518 -1.343 H22 X4X 46 X4X H23 H23 H 0 1 N N N N N N -94.312 20.789 -37.869 3.668 1.672 -0.031 H23 X4X 47 X4X H24 H24 H 0 1 N N N N N N -92.011 24.905 -38.860 -0.520 -0.343 0.417 H24 X4X 48 X4X H25 H25 H 0 1 N N N N N N -92.558 25.119 -37.162 -0.178 0.811 1.728 H25 X4X 49 X4X H26 H26 H 0 1 N N N N N N -94.706 22.119 -40.523 4.707 -0.145 1.298 H26 X4X 50 X4X H27 H27 H 0 1 N N N N N N -96.065 21.122 -39.903 4.366 -1.299 -0.014 H27 X4X 51 X4X H28 H28 H 0 1 N N N N N N -94.177 26.837 -37.906 -1.217 2.628 0.399 H28 X4X 52 X4X H29 H29 H 0 1 N N N N N N -93.612 26.631 -39.598 -1.559 1.474 -0.912 H29 X4X 53 X4X H30 H30 H 0 1 N N N N N N -93.359 19.890 -39.693 6.111 1.194 -0.247 H30 X4X 54 X4X H31 H31 H 0 1 N N N N N N -93.969 20.147 -41.362 5.770 0.040 -1.558 H31 X4X 55 X4X H32 H32 H 0 1 N N N N N N -91.240 27.161 -38.525 -2.916 0.112 0.705 H32 X4X 56 X4X H33 H33 H 0 1 N N N N N N -93.582 32.436 -35.482 -9.366 0.019 -1.141 H33 X4X 57 X4X H34 H34 H 0 1 N N N N N N -94.848 32.532 -36.752 -8.599 0.108 0.463 H34 X4X 58 X4X H35 H35 H 0 1 N N N N N N -95.179 16.726 -39.636 8.430 0.153 -1.142 H35 X4X 59 X4X H36 H36 H 0 1 N N N N N N -91.748 29.380 -38.951 -2.467 2.362 2.484 H36 X4X 60 X4X H37 H37 H 0 1 N N N N N N -91.881 14.697 -37.915 11.825 0.671 -0.730 H37 X4X 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X4X O01 C11 DOUB N N 1 X4X C07 C11 SING N N 2 X4X C07 C05 SING N N 3 X4X C11 N01 SING N N 4 X4X C05 C03 SING N N 5 X4X N01 C19 SING N N 6 X4X C19 C20 SING N N 7 X4X O02 C08 SING N N 8 X4X C20 O03 SING N N 9 X4X C06 C08 SING N N 10 X4X C06 C04 SING N N 11 X4X C02 C01 SING N N 12 X4X C02 C04 SING N N 13 X4X C03 C01 SING N N 14 X4X C08 C14 SING N N 15 X4X C14 C15 DOUB N E 16 X4X C15 C17 SING N N 17 X4X C09 C12 SING N N 18 X4X C09 C10 SING N N 19 X4X C12 C16 SING N N 20 X4X C17 C16 DOUB N Z 21 X4X C10 C13 SING N N 22 X4X C13 C18 SING N N 23 X4X C10 H1 SING N N 24 X4X C10 H2 SING N N 25 X4X C12 H3 SING N N 26 X4X C12 H4 SING N N 27 X4X C13 H5 SING N N 28 X4X C13 H6 SING N N 29 X4X C14 H7 SING N N 30 X4X C15 H8 SING N N 31 X4X C16 H9 SING N N 32 X4X C17 H10 SING N N 33 X4X C18 H11 SING N N 34 X4X C18 H12 SING N N 35 X4X C18 H13 SING N N 36 X4X C19 H14 SING N N 37 X4X C19 H15 SING N N 38 X4X C20 H16 SING N N 39 X4X C20 H17 SING N N 40 X4X C01 H18 SING N N 41 X4X C01 H19 SING N N 42 X4X C02 H20 SING N N 43 X4X C02 H21 SING N N 44 X4X C03 H22 SING N N 45 X4X C03 H23 SING N N 46 X4X C04 H24 SING N N 47 X4X C04 H25 SING N N 48 X4X C05 H26 SING N N 49 X4X C05 H27 SING N N 50 X4X C06 H28 SING N N 51 X4X C06 H29 SING N N 52 X4X C07 H30 SING N N 53 X4X C07 H31 SING N N 54 X4X C08 H32 SING N N 55 X4X C09 H33 SING N N 56 X4X C09 H34 SING N N 57 X4X N01 H35 SING N N 58 X4X O02 H36 SING N N 59 X4X O03 H37 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X4X SMILES ACDLabs 12.01 "OCCNC(=O)CCCCCCCC(O)\C=C\C=C/CCCCC" X4X InChI InChI 1.06 "InChI=1S/C20H37NO3/c1-2-3-4-5-6-8-11-14-19(23)15-12-9-7-10-13-16-20(24)21-17-18-22/h6,8,11,14,19,22-23H,2-5,7,9-10,12-13,15-18H2,1H3,(H,21,24)/b8-6-,14-11+/t19-/m0/s1" X4X InChIKey InChI 1.06 VYCHZJQSKAOAAT-HGKNAVPSSA-N X4X SMILES_CANONICAL CACTVS 3.385 "CCCCC\C=C/C=C/[C@H](O)CCCCCCCC(=O)NCCO" X4X SMILES CACTVS 3.385 "CCCCCC=CC=C[CH](O)CCCCCCCC(=O)NCCO" X4X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCC/C=C\C=C\[C@@H](CCCCCCCC(=O)NCCO)O" X4X SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCC=CC=CC(CCCCCCCC(=O)NCCO)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X4X "SYSTEMATIC NAME" ACDLabs 12.01 "(9R,10E,12Z)-9-hydroxy-N-(2-hydroxyethyl)octadeca-10,12-dienamide" X4X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(9~{R},10~{E},12~{Z})-~{N}-(2-hydroxyethyl)-9-oxidanyl-octadeca-10,12-dienamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X4X "Create component" 2022-10-27 RCSB X4X "Initial release" 2024-05-29 RCSB #