data_X63 # _chem_comp.id X63 _chem_comp.name "2-{[(2-aminopyrimidin-5-yl)methyl]amino}-4-[(2-hydroxyethyl)amino]-5-nitrobenzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H17 N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-03-02 _chem_comp.pdbx_modified_date 2012-08-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 347.329 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X63 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3QX2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X63 N01 N01 N 0 1 N N N 77.391 29.944 64.332 -1.243 -0.387 -0.034 N01 X63 1 X63 N02 N02 N 0 1 N N N 80.569 32.628 64.278 0.326 -4.253 -0.382 N02 X63 2 X63 N03 N03 N 0 1 Y N N 75.744 25.592 65.389 -5.289 0.985 -1.130 N03 X63 3 X63 N04 N04 N 0 1 Y N N 76.182 27.021 67.301 -5.395 0.532 1.136 N04 X63 4 X63 N05 N05 N 0 1 N N N 80.024 26.638 62.173 3.198 1.450 0.200 N05 X63 5 X63 N06 N06 N 0 1 N N N 75.913 24.788 67.495 -7.367 0.654 -0.112 N06 X63 6 X63 N07 N07 N 1 1 N N N 82.256 28.215 62.449 4.359 -1.121 0.076 N07 X63 7 X63 C08 C08 C 0 1 Y N N 80.997 29.908 63.527 2.072 -2.023 -0.056 C08 X63 8 X63 C09 C09 C 0 1 Y N N 79.735 30.387 64.029 0.683 -1.856 -0.080 C09 X63 9 X63 C10 C10 C 0 1 Y N N 78.560 29.545 63.884 0.135 -0.563 -0.010 C10 X63 10 X63 C11 C11 C 0 1 Y N N 78.705 28.267 63.238 0.977 0.534 0.081 C11 X63 11 X63 C12 C12 C 0 1 Y N N 79.947 27.803 62.746 2.353 0.349 0.103 C12 X63 12 X63 C13 C13 C 0 1 Y N N 81.114 28.619 62.886 2.891 -0.935 0.040 C13 X63 13 X63 C14 C14 C 0 1 N N N 79.678 31.648 64.636 -0.200 -3.029 -0.178 C14 X63 14 X63 C15 C15 C 0 1 N N N 76.095 29.199 64.145 -1.815 0.941 0.205 C15 X63 15 X63 C16 C16 C 0 1 Y N N 76.030 28.002 65.071 -3.318 0.863 0.119 C16 X63 16 X63 C17 C17 C 0 1 Y N N 75.792 26.705 64.594 -3.969 1.060 -1.089 C17 X63 17 X63 C18 C18 C 0 1 Y N N 75.945 25.806 66.726 -5.987 0.725 -0.034 C18 X63 18 X63 C19 C19 C 0 1 Y N N 76.220 28.098 66.457 -4.078 0.593 1.246 C19 X63 19 X63 C20 C20 C 0 1 N N N 78.968 26.131 61.266 2.635 2.796 0.336 C20 X63 20 X63 C21 C21 C 0 1 N N N 78.722 24.659 61.559 3.771 3.817 0.422 C21 X63 21 X63 O22 O22 O 0 1 N N N 78.844 31.913 65.489 -1.404 -2.893 -0.075 O22 X63 22 X63 O23 O23 O 0 1 N N N 79.892 23.926 61.283 4.493 3.832 -0.811 O23 X63 23 X63 O24 O24 O 0 1 N N N 82.352 27.186 61.635 4.840 -2.052 0.697 O24 X63 24 X63 O25 O25 O -1 1 N N N 83.361 28.824 62.807 5.086 -0.342 -0.514 O25 X63 25 X63 HN01 HN01 H 0 0 N N N 77.507 30.002 65.323 -1.825 -1.141 -0.212 HN01 X63 26 X63 H102 H102 H 0 0 N N N 80.524 33.528 64.712 1.286 -4.361 -0.464 H102 X63 27 X63 H202 H202 H 0 0 N N N 81.264 32.443 63.583 -0.256 -5.026 -0.447 H202 X63 28 X63 HN05 HN05 H 0 0 N N N 80.857 26.668 61.620 4.160 1.326 0.177 HN05 X63 29 X63 H106 H106 H 0 0 N N N 75.736 23.966 66.954 -7.812 0.794 -0.963 H106 X63 30 X63 H206 H206 H 0 0 N N N 76.792 24.696 67.963 -7.889 0.465 0.683 H206 X63 31 X63 H08 H08 H 0 1 N N N 81.876 30.527 63.632 2.497 -3.014 -0.109 H08 X63 32 X63 H11 H11 H 0 1 N N N 77.833 27.639 63.125 0.564 1.530 0.134 H11 X63 33 X63 H115 H115 H 0 0 N N N 75.256 29.874 64.370 -1.525 1.289 1.196 H115 X63 34 X63 H215 H215 H 0 0 N N N 76.026 28.852 63.103 -1.444 1.637 -0.547 H215 X63 35 X63 H17 H17 H 0 1 N N N 75.637 26.576 63.533 -3.405 1.272 -1.985 H17 X63 36 X63 H19 H19 H 0 1 N N N 76.406 29.074 66.881 -3.601 0.435 2.202 H19 X63 37 X63 H120 H120 H 0 0 N N N 79.291 26.250 60.221 2.012 3.018 -0.530 H120 X63 38 X63 H220 H220 H 0 0 N N N 78.040 26.699 61.427 2.031 2.847 1.242 H220 X63 39 X63 H121 H121 H 0 0 N N N 78.452 24.535 62.618 3.356 4.807 0.613 H121 X63 40 X63 H221 H221 H 0 0 N N N 77.900 24.291 60.927 4.445 3.543 1.234 H221 X63 41 X63 HO23 HO23 H 0 0 N N N 79.740 23.006 61.465 5.229 4.458 -0.828 HO23 X63 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X63 N01 HN01 SING N N 1 X63 N02 C14 SING N N 2 X63 N02 H102 SING N N 3 X63 N02 H202 SING N N 4 X63 N03 C18 DOUB Y N 5 X63 N05 C12 SING N N 6 X63 N05 HN05 SING N N 7 X63 N06 H106 SING N N 8 X63 N06 H206 SING N N 9 X63 N07 O25 SING N N 10 X63 N07 C13 SING N N 11 X63 C08 C09 DOUB Y N 12 X63 C08 H08 SING N N 13 X63 C09 C14 SING N N 14 X63 C10 C09 SING Y N 15 X63 C10 N01 SING N N 16 X63 C11 C10 DOUB Y N 17 X63 C11 H11 SING N N 18 X63 C12 C13 DOUB Y N 19 X63 C12 C11 SING Y N 20 X63 C13 C08 SING Y N 21 X63 C14 O22 DOUB N N 22 X63 C15 N01 SING N N 23 X63 C15 C16 SING N N 24 X63 C15 H115 SING N N 25 X63 C15 H215 SING N N 26 X63 C16 C19 SING Y N 27 X63 C17 C16 DOUB Y N 28 X63 C17 N03 SING Y N 29 X63 C17 H17 SING N N 30 X63 C18 N04 SING Y N 31 X63 C18 N06 SING N N 32 X63 C19 N04 DOUB Y N 33 X63 C19 H19 SING N N 34 X63 C20 C21 SING N N 35 X63 C20 N05 SING N N 36 X63 C20 H120 SING N N 37 X63 C20 H220 SING N N 38 X63 C21 H121 SING N N 39 X63 C21 H221 SING N N 40 X63 O23 C21 SING N N 41 X63 O23 HO23 SING N N 42 X63 O24 N07 DOUB N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X63 SMILES ACDLabs 12.01 "[O-][N+](=O)c2c(NCCO)cc(NCc1cnc(nc1)N)c(C(=O)N)c2" X63 SMILES_CANONICAL CACTVS 3.370 "NC(=O)c1cc(c(NCCO)cc1NCc2cnc(N)nc2)[N+]([O-])=O" X63 SMILES CACTVS 3.370 "NC(=O)c1cc(c(NCCO)cc1NCc2cnc(N)nc2)[N+]([O-])=O" X63 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1c(c(cc(c1[N+](=O)[O-])NCCO)NCc2cnc(nc2)N)C(=O)N" X63 SMILES "OpenEye OEToolkits" 1.7.0 "c1c(c(cc(c1[N+](=O)[O-])NCCO)NCc2cnc(nc2)N)C(=O)N" X63 InChI InChI 1.03 "InChI=1S/C14H17N7O4/c15-13(23)9-3-12(21(24)25)11(17-1-2-22)4-10(9)18-5-8-6-19-14(16)20-7-8/h3-4,6-7,17-18,22H,1-2,5H2,(H2,15,23)(H2,16,19,20)" X63 InChIKey InChI 1.03 STRAQIMXXYJKPS-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X63 "SYSTEMATIC NAME" ACDLabs 12.01 "2-{[(2-aminopyrimidin-5-yl)methyl]amino}-4-[(2-hydroxyethyl)amino]-5-nitrobenzamide" X63 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2-[(2-azanylpyrimidin-5-yl)methylamino]-4-(2-hydroxyethylamino)-5-nitro-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X63 "Create component" 2011-03-02 RCSB X63 "Modify descriptor" 2011-06-04 RCSB #