data_X50 # _chem_comp.id X50 _chem_comp.name "(3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidine-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H30 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-31 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X50 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P73 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X50 C10 C1 C 0 1 N N N N N N 158.842 138.888 122.997 3.327 1.648 -0.072 C10 X50 1 X50 C13 C2 C 0 1 Y N N N N N 158.226 141.681 125.558 6.816 2.399 1.159 C13 X50 2 X50 C15 C3 C 0 1 Y N N N N N 160.535 141.320 125.391 6.859 2.301 -1.233 C15 X50 3 X50 C17 C4 C 0 1 Y N N N N N 157.569 137.468 125.432 0.762 0.512 -0.066 C17 X50 4 X50 C20 C5 C 0 1 N N N N N N 156.768 135.948 128.927 -2.983 0.219 -0.121 C20 X50 5 X50 C21 C6 C 0 1 N N R N N N 156.095 136.941 129.920 -4.016 1.345 -0.192 C21 X50 6 X50 C24 C7 C 0 1 N N N N N N 154.390 138.778 129.937 -4.852 3.421 0.915 C24 X50 7 X50 C26 C8 C 0 1 N N N N N N 156.485 139.058 131.240 -6.450 1.892 -0.075 C26 X50 8 X50 C01 C9 C 0 1 N N N N N N 150.978 136.777 125.614 -0.549 -5.474 -1.061 C01 X50 9 X50 C02 C10 C 0 1 N N N N N N 152.415 136.262 125.967 -0.668 -4.538 0.142 C02 X50 10 X50 C03 C11 C 0 1 N N N N N N 152.482 134.738 126.079 -0.620 -5.358 1.433 C03 X50 11 X50 C04 C12 C 0 1 Y N N N N N 153.470 136.800 124.992 0.474 -3.555 0.129 C04 X50 12 X50 C05 C13 C 0 1 Y N N N N N 153.297 137.219 123.674 1.827 -3.868 0.176 C05 X50 13 X50 C08 C14 C 0 1 Y N N N N N 156.830 137.723 124.249 1.844 -0.317 -0.002 C08 X50 14 X50 C11 C15 C 0 1 Y N N N N N 159.050 139.984 124.035 4.804 1.948 -0.058 C11 X50 15 X50 C12 C16 C 0 1 Y N N N N N 157.994 140.664 124.584 5.460 2.130 1.145 C12 X50 16 X50 C14 C17 C 0 1 Y N N N N N 159.495 141.985 125.934 7.515 2.487 -0.031 C14 X50 17 X50 C16 C18 C 0 1 Y N N N N N 160.300 140.291 124.410 5.505 2.025 -1.247 C16 X50 18 X50 C18 C19 C 0 1 Y N N N N N 156.872 136.945 126.560 -0.529 -0.039 -0.064 C18 X50 19 X50 C23 C20 C 0 1 N N N N N N 154.789 137.399 129.394 -3.779 2.330 0.955 C23 X50 20 X50 C27 C21 C 0 1 N N R N N N 157.046 138.095 130.181 -5.424 0.756 -0.065 C27 X50 21 X50 C30 C22 C 0 1 Y N N N N N 154.866 136.975 125.299 0.366 -2.173 0.062 C30 X50 22 X50 N06 N1 N 0 1 Y N N N N N 154.490 137.612 123.213 2.523 -2.757 0.134 N06 X50 23 X50 N07 N2 N 0 1 Y N N N N N 155.456 137.456 124.244 1.641 -1.673 0.062 N07 X50 24 X50 N09 N3 N 0 1 N N N N N N 157.462 138.276 123.026 3.122 0.199 -0.003 N09 X50 25 X50 N19 N4 N 0 1 N N N N N N 157.556 136.644 127.855 -1.635 0.792 -0.123 N19 X50 26 X50 N25 N5 N 0 1 N N N N N N 155.009 139.037 131.293 -6.180 2.807 1.041 N25 X50 27 X50 N29 N6 N 0 1 Y N N N N N 155.558 136.710 126.479 -0.691 -1.350 -0.007 N29 X50 28 X50 O22 O1 O 0 1 N N N N N N 155.856 136.260 131.153 -3.895 2.026 -1.442 O22 X50 29 X50 O28 O2 O 0 1 N N N N N N 158.267 137.592 130.625 -5.675 -0.123 -1.163 O28 X50 30 X50 H1 H1 H 0 1 N N N N N N 159.578 138.092 123.181 2.851 2.124 0.786 H1 X50 31 X50 H2 H2 H 0 1 N N N N N N 159.009 139.319 121.999 2.887 2.034 -0.992 H2 X50 32 X50 H3 H3 H 0 1 N N N N N N 157.392 142.209 125.996 7.328 2.544 2.098 H3 X50 33 X50 H4 H4 H 0 1 N N N N N N 161.544 141.559 125.692 7.406 2.370 -2.162 H4 X50 34 X50 H5 H5 H 0 1 N N N N N N 158.630 137.664 125.477 0.898 1.583 -0.113 H5 X50 35 X50 H6 H6 H 0 1 N N N N N N 155.984 135.342 128.450 -3.133 -0.355 0.794 H6 X50 36 X50 H7 H7 H 0 1 N N N N N N 157.446 135.291 129.492 -3.100 -0.437 -0.984 H7 X50 37 X50 H8 H8 H 0 1 N N N N N N 154.731 139.552 129.234 -4.694 4.116 1.739 H8 X50 38 X50 H9 H9 H 0 1 N N N N N N 153.295 138.823 130.029 -4.788 3.958 -0.031 H9 X50 39 X50 H10 H10 H 0 1 N N N N N N 156.878 138.768 132.225 -6.379 2.437 -1.017 H10 X50 40 X50 H11 H11 H 0 1 N N N N N N 156.816 140.079 131.000 -7.452 1.477 0.030 H11 X50 41 X50 H12 H12 H 0 1 N N N N N N 150.254 136.369 126.335 -1.376 -6.185 -1.052 H12 X50 42 X50 H13 H13 H 0 1 N N N N N N 150.961 137.876 125.659 -0.583 -4.890 -1.981 H13 X50 43 X50 H14 H14 H 0 1 N N N N N N 150.710 136.448 124.599 0.396 -6.015 -1.009 H14 X50 44 X50 H15 H15 H 0 1 N N N N N N 152.659 136.668 126.960 -1.613 -3.997 0.090 H15 X50 45 X50 H16 H16 H 0 1 N N N N N N 151.714 134.388 126.784 0.325 -5.898 1.485 H16 X50 46 X50 H17 H17 H 0 1 N N N N N N 152.304 134.290 125.090 -0.705 -4.690 2.291 H17 X50 47 X50 H18 H18 H 0 1 N N N N N N 153.477 134.441 126.443 -1.446 -6.069 1.443 H18 X50 48 X50 H19 H19 H 0 1 N N N N N N 152.368 137.225 123.124 2.238 -4.865 0.232 H19 X50 49 X50 H20 H20 H 0 1 N N N N N N 156.985 140.430 124.279 4.914 2.061 2.074 H20 X50 50 X50 H21 H21 H 0 1 N N N N N N 159.671 142.758 126.667 8.574 2.701 -0.020 H21 X50 51 X50 H22 H22 H 0 1 N N N N N N 161.136 139.764 123.974 4.995 1.870 -2.186 H22 X50 52 X50 H23 H23 H 0 1 N N N N N N 154.850 137.456 128.297 -3.832 1.801 1.907 H23 X50 53 X50 H24 H24 H 0 1 N N N N N N 154.017 136.670 129.681 -2.794 2.785 0.846 H24 X50 54 X50 H25 H25 H 0 1 N N N N N N 157.183 138.654 129.244 -5.504 0.202 0.870 H25 X50 55 X50 H26 H26 H 0 1 N N N N N N 156.842 138.988 122.698 3.886 -0.397 0.043 H26 X50 56 X50 H27 H27 H 0 1 N N N N N N 158.346 136.068 127.646 -1.517 1.754 -0.165 H27 X50 57 X50 H28 H28 H 0 1 N N N N N N 154.687 139.922 131.630 -6.277 2.335 1.927 H28 X50 58 X50 H30 H30 H 0 1 N N N N N N 155.445 136.855 131.769 -3.027 2.427 -1.589 H30 X50 59 X50 H31 H31 H 0 1 N N N N N N 158.865 138.311 130.790 -6.551 -0.533 -1.147 H31 X50 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X50 C10 N09 SING N N 1 X50 C10 C11 SING N N 2 X50 N09 C08 SING N N 3 X50 N06 C05 DOUB Y N 4 X50 N06 N07 SING Y N 5 X50 C05 C04 SING Y N 6 X50 C11 C16 DOUB Y N 7 X50 C11 C12 SING Y N 8 X50 N07 C08 SING Y N 9 X50 N07 C30 SING Y N 10 X50 C08 C17 DOUB Y N 11 X50 C16 C15 SING Y N 12 X50 C12 C13 DOUB Y N 13 X50 C04 C30 DOUB Y N 14 X50 C04 C02 SING N N 15 X50 C30 N29 SING Y N 16 X50 C15 C14 DOUB Y N 17 X50 C17 C18 SING Y N 18 X50 C13 C14 SING Y N 19 X50 C01 C02 SING N N 20 X50 C02 C03 SING N N 21 X50 N29 C18 DOUB Y N 22 X50 C18 N19 SING N N 23 X50 N19 C20 SING N N 24 X50 C20 C21 SING N N 25 X50 C23 C21 SING N N 26 X50 C23 C24 SING N N 27 X50 C21 C27 SING N N 28 X50 C21 O22 SING N N 29 X50 C24 N25 SING N N 30 X50 C27 O28 SING N N 31 X50 C27 C26 SING N N 32 X50 C26 N25 SING N N 33 X50 C10 H1 SING N N 34 X50 C10 H2 SING N N 35 X50 C13 H3 SING N N 36 X50 C15 H4 SING N N 37 X50 C17 H5 SING N N 38 X50 C20 H6 SING N N 39 X50 C20 H7 SING N N 40 X50 C24 H8 SING N N 41 X50 C24 H9 SING N N 42 X50 C26 H10 SING N N 43 X50 C26 H11 SING N N 44 X50 C01 H12 SING N N 45 X50 C01 H13 SING N N 46 X50 C01 H14 SING N N 47 X50 C02 H15 SING N N 48 X50 C03 H16 SING N N 49 X50 C03 H17 SING N N 50 X50 C03 H18 SING N N 51 X50 C05 H19 SING N N 52 X50 C12 H20 SING N N 53 X50 C14 H21 SING N N 54 X50 C16 H22 SING N N 55 X50 C23 H23 SING N N 56 X50 C23 H24 SING N N 57 X50 C27 H25 SING N N 58 X50 N09 H26 SING N N 59 X50 N19 H27 SING N N 60 X50 N25 H28 SING N N 61 X50 O22 H30 SING N N 62 X50 O28 H31 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X50 InChI InChI 1.06 "InChI=1S/C22H30N6O2/c1-15(2)17-12-26-28-20(24-11-16-6-4-3-5-7-16)10-19(27-21(17)28)25-14-22(30)8-9-23-13-18(22)29/h3-7,10,12,15,18,23-24,29-30H,8-9,11,13-14H2,1-2H3,(H,25,27)/t18-,22-/m1/s1" X50 InChIKey InChI 1.06 OVDMCYNLHNMECD-XMSQKQJNSA-N X50 SMILES_CANONICAL CACTVS 3.385 "CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C@]4(O)CCNC[C@H]4O)nc12" X50 SMILES CACTVS 3.385 "CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C]4(O)CCNC[CH]4O)nc12" X50 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1cnn2c1nc(cc2NCc3ccccc3)NC[C@@]4(CCNC[C@H]4O)O" X50 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)c1cnn2c1nc(cc2NCc3ccccc3)NCC4(CCNCC4O)O" # _pdbx_chem_comp_identifier.comp_id X50 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},4~{R})-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidine-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X50 "Create component" 2023-05-31 PDBE X50 "Initial release" 2024-03-20 RCSB #