data_X6M # _chem_comp.id X6M _chem_comp.name "N-(6-fluoro-3'-{[6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carbonyl]amino}-4'-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-carbonyl)glycyl-3-methyl-L-valyl-(4R)-4-hydroxy-N-{(1S)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl}-L-prolinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C52 H59 F4 N9 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Protac MS67" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-20 _chem_comp.pdbx_modified_date 2021-10-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1030.140 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X6M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JTP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X6M N N1 N 0 1 N N N 14.086 15.495 -14.295 11.607 5.322 -0.024 N X6M 1 X6M C C1 C 0 1 N N N 14.934 16.255 -15.219 12.867 6.045 0.196 C X6M 2 X6M O O1 O 0 1 N N N 10.296 8.802 -20.301 14.113 -3.747 2.300 O X6M 3 X6M C1 C2 C 0 1 N N R 12.852 14.982 -14.936 11.749 4.333 -1.102 C1 X6M 4 X6M C10 C3 C 0 1 N N N 10.106 10.921 -16.826 11.035 -1.808 0.737 C10 X6M 5 X6M C11 C4 C 0 1 N N N 10.425 9.602 -16.884 12.061 -1.137 1.370 C11 X6M 6 X6M C12 C5 C 0 1 N N N 10.165 9.490 -19.272 13.162 -3.156 1.816 C12 X6M 7 X6M C13 C6 C 0 1 N N N 9.807 10.880 -19.233 12.136 -3.884 1.185 C13 X6M 8 X6M C14 C7 C 0 1 N N N 9.771 11.579 -18.080 11.078 -3.221 0.647 C14 X6M 9 X6M C15 C8 C 0 1 N N N 9.366 13.009 -18.105 9.967 -3.978 -0.034 C15 X6M 10 X6M C16 C9 C 0 1 Y N N 10.072 10.622 -12.560 7.481 0.279 -0.300 C16 X6M 11 X6M C17 C10 C 0 1 Y N N 9.982 10.692 -11.173 6.354 0.969 -0.741 C17 X6M 12 X6M C18 C11 C 0 1 Y N N 8.954 9.898 -10.448 5.079 0.244 -0.964 C18 X6M 13 X6M C19 C12 C 0 1 Y N N 7.765 9.560 -11.111 3.897 0.727 -0.415 C19 X6M 14 X6M C2 C13 C 0 1 N N N 12.037 16.091 -15.582 12.216 5.034 -2.380 C2 X6M 15 X6M C20 C14 C 0 1 Y N N 6.806 8.756 -10.497 2.703 0.040 -0.629 C20 X6M 16 X6M C21 C15 C 0 1 N N N 5.618 8.296 -11.281 1.443 0.548 -0.049 C21 X6M 17 X6M C22 C16 C 0 1 N N N 3.239 7.804 -11.306 -0.961 0.387 0.319 C22 X6M 18 X6M C23 C17 C 0 1 N N N 2.766 6.377 -11.085 -2.094 -0.532 -0.059 C23 X6M 19 X6M C24 C18 C 0 1 N N S 3.412 4.136 -10.324 -4.448 -1.159 -0.006 C24 X6M 20 X6M C25 C19 C 0 1 N N N 4.193 3.211 -11.302 -4.518 -2.319 0.990 C25 X6M 21 X6M C26 C20 C 0 1 N N N 5.666 3.634 -11.331 -3.248 -3.165 0.876 C26 X6M 22 X6M C27 C21 C 0 1 N N N 3.611 3.340 -12.709 -4.636 -1.764 2.411 C27 X6M 23 X6M C28 C22 C 0 1 N N N 4.107 1.740 -10.883 -5.739 -3.186 0.678 C28 X6M 24 X6M C29 C23 C 0 1 N N N 3.769 3.931 -8.844 -5.746 -0.394 0.023 C29 X6M 25 X6M C3 C24 C 0 1 N N N 11.994 14.153 -13.995 10.398 3.660 -1.354 C3 X6M 26 X6M C30 C25 C 0 1 N N S 3.248 3.071 -6.635 -7.949 0.113 -1.062 C30 X6M 27 X6M C31 C26 C 0 1 N N N 4.651 2.547 -6.381 -8.770 -0.040 0.193 C31 X6M 28 X6M C32 C27 C 0 1 N N S 6.565 2.528 -4.840 -10.782 0.391 1.498 C32 X6M 29 X6M C33 C28 C 0 1 N N N 7.444 3.690 -4.381 -10.364 1.456 2.513 C33 X6M 30 X6M C34 C29 C 0 1 Y N N 6.380 1.504 -3.743 -12.242 0.557 1.167 C34 X6M 31 X6M C35 C30 C 0 1 Y N N 5.202 1.429 -3.016 -12.636 1.523 0.257 C35 X6M 32 X6M C36 C31 C 0 1 Y N N 5.064 0.527 -1.975 -13.972 1.680 -0.051 C36 X6M 33 X6M C37 C32 C 0 1 Y N N 6.105 -0.330 -1.637 -14.926 0.863 0.557 C37 X6M 34 X6M C38 C33 C 0 1 Y N N 5.967 -1.291 -0.522 -16.359 1.026 0.231 C38 X6M 35 X6M C39 C34 C 0 1 Y N N 6.842 -1.645 0.474 -17.224 0.035 -0.074 C39 X6M 36 X6M C4 C35 C 0 1 N N S 14.815 14.419 -13.594 11.143 4.684 1.215 C4 X6M 37 X6M C40 C36 C 0 1 N N N 8.225 -1.114 0.684 -16.820 -1.416 -0.123 C40 X6M 38 X6M C41 C37 C 0 1 Y N N 5.162 -2.949 1.041 -18.673 1.714 -0.252 C41 X6M 39 X6M C42 C38 C 0 1 Y N N 7.278 -0.263 -2.374 -14.522 -0.109 1.473 C42 X6M 40 X6M C43 C39 C 0 1 Y N N 7.410 0.641 -3.410 -13.183 -0.259 1.769 C43 X6M 41 X6M C44 C40 C 0 1 N N N 2.200 2.057 -6.146 -8.703 -0.502 -2.260 C44 X6M 42 X6M C45 C41 C 0 1 N N R 1.037 2.255 -7.103 -8.073 -1.916 -2.377 C45 X6M 43 X6M C46 C42 C 0 1 N N N 1.722 2.492 -8.444 -6.601 -1.634 -1.986 C46 X6M 44 X6M C47 C43 C 0 1 Y N N 7.007 8.321 -9.191 2.700 -1.129 -1.394 C47 X6M 45 X6M C48 C44 C 0 1 Y N N 8.166 8.652 -8.510 3.875 -1.605 -1.936 C48 X6M 46 X6M C49 C45 C 0 1 Y N N 9.108 9.416 -9.152 5.063 -0.924 -1.732 C49 X6M 47 X6M C5 C46 C 0 1 N N N 16.051 14.946 -12.880 10.989 5.742 2.309 C5 X6M 48 X6M C50 C47 C 0 1 Y N N 10.874 11.528 -10.499 6.425 2.342 -0.971 C50 X6M 49 X6M C51 C48 C 0 1 Y N N 11.810 12.291 -11.175 7.609 3.018 -0.763 C51 X6M 50 X6M C6 C49 C 0 1 N N N 13.918 13.639 -12.641 9.792 4.010 0.963 C6 X6M 51 X6M C7 C50 C 0 1 Y N N 11.877 12.241 -12.562 8.734 2.333 -0.324 C7 X6M 52 X6M C8 C51 C 0 1 Y N N 11.012 11.377 -13.253 8.667 0.960 -0.086 C8 X6M 53 X6M C9 C52 C 0 1 N N N 10.031 11.519 -15.459 9.901 -1.061 0.164 C9 X6M 54 X6M F F1 F 0 1 N N N 9.361 13.508 -19.318 9.901 -3.599 -1.379 F X6M 55 X6M F1 F2 F 0 1 N N N 8.150 13.205 -17.595 10.217 -5.351 0.052 F1 X6M 56 X6M F2 F3 F 0 1 N N N 10.184 13.779 -17.407 8.751 -3.685 0.593 F2 X6M 57 X6M F3 F4 F 0 1 N N N 10.256 9.679 -8.493 6.210 -1.391 -2.271 F3 X6M 58 X6M N1 N2 N 0 1 N N N 12.730 13.095 -13.301 9.933 3.021 -0.114 N1 X6M 59 X6M N2 N3 N 0 1 N N N 11.088 11.255 -14.652 9.802 0.269 0.358 N2 X6M 60 X6M N3 N4 N 0 1 N N N 10.449 8.927 -18.059 13.099 -1.815 1.894 N3 X6M 61 X6M N4 N5 N 0 1 N N N 4.471 8.146 -10.617 0.289 -0.117 -0.257 N4 X6M 62 X6M N5 N6 N 0 1 N N N 3.686 5.533 -10.610 -3.346 -0.266 0.361 N5 X6M 63 X6M N6 N7 N 0 1 N N N 2.941 3.215 -8.063 -6.681 -0.617 -0.922 N6 X6M 64 X6M N7 N8 N 0 1 N N N 5.273 3.037 -5.304 -9.984 0.539 0.278 N7 X6M 65 X6M N8 N9 N 0 1 Y N N 6.367 -2.591 1.357 -18.447 0.445 -0.325 N8 X6M 66 X6M O1 O2 O 0 1 N N N 9.045 12.157 -15.093 9.053 -1.645 -0.484 O1 X6M 67 X6M O2 O3 O 0 1 N N N 5.152 1.712 -7.131 -8.337 -0.683 1.125 O2 X6M 68 X6M O3 O4 O 0 1 N N N 0.288 3.415 -6.727 -8.163 -2.407 -3.716 O3 X6M 69 X6M O4 O5 O 0 1 N N N 4.794 4.424 -8.407 -5.949 0.423 0.896 O4 X6M 70 X6M O5 O6 O 0 1 N N N 1.608 6.044 -11.332 -1.879 -1.511 -0.742 O5 X6M 71 X6M O6 O7 O 0 1 N N N 5.703 8.086 -12.488 1.446 1.566 0.616 O6 X6M 72 X6M S S1 S 0 1 Y N N 4.484 -2.187 -0.343 -17.246 2.549 0.180 S X6M 73 X6M H2 H2 H 0 1 N N N 15.830 16.608 -14.688 13.631 5.347 0.537 H2 X6M 74 X6M H3 H3 H 0 1 N N N 15.235 15.608 -16.057 13.188 6.508 -0.737 H3 X6M 75 X6M H4 H4 H 0 1 N N N 14.373 17.118 -15.606 12.716 6.816 0.951 H4 X6M 76 X6M H5 H5 H 0 1 N N N 13.167 14.310 -15.748 12.482 3.581 -0.811 H5 X6M 77 X6M H7 H7 H 0 1 N N N 10.666 9.078 -15.971 12.031 -0.060 1.444 H7 X6M 78 X6M H8 H8 H 0 1 N N N 9.559 11.382 -20.156 12.189 -4.961 1.127 H8 X6M 79 X6M H9 H9 H 0 1 N N N 9.403 9.973 -13.105 7.428 -0.785 -0.120 H9 X6M 80 X6M H10 H10 H 0 1 N N N 7.590 9.928 -12.111 3.904 1.632 0.176 H10 X6M 81 X6M H11 H11 H 0 1 N N N 11.135 15.663 -16.043 13.177 5.515 -2.200 H11 X6M 82 X6M H12 H12 H 0 1 N N N 11.745 16.825 -14.816 12.321 4.300 -3.179 H12 X6M 83 X6M H13 H13 H 0 1 N N N 12.642 16.588 -16.354 11.482 5.786 -2.671 H13 X6M 84 X6M H14 H14 H 0 1 N N N 3.397 7.950 -12.385 -1.161 1.387 -0.066 H14 X6M 85 X6M H15 H15 H 0 1 N N N 2.450 8.485 -10.956 -0.871 0.426 1.404 H15 X6M 86 X6M H16 H16 H 0 1 N N N 2.337 3.939 -10.452 -4.279 -1.551 -1.009 H16 X6M 87 X6M H17 H17 H 0 1 N N N 6.094 3.544 -10.322 -3.164 -3.560 -0.136 H17 X6M 88 X6M H18 H18 H 0 1 N N N 6.221 2.983 -12.023 -2.378 -2.547 1.099 H18 X6M 89 X6M H19 H19 H 0 1 N N N 5.741 4.678 -11.669 -3.298 -3.991 1.586 H19 X6M 90 X6M H20 H20 H 0 1 N N N 2.553 3.038 -12.698 -4.685 -2.591 3.120 H20 X6M 91 X6M H21 H21 H 0 1 N N N 3.691 4.385 -13.044 -3.766 -1.146 2.633 H21 X6M 92 X6M H22 H22 H 0 1 N N N 4.170 2.690 -13.398 -5.540 -1.161 2.492 H22 X6M 93 X6M H23 H23 H 0 1 N N N 4.521 1.622 -9.871 -5.615 -3.649 -0.302 H23 X6M 94 X6M H24 H24 H 0 1 N N N 3.055 1.418 -10.889 -5.836 -3.962 1.436 H24 X6M 95 X6M H25 H25 H 0 1 N N N 4.683 1.124 -11.589 -6.634 -2.565 0.675 H25 X6M 96 X6M H26 H26 H 0 1 N N N 11.559 14.825 -13.240 9.672 4.409 -1.671 H26 X6M 97 X6M H27 H27 H 0 1 N N N 11.188 13.688 -14.581 10.507 2.905 -2.133 H27 X6M 98 X6M H28 H28 H 0 1 N N N 3.107 4.028 -6.111 -7.753 1.169 -1.250 H28 X6M 99 X6M H29 H29 H 0 1 N N N 7.072 2.035 -5.683 -10.616 -0.600 1.922 H29 X6M 100 X6M H30 H30 H 0 1 N N N 8.413 3.302 -4.034 -10.530 2.447 2.089 H30 X6M 101 X6M H31 H31 H 0 1 N N N 7.606 4.381 -5.221 -10.958 1.346 3.421 H31 X6M 102 X6M H32 H32 H 0 1 N N N 6.946 4.223 -3.558 -9.308 1.336 2.753 H32 X6M 103 X6M H33 H33 H 0 1 N N N 4.380 2.084 -3.265 -11.897 2.154 -0.212 H33 X6M 104 X6M H34 H34 H 0 1 N N N 4.138 0.489 -1.420 -14.278 2.435 -0.760 H34 X6M 105 X6M H35 H35 H 0 1 N N N 15.165 13.708 -14.356 11.869 3.935 1.533 H35 X6M 106 X6M H36 H36 H 0 1 N N N 8.672 -1.594 1.567 -17.028 -1.883 0.840 H36 X6M 107 X6M H37 H37 H 0 1 N N N 8.840 -1.331 -0.202 -17.387 -1.925 -0.903 H37 X6M 108 X6M H38 H38 H 0 1 N N N 8.180 -0.026 0.841 -15.755 -1.490 -0.341 H38 X6M 109 X6M H39 H39 H 0 1 N N N 4.615 -3.683 1.614 -19.630 2.181 -0.434 H39 X6M 110 X6M H40 H40 H 0 1 N N N 8.097 -0.925 -2.135 -15.256 -0.744 1.947 H40 X6M 111 X6M H41 H41 H 0 1 N N N 8.333 0.675 -3.970 -12.868 -1.014 2.475 H41 X6M 112 X6M H42 H42 H 0 1 N N N 1.898 2.273 -5.111 -9.770 -0.572 -2.050 H42 X6M 113 X6M H43 H43 H 0 1 N N N 2.589 1.030 -6.208 -8.526 0.078 -3.166 H43 X6M 114 X6M H44 H44 H 0 1 N N N 0.409 1.353 -7.143 -8.538 -2.610 -1.677 H44 X6M 115 X6M H45 H45 H 0 1 N N N 1.092 3.101 -9.109 -6.128 -2.541 -1.610 H45 X6M 116 X6M H46 H46 H 0 1 N N N 1.964 1.540 -8.939 -6.049 -1.245 -2.842 H46 X6M 117 X6M H47 H47 H 0 1 N N N 6.253 7.720 -8.704 1.776 -1.662 -1.560 H47 X6M 118 X6M H48 H48 H 0 1 N N N 8.325 8.316 -7.496 3.868 -2.509 -2.526 H48 X6M 119 X6M H49 H49 H 0 1 N N N 16.564 14.116 -12.372 10.263 6.490 1.991 H49 X6M 120 X6M H50 H50 H 0 1 N N N 16.731 15.403 -13.614 10.645 5.268 3.228 H50 X6M 121 X6M H51 H51 H 0 1 N N N 15.752 15.701 -12.138 11.951 6.223 2.486 H51 X6M 122 X6M H52 H52 H 0 1 N N N 10.833 11.581 -9.421 5.551 2.877 -1.313 H52 X6M 123 X6M H53 H53 H 0 1 N N N 12.489 12.926 -10.624 7.662 4.082 -0.943 H53 X6M 124 X6M H54 H54 H 0 1 N N N 14.497 12.806 -12.216 9.459 3.511 1.873 H54 X6M 125 X6M H55 H55 H 0 1 N N N 13.595 14.311 -11.833 9.059 4.763 0.673 H55 X6M 126 X6M H56 H56 H 0 1 N N N 11.951 10.964 -15.065 10.518 0.748 0.805 H56 X6M 127 X6M H57 H57 H 0 1 N N N 4.459 8.272 -9.625 0.286 -0.929 -0.787 H57 X6M 128 X6M H58 H58 H 0 1 N N N 4.609 5.880 -10.443 -3.518 0.518 0.907 H58 X6M 129 X6M H59 H59 H 0 1 N N N 4.839 3.780 -4.795 -10.330 1.054 -0.468 H59 X6M 130 X6M H60 H60 H 0 1 N N N -0.136 3.261 -5.891 -7.782 -3.288 -3.838 H60 X6M 131 X6M H1 H1 H 0 1 N N N 10.689 7.957 -18.037 13.814 -1.328 2.333 H1 X6M 132 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X6M O C12 DOUB N N 1 X6M F C15 SING N N 2 X6M C12 C13 SING N N 3 X6M C12 N3 SING N N 4 X6M C13 C14 DOUB N N 5 X6M C15 C14 SING N N 6 X6M C15 F1 SING N N 7 X6M C15 F2 SING N N 8 X6M C14 C10 SING N N 9 X6M N3 C11 SING N N 10 X6M C11 C10 DOUB N N 11 X6M C10 C9 SING N N 12 X6M C2 C1 SING N N 13 X6M C9 O1 DOUB N N 14 X6M C9 N2 SING N N 15 X6M C N SING N N 16 X6M C1 N SING N N 17 X6M C1 C3 SING N N 18 X6M N2 C8 SING N N 19 X6M N C4 SING N N 20 X6M C3 N1 SING N N 21 X6M C4 C5 SING N N 22 X6M C4 C6 SING N N 23 X6M N1 C6 SING N N 24 X6M N1 C7 SING N N 25 X6M C8 C7 DOUB Y N 26 X6M C8 C16 SING Y N 27 X6M C27 C25 SING N N 28 X6M C7 C51 SING Y N 29 X6M C16 C17 DOUB Y N 30 X6M O6 C21 DOUB N N 31 X6M O5 C23 DOUB N N 32 X6M C26 C25 SING N N 33 X6M C22 C23 SING N N 34 X6M C22 N4 SING N N 35 X6M C25 C28 SING N N 36 X6M C25 C24 SING N N 37 X6M C21 N4 SING N N 38 X6M C21 C20 SING N N 39 X6M C51 C50 DOUB Y N 40 X6M C17 C50 SING Y N 41 X6M C17 C18 SING N N 42 X6M C19 C20 DOUB Y N 43 X6M C19 C18 SING Y N 44 X6M C23 N5 SING N N 45 X6M N5 C24 SING N N 46 X6M C20 C47 SING Y N 47 X6M C18 C49 DOUB Y N 48 X6M C24 C29 SING N N 49 X6M C47 C48 DOUB Y N 50 X6M C49 C48 SING Y N 51 X6M C49 F3 SING N N 52 X6M C29 O4 DOUB N N 53 X6M C29 N6 SING N N 54 X6M C46 N6 SING N N 55 X6M C46 C45 SING N N 56 X6M N6 C30 SING N N 57 X6M O2 C31 DOUB N N 58 X6M C45 O3 SING N N 59 X6M C45 C44 SING N N 60 X6M C30 C31 SING N N 61 X6M C30 C44 SING N N 62 X6M C31 N7 SING N N 63 X6M N7 C32 SING N N 64 X6M C32 C33 SING N N 65 X6M C32 C34 SING N N 66 X6M C34 C43 DOUB Y N 67 X6M C34 C35 SING Y N 68 X6M C43 C42 SING Y N 69 X6M C35 C36 DOUB Y N 70 X6M C42 C37 DOUB Y N 71 X6M C36 C37 SING Y N 72 X6M C37 C38 SING N N 73 X6M C38 S SING Y N 74 X6M C38 C39 DOUB Y N 75 X6M S C41 SING Y N 76 X6M C39 C40 SING N N 77 X6M C39 N8 SING Y N 78 X6M C41 N8 DOUB Y N 79 X6M C H2 SING N N 80 X6M C H3 SING N N 81 X6M C H4 SING N N 82 X6M C1 H5 SING N N 83 X6M C11 H7 SING N N 84 X6M C13 H8 SING N N 85 X6M C16 H9 SING N N 86 X6M C19 H10 SING N N 87 X6M C2 H11 SING N N 88 X6M C2 H12 SING N N 89 X6M C2 H13 SING N N 90 X6M C22 H14 SING N N 91 X6M C22 H15 SING N N 92 X6M C24 H16 SING N N 93 X6M C26 H17 SING N N 94 X6M C26 H18 SING N N 95 X6M C26 H19 SING N N 96 X6M C27 H20 SING N N 97 X6M C27 H21 SING N N 98 X6M C27 H22 SING N N 99 X6M C28 H23 SING N N 100 X6M C28 H24 SING N N 101 X6M C28 H25 SING N N 102 X6M C3 H26 SING N N 103 X6M C3 H27 SING N N 104 X6M C30 H28 SING N N 105 X6M C32 H29 SING N N 106 X6M C33 H30 SING N N 107 X6M C33 H31 SING N N 108 X6M C33 H32 SING N N 109 X6M C35 H33 SING N N 110 X6M C36 H34 SING N N 111 X6M C4 H35 SING N N 112 X6M C40 H36 SING N N 113 X6M C40 H37 SING N N 114 X6M C40 H38 SING N N 115 X6M C41 H39 SING N N 116 X6M C42 H40 SING N N 117 X6M C43 H41 SING N N 118 X6M C44 H42 SING N N 119 X6M C44 H43 SING N N 120 X6M C45 H44 SING N N 121 X6M C46 H45 SING N N 122 X6M C46 H46 SING N N 123 X6M C47 H47 SING N N 124 X6M C48 H48 SING N N 125 X6M C5 H49 SING N N 126 X6M C5 H50 SING N N 127 X6M C5 H51 SING N N 128 X6M C50 H52 SING N N 129 X6M C51 H53 SING N N 130 X6M C6 H54 SING N N 131 X6M C6 H55 SING N N 132 X6M N2 H56 SING N N 133 X6M N4 H57 SING N N 134 X6M N5 H58 SING N N 135 X6M N7 H59 SING N N 136 X6M O3 H60 SING N N 137 X6M N3 H1 SING N N 138 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X6M SMILES ACDLabs 12.01 "N1(C(C)CN(CC1C)c2ccc(cc2NC(C3=CNC(=O)C=C3C(F)(F)F)=O)c4c(ccc(c4)C(NCC(NC(C(=O)N7C(C(NC(C)c5ccc(cc5)c6scnc6C)=O)CC(O)C7)C(C)(C)C)=O)=O)F)C" X6M InChI InChI 1.03 "InChI=1S/C52H59F4N9O7S/c1-27-23-64(24-28(2)63(27)8)41-16-14-33(18-40(41)61-48(70)37-21-57-43(67)20-38(37)52(54,55)56)36-17-34(13-15-39(36)53)47(69)58-22-44(68)62-46(51(5,6)7)50(72)65-25-35(66)19-42(65)49(71)60-29(3)31-9-11-32(12-10-31)45-30(4)59-26-73-45/h9-18,20-21,26-29,35,42,46,66H,19,22-25H2,1-8H3,(H,57,67)(H,58,69)(H,60,71)(H,61,70)(H,62,68)/t27-,28+,29-,35+,42-,46+/m0/s1" X6M InChIKey InChI 1.03 HBHSDSLZXDASLT-FLKKWHKHSA-N X6M SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1CN(C[C@H](C)N1C)c2ccc(cc2NC(=O)C3=CNC(=O)C=C3C(F)(F)F)c4cc(ccc4F)C(=O)NCC(=O)N[C@H](C(=O)N5C[C@H](O)C[C@H]5C(=O)N[C@@H](C)c6ccc(cc6)c7scnc7C)C(C)(C)C" X6M SMILES CACTVS 3.385 "C[CH]1CN(C[CH](C)N1C)c2ccc(cc2NC(=O)C3=CNC(=O)C=C3C(F)(F)F)c4cc(ccc4F)C(=O)NCC(=O)N[CH](C(=O)N5C[CH](O)C[CH]5C(=O)N[CH](C)c6ccc(cc6)c7scnc7C)C(C)(C)C" X6M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(scn1)c2ccc(cc2)[C@H](C)NC(=O)[C@@H]3C[C@H](CN3C(=O)[C@H](C(C)(C)C)NC(=O)CNC(=O)c4ccc(c(c4)c5ccc(c(c5)NC(=O)C6=CNC(=O)C=C6C(F)(F)F)N7C[C@H](N([C@H](C7)C)C)C)F)O" X6M SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(scn1)c2ccc(cc2)C(C)NC(=O)C3CC(CN3C(=O)C(C(C)(C)C)NC(=O)CNC(=O)c4ccc(c(c4)c5ccc(c(c5)NC(=O)C6=CNC(=O)C=C6C(F)(F)F)N7CC(N(C(C7)C)C)C)F)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier X6M "SYSTEMATIC NAME" ACDLabs 12.01 "N-(6-fluoro-3'-{[6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carbonyl]amino}-4'-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-carbonyl)glycyl-3-methyl-L-valyl-(4R)-4-hydroxy-N-{(1S)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl}-L-prolinamide" X6M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[5-[5-[[2-[[(2~{S})-3,3-dimethyl-1-[(2~{S},4~{R})-2-[[(1~{S})-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]carbamoyl]-4-oxidanyl-pyrrolidin-1-yl]-1-oxidanylidene-butan-2-yl]amino]-2-oxidanylidene-ethyl]carbamoyl]-2-fluoranyl-phenyl]-2-[(3~{S},5~{R})-3,4,5-trimethylpiperazin-1-yl]phenyl]-6-oxidanylidene-4-(trifluoromethyl)-1~{H}-pyridine-3-carboxamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id X6M _pdbx_chem_comp_synonyms.name "Protac MS67" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X6M "Create component" 2020-08-20 RCSB X6M "Modify synonyms" 2021-03-01 PDBE X6M "Initial release" 2021-10-06 RCSB ##