data_X58 # _chem_comp.id X58 _chem_comp.name "(3S,4S)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidine-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H30 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-31 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X58 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P73 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X58 C01 C1 C 0 1 N N N N N N 152.509 134.728 126.098 0.600 5.357 -1.447 C01 X58 1 X58 C02 C2 C 0 1 N N N N N N 152.424 136.245 125.973 0.669 4.536 -0.157 C02 X58 2 X58 C03 C3 C 0 1 N N N N N N 151.022 136.736 125.632 0.572 5.472 1.049 C03 X58 3 X58 C04 C4 C 0 1 Y N N N N N 153.480 136.800 125.013 -0.475 3.555 -0.125 C04 X58 4 X58 C05 C5 C 0 1 Y N N N N N 153.292 137.254 123.713 -1.827 3.870 -0.160 C05 X58 5 X58 C08 C6 C 0 1 Y N N N N N 156.766 137.738 124.235 -1.846 0.318 0.009 C08 X58 6 X58 C10 C7 C 0 1 N N N N N N 158.775 138.651 122.942 -3.331 -1.647 0.075 C10 X58 7 X58 C11 C8 C 0 1 Y N N N N N 159.197 139.894 123.744 -4.808 -1.946 0.060 C11 X58 8 X58 C12 C9 C 0 1 Y N N N N N 160.453 140.431 123.523 -5.509 -2.020 1.249 C12 X58 9 X58 C13 C10 C 0 1 Y N N N N N 160.873 141.547 124.229 -6.864 -2.295 1.236 C13 X58 10 X58 C14 C11 C 0 1 Y N N N N N 160.035 142.130 125.171 -7.517 -2.494 0.034 C14 X58 11 X58 C15 C12 C 0 1 Y N N N N N 158.778 141.600 125.400 -6.816 -2.419 -1.155 C15 X58 12 X58 C16 C13 C 0 1 Y N N N N N 158.359 140.487 124.686 -5.462 -2.140 -1.142 C16 X58 13 X58 C17 C14 C 0 1 Y N N N N N 157.519 137.462 125.378 -0.766 -0.512 0.069 C17 X58 14 X58 C18 C15 C 0 1 Y N N N N N 156.856 136.920 126.488 0.526 0.038 0.048 C18 X58 15 X58 C20 C16 C 0 1 N N N N N N 156.789 136.045 128.837 2.981 -0.223 0.086 C20 X58 16 X58 C21 C17 C 0 1 N N S N N N 156.439 137.105 129.898 4.013 -1.349 0.163 C21 X58 17 X58 C23 C18 C 0 1 N N N N N N 157.702 137.691 130.404 3.838 -2.288 -1.033 C23 X58 18 X58 C24 C19 C 0 1 N N N N N N 157.458 138.938 131.266 4.911 -3.377 -0.983 C24 X58 19 X58 C26 C20 C 0 1 N N N N N N 155.184 139.241 130.364 6.451 -1.887 0.148 C26 X58 20 X58 C27 C21 C 0 1 N N S N N N 155.508 138.147 129.338 5.424 -0.753 0.132 C27 X58 21 X58 C30 C22 C 0 1 Y N N N N N 154.862 136.968 125.306 -0.367 2.172 -0.060 C30 X58 22 X58 N06 N1 N 0 1 Y N N N N N 154.469 137.654 123.250 -2.524 2.759 -0.120 N06 X58 23 X58 N07 N2 N 0 1 Y N N N N N 155.435 137.475 124.253 -1.643 1.674 -0.052 N07 X58 24 X58 N09 N3 N 0 1 N N N N N N 157.366 138.315 123.038 -3.125 -0.198 0.009 N09 X58 25 X58 N19 N4 N 0 1 N N N N N N 157.566 136.606 127.725 1.632 -0.794 0.108 N19 X58 26 X58 N25 N5 N 0 1 N N N N N N 156.005 139.111 131.592 6.242 -2.757 -1.016 N25 X58 27 X58 N29 N6 N 0 1 Y N N N N N 155.557 136.687 126.435 0.690 1.348 -0.010 N29 X58 28 X58 O22 O1 O 0 1 N N N N N N 155.757 136.447 130.991 3.830 -2.082 1.376 O22 X58 29 X58 O28 O2 O 0 1 N N N N N N 154.291 137.512 128.959 5.615 0.081 1.276 O28 X58 30 X58 H1 H1 H 0 1 N N N N N N 151.735 134.373 126.795 -0.345 5.899 -1.482 H1 X58 31 X58 H2 H2 H 0 1 N N N N N N 152.351 134.269 125.111 1.427 6.066 -1.470 H2 X58 32 X58 H3 H3 H 0 1 N N N N N N 153.502 134.447 126.479 0.669 4.690 -2.306 H3 X58 33 X58 H4 H4 H 0 1 N N N N N N 152.663 136.653 126.966 1.614 3.994 -0.122 H4 X58 34 X58 H5 H5 H 0 1 N N N N N N 150.301 136.312 126.346 -0.373 6.014 1.013 H5 X58 35 X58 H6 H6 H 0 1 N N N N N N 150.994 137.834 125.690 0.621 4.887 1.967 H6 X58 36 X58 H7 H7 H 0 1 N N N N N N 150.759 136.416 124.613 1.399 6.181 1.025 H7 X58 37 X58 H8 H8 H 0 1 N N N N N N 152.355 137.277 123.176 -2.238 4.867 -0.212 H8 X58 38 X58 H9 H9 H 0 1 N N N N N N 159.357 137.793 123.309 -2.890 -2.035 0.993 H9 X58 39 X58 H10 H10 H 0 1 N N N N N N 159.013 138.830 121.883 -2.856 -2.120 -0.785 H10 X58 40 X58 H11 H11 H 0 1 N N N N N N 161.110 139.977 122.796 -4.999 -1.864 2.188 H11 X58 41 X58 H12 H12 H 0 1 N N N N N N 161.853 141.964 124.047 -7.412 -2.353 2.165 H12 X58 42 X58 H13 H13 H 0 1 N N N N N N 160.365 142.997 125.724 -8.576 -2.709 0.024 H13 X58 43 X58 H14 H14 H 0 1 N N N N N N 158.125 142.051 126.132 -7.326 -2.575 -2.094 H14 X58 44 X58 H15 H15 H 0 1 N N N N N N 157.375 140.077 124.862 -4.915 -2.078 -2.071 H15 X58 45 X58 H16 H16 H 0 1 N N N N N N 158.580 137.660 125.406 -0.902 -1.582 0.118 H16 X58 46 X58 H17 H17 H 0 1 N N N N N N 155.855 135.622 128.438 3.107 0.445 0.938 H17 X58 47 X58 H18 H18 H 0 1 N N N N N N 157.378 135.248 129.314 3.123 0.337 -0.839 H18 X58 48 X58 H19 H19 H 0 1 N N N N N N 158.224 136.937 131.011 2.850 -2.748 -0.993 H19 X58 49 X58 H20 H20 H 0 1 N N N N N N 158.331 137.971 129.546 3.938 -1.721 -1.959 H20 X58 50 X58 H21 H21 H 0 1 N N N N N N 158.024 138.840 132.204 4.802 -3.953 -0.064 H21 X58 51 X58 H22 H22 H 0 1 N N N N N N 157.808 139.825 130.717 4.798 -4.039 -1.842 H22 X58 52 X58 H23 H23 H 0 1 N N N N N N 155.378 140.223 129.909 7.457 -1.467 0.112 H23 X58 53 X58 H24 H24 H 0 1 N N N N N N 154.121 139.168 130.638 6.335 -2.470 1.062 H24 X58 54 X58 H25 H25 H 0 1 N N N N N N 155.980 138.615 128.462 5.549 -0.162 -0.775 H25 X58 55 X58 H26 H26 H 0 1 N N N N N N 156.868 139.164 122.862 -3.889 0.399 -0.034 H26 X58 56 X58 H27 H27 H 0 1 N N N N N N 158.282 135.946 127.498 1.514 -1.755 0.166 H27 X58 57 X58 H28 H28 H 0 1 N N N N N N 155.892 139.935 132.147 6.383 -2.249 -1.877 H28 X58 58 X58 H30 H30 H 0 1 N N N N N N 155.533 137.087 131.656 2.957 -2.489 1.462 H30 X58 59 X58 H31 H31 H 0 1 N N N N N N 153.693 138.159 128.603 6.489 0.492 1.321 H31 X58 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X58 C10 N09 SING N N 1 X58 C10 C11 SING N N 2 X58 N09 C08 SING N N 3 X58 N06 C05 DOUB Y N 4 X58 N06 N07 SING Y N 5 X58 C12 C11 DOUB Y N 6 X58 C12 C13 SING Y N 7 X58 C05 C04 SING Y N 8 X58 C11 C16 SING Y N 9 X58 C13 C14 DOUB Y N 10 X58 C08 N07 SING Y N 11 X58 C08 C17 DOUB Y N 12 X58 N07 C30 SING Y N 13 X58 C16 C15 DOUB Y N 14 X58 C04 C30 DOUB Y N 15 X58 C04 C02 SING N N 16 X58 C14 C15 SING Y N 17 X58 C30 N29 SING Y N 18 X58 C17 C18 SING Y N 19 X58 C03 C02 SING N N 20 X58 C02 C01 SING N N 21 X58 N29 C18 DOUB Y N 22 X58 C18 N19 SING N N 23 X58 N19 C20 SING N N 24 X58 C20 C21 SING N N 25 X58 O28 C27 SING N N 26 X58 C27 C21 SING N N 27 X58 C27 C26 SING N N 28 X58 C21 C23 SING N N 29 X58 C21 O22 SING N N 30 X58 C26 N25 SING N N 31 X58 C23 C24 SING N N 32 X58 C24 N25 SING N N 33 X58 C01 H1 SING N N 34 X58 C01 H2 SING N N 35 X58 C01 H3 SING N N 36 X58 C02 H4 SING N N 37 X58 C03 H5 SING N N 38 X58 C03 H6 SING N N 39 X58 C03 H7 SING N N 40 X58 C05 H8 SING N N 41 X58 C10 H9 SING N N 42 X58 C10 H10 SING N N 43 X58 C12 H11 SING N N 44 X58 C13 H12 SING N N 45 X58 C14 H13 SING N N 46 X58 C15 H14 SING N N 47 X58 C16 H15 SING N N 48 X58 C17 H16 SING N N 49 X58 C20 H17 SING N N 50 X58 C20 H18 SING N N 51 X58 C23 H19 SING N N 52 X58 C23 H20 SING N N 53 X58 C24 H21 SING N N 54 X58 C24 H22 SING N N 55 X58 C26 H23 SING N N 56 X58 C26 H24 SING N N 57 X58 C27 H25 SING N N 58 X58 N09 H26 SING N N 59 X58 N19 H27 SING N N 60 X58 N25 H28 SING N N 61 X58 O22 H30 SING N N 62 X58 O28 H31 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X58 InChI InChI 1.06 "InChI=1S/C22H30N6O2/c1-15(2)17-12-26-28-20(24-11-16-6-4-3-5-7-16)10-19(27-21(17)28)25-14-22(30)8-9-23-13-18(22)29/h3-7,10,12,15,18,23-24,29-30H,8-9,11,13-14H2,1-2H3,(H,25,27)/t18-,22-/m0/s1" X58 InChIKey InChI 1.06 OVDMCYNLHNMECD-AVRDEDQJSA-N X58 SMILES_CANONICAL CACTVS 3.385 "CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C@@]4(O)CCNC[C@@H]4O)nc12" X58 SMILES CACTVS 3.385 "CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C]4(O)CCNC[CH]4O)nc12" X58 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1cnn2c1nc(cc2NCc3ccccc3)NC[C@]4(CCNC[C@@H]4O)O" X58 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)c1cnn2c1nc(cc2NCc3ccccc3)NCC4(CCNCC4O)O" # _pdbx_chem_comp_identifier.comp_id X58 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},4~{S})-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidine-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X58 "Create component" 2023-05-31 PDBE X58 "Initial release" 2024-03-20 RCSB #