data_X6L # _chem_comp.id X6L _chem_comp.name "2-amino-8-[2-oxo-2-(4-phenylphenyl)ethyl]sulfanyl-1,9-dihydropurin-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H15 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-04-02 _chem_comp.pdbx_modified_date 2015-01-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 377.420 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X6L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4CWB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X6L C22 C22 C 0 1 Y N N 49.374 -16.294 -24.344 8.367 -2.020 -0.002 C22 X6L 1 X6L C21 C21 C 0 1 Y N N 49.591 -15.183 -23.565 7.191 -2.749 -0.002 C21 X6L 2 X6L C23 C23 C 0 1 Y N N 48.098 -16.549 -24.774 8.330 -0.637 -0.000 C23 X6L 3 X6L C20 C20 C 0 1 Y N N 48.542 -14.359 -23.223 5.973 -2.099 -0.001 C20 X6L 4 X6L C24 C24 C 0 1 Y N N 47.054 -15.723 -24.433 7.119 0.024 0.001 C24 X6L 5 X6L C15 C15 C 0 1 Y N N 45.003 -13.653 -24.090 4.587 1.394 0.002 C15 X6L 6 X6L C17 C17 C 0 1 Y N N 46.016 -13.221 -22.001 3.438 -0.735 -0.000 C17 X6L 7 X6L C14 C14 C 0 1 Y N N 43.878 -12.974 -23.672 3.381 2.047 0.002 C14 X6L 8 X6L C18 C18 C 0 1 Y N N 44.898 -12.554 -21.574 2.230 -0.086 -0.000 C18 X6L 9 X6L C19 C19 C 0 1 Y N N 47.257 -14.598 -23.649 5.930 -0.705 0.001 C19 X6L 10 X6L C16 C16 C 0 1 Y N N 46.096 -13.796 -23.266 4.626 -0.001 0.001 C16 X6L 11 X6L C13 C13 C 0 1 Y N N 43.815 -12.427 -22.414 2.189 1.314 0.001 C13 X6L 12 X6L C5 C5 C 0 1 Y N N 42.966 -7.765 -20.736 -4.219 -0.682 -0.004 C5 X6L 13 X6L C4 C4 C 0 1 Y N N 44.161 -7.754 -21.374 -5.165 0.347 -0.004 C4 X6L 14 X6L C7 C7 C 0 1 Y N N 42.684 -8.900 -22.490 -3.124 1.198 -0.002 C7 X6L 15 X6L C25 C25 C 0 1 N N N 42.847 -7.036 -19.505 -4.674 -2.020 -0.001 C25 X6L 16 X6L C2 C2 C 0 1 N N N 45.188 -6.485 -19.927 -6.881 -1.199 0.003 C2 X6L 17 X6L C11 C11 C 0 1 N N N 42.604 -11.739 -21.933 0.895 2.011 0.001 C11 X6L 18 X6L C10 C10 C 0 1 N N N 41.526 -11.260 -22.851 -0.388 1.221 -0.000 C10 X6L 19 X6L N6 N6 N 0 1 Y N N 42.026 -8.492 -21.431 -2.989 -0.104 -0.003 N6 X6L 20 X6L N3 N3 N 0 1 N N N 45.302 -7.151 -21.040 -6.469 0.049 -0.000 N3 X6L 21 X6L N8 N8 N 0 1 Y N N 43.987 -8.510 -22.501 -4.455 1.522 -0.007 N8 X6L 22 X6L N27 N27 N 0 1 N N N 44.042 -6.413 -19.177 -6.007 -2.245 0.003 N27 X6L 23 X6L N1 N1 N 0 1 N N N 46.212 -5.779 -19.408 -8.230 -1.457 0.006 N1 X6L 24 X6L O26 O26 O 0 1 N N N 41.845 -6.952 -18.826 -3.884 -2.949 -0.001 O26 X6L 25 X6L O12 O12 O 0 1 N N N 42.436 -11.576 -20.747 0.860 3.224 0.003 O12 X6L 26 X6L S9 S9 S 0 1 N N N 42.055 -9.856 -23.812 -1.797 2.357 0.000 S9 X6L 27 X6L H22 H22 H 0 1 N N N 50.189 -16.950 -24.611 9.317 -2.533 0.002 H22 X6L 28 X6L H21 H21 H 0 1 N N N 50.589 -14.955 -23.219 7.226 -3.828 -0.002 H21 X6L 29 X6L H23 H23 H 0 1 N N N 47.910 -17.415 -25.392 9.251 -0.073 0.000 H23 X6L 30 X6L H20 H20 H 0 1 N N N 48.735 -13.498 -22.600 5.056 -2.669 -0.001 H20 X6L 31 X6L H24 H24 H 0 1 N N N 46.058 -15.954 -24.782 7.091 1.103 0.002 H24 X6L 32 X6L H15 H15 H 0 1 N N N 45.027 -14.080 -25.082 5.507 1.959 -0.001 H15 X6L 33 X6L H14 H14 H 0 1 N N N 43.037 -12.871 -24.342 3.352 3.127 0.004 H14 X6L 34 X6L H17 H17 H 0 1 N N N 46.862 -13.303 -21.335 3.471 -1.814 -0.001 H17 X6L 35 X6L H18 H18 H 0 1 N N N 44.867 -12.129 -20.582 1.312 -0.654 -0.001 H18 X6L 36 X6L H8 H8 H 0 1 N N N 44.676 -8.731 -23.191 -4.827 2.417 -0.008 H8 X6L 37 X6L H27 H27 H 0 1 N N N 44.070 -5.874 -18.335 -6.343 -3.155 0.006 H27 X6L 38 X6L H11N H11N H 0 0 N N N 47.093 -5.756 -19.880 -8.864 -0.723 0.007 H11N X6L 39 X6L H12N H12N H 0 0 N N N 46.091 -5.278 -18.551 -8.549 -2.373 0.009 H12N X6L 40 X6L H101 H101 H 0 0 N N N 41.251 -12.077 -23.535 -0.427 0.594 -0.891 H101 X6L 41 X6L H102 H102 H 0 0 N N N 40.649 -10.972 -22.252 -0.428 0.591 0.889 H102 X6L 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X6L C22 C21 SING Y N 1 X6L C22 C23 DOUB Y N 2 X6L C21 C20 DOUB Y N 3 X6L C23 C24 SING Y N 4 X6L C20 C19 SING Y N 5 X6L C24 C19 DOUB Y N 6 X6L C15 C14 SING Y N 7 X6L C15 C16 DOUB Y N 8 X6L C17 C18 DOUB Y N 9 X6L C17 C16 SING Y N 10 X6L C14 C13 DOUB Y N 11 X6L C18 C13 SING Y N 12 X6L C19 C16 SING N N 13 X6L C13 C11 SING N N 14 X6L C5 C4 DOUB Y N 15 X6L C5 C25 SING N N 16 X6L C5 N6 SING Y N 17 X6L C4 N3 SING N N 18 X6L C4 N8 SING Y N 19 X6L C7 N6 DOUB Y N 20 X6L C7 N8 SING Y N 21 X6L C7 S9 SING N N 22 X6L C25 N27 SING N N 23 X6L C25 O26 DOUB N N 24 X6L C2 N3 DOUB N N 25 X6L C2 N27 SING N N 26 X6L C2 N1 SING N N 27 X6L C11 C10 SING N N 28 X6L C11 O12 DOUB N N 29 X6L C10 S9 SING N N 30 X6L C22 H22 SING N N 31 X6L C21 H21 SING N N 32 X6L C23 H23 SING N N 33 X6L C20 H20 SING N N 34 X6L C24 H24 SING N N 35 X6L C15 H15 SING N N 36 X6L C14 H14 SING N N 37 X6L C17 H17 SING N N 38 X6L C18 H18 SING N N 39 X6L N8 H8 SING N N 40 X6L N27 H27 SING N N 41 X6L N1 H11N SING N N 42 X6L N1 H12N SING N N 43 X6L C10 H101 SING N N 44 X6L C10 H102 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X6L SMILES ACDLabs 12.01 "O=C(c2ccc(c1ccccc1)cc2)CSc4nc3c(N=C(N)NC3=O)n4" X6L InChI InChI 1.03 "InChI=1S/C19H15N5O2S/c20-18-22-16-15(17(26)24-18)21-19(23-16)27-10-14(25)13-8-6-12(7-9-13)11-4-2-1-3-5-11/h1-9H,10H2,(H4,20,21,22,23,24,26)" X6L InChIKey InChI 1.03 JPQMPGXXKRYOGX-UHFFFAOYSA-N X6L SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2[nH]c(SCC(=O)c3ccc(cc3)c4ccccc4)nc2C(=O)N1" X6L SMILES CACTVS 3.385 "NC1=Nc2[nH]c(SCC(=O)c3ccc(cc3)c4ccccc4)nc2C(=O)N1" X6L SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)c2ccc(cc2)C(=O)CSc3[nH]c4c(n3)C(=O)NC(=N4)N" X6L SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)c2ccc(cc2)C(=O)CSc3[nH]c4c(n3)C(=O)NC(=N4)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X6L "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-8-{[2-(biphenyl-4-yl)-2-oxoethyl]sulfanyl}-1,9-dihydro-6H-purin-6-one" X6L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-azanyl-8-[2-oxidanylidene-2-(4-phenylphenyl)ethyl]sulfanyl-1,9-dihydropurin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X6L "Create component" 2014-04-02 EBI X6L "Initial release" 2015-01-28 RCSB #