data_X8X # _chem_comp.id X8X _chem_comp.name L-galactono-1,4-lactone _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H10 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(3S,4S,5R)-5-[(1S)-1,2-bis(oxidanyl)ethyl]-3,4-bis(oxidanyl)oxolan-2-one; gamma-L-galactonolactone" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-25 _chem_comp.pdbx_modified_date 2024-04-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 178.140 _chem_comp.one_letter_code ? _chem_comp.three_letter_code X8X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QNB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal X8X O1 O1 O 0 1 N N N N N N 6.884 7.925 25.990 -2.271 -2.055 -0.466 O1 X8X 1 X8X C1 C1 C 0 1 N N N N N N 7.631 8.767 26.399 -1.549 -1.117 -0.222 C1 X8X 2 X8X O2 O2 O 0 1 N N N N N N 7.721 9.096 27.701 -0.204 -1.136 -0.219 O2 X8X 3 X8X C2 C2 C 0 1 N N R N N N 8.838 10.027 27.877 0.276 0.167 -0.669 C2 X8X 4 X8X C3 C3 C 0 1 N N S N N N 8.656 10.872 29.108 1.642 0.472 -0.049 C3 X8X 5 X8X O3 O3 O 0 1 N N N N N N 8.662 10.181 30.330 1.511 0.565 1.370 O3 X8X 6 X8X C4 C4 C 0 1 N N N N N N 9.275 12.247 29.127 2.622 -0.649 -0.399 C4 X8X 7 X8X O4 O4 O 0 1 N N N N N N 8.971 12.959 30.313 3.925 -0.308 0.079 O4 X8X 8 X8X C5 C5 C 0 1 N N S N N N 8.844 10.769 26.555 -0.778 1.177 -0.168 C5 X8X 9 X8X O5 O5 O 0 1 N N N N N N 10.106 11.364 26.352 -1.084 2.133 -1.185 O5 X8X 10 X8X C6 C6 C 0 1 N N S N N N 8.628 9.603 25.619 -2.001 0.286 0.127 C6 X8X 11 X8X O6 O6 O 0 1 N N N N N N 8.181 9.973 24.337 -2.350 0.367 1.510 O6 X8X 12 X8X H1 H1 H 0 1 N N N N N N 9.776 9.460 27.969 0.341 0.192 -1.757 H1 X8X 13 X8X H2 H2 H 0 1 N N N N N N 7.592 11.134 29.015 2.016 1.418 -0.443 H2 X8X 14 X8X H3 H3 H 0 1 N N N N N N 8.541 10.797 31.043 1.182 -0.242 1.789 H3 X8X 15 X8X H4 H4 H 0 1 N N N N N N 10.367 12.144 29.047 2.295 -1.577 0.069 H4 X8X 16 X8X H5 H5 H 0 1 N N N N N N 8.896 12.817 28.266 2.655 -0.779 -1.480 H5 X8X 17 X8X H6 H6 H 0 1 N N N N N N 9.380 13.816 30.282 4.600 -0.975 -0.107 H6 X8X 18 X8X H7 H7 H 0 1 N N N N N N 8.015 11.489 26.497 -0.433 1.677 0.737 H7 X8X 19 X8X H8 H8 H 0 1 N N N N N N 10.214 12.092 26.953 -1.741 2.791 -0.922 H8 X8X 20 X8X H9 H9 H 0 1 N N N N N N 9.569 9.039 25.540 -2.846 0.580 -0.497 H9 X8X 21 X8X H10 H10 H 0 1 N N N N N N 7.413 9.462 24.109 -3.082 -0.211 1.766 H10 X8X 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal X8X O6 C6 SING N N 1 X8X C6 C1 SING N N 2 X8X C6 C5 SING N N 3 X8X O1 C1 DOUB N N 4 X8X O5 C5 SING N N 5 X8X C1 O2 SING N N 6 X8X C5 C2 SING N N 7 X8X O2 C2 SING N N 8 X8X C2 C3 SING N N 9 X8X C3 C4 SING N N 10 X8X C3 O3 SING N N 11 X8X C4 O4 SING N N 12 X8X C2 H1 SING N N 13 X8X C3 H2 SING N N 14 X8X O3 H3 SING N N 15 X8X C4 H4 SING N N 16 X8X C4 H5 SING N N 17 X8X O4 H6 SING N N 18 X8X C5 H7 SING N N 19 X8X O5 H8 SING N N 20 X8X C6 H9 SING N N 21 X8X O6 H10 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor X8X InChI InChI 1.06 "InChI=1S/C6H10O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2-5,7-10H,1H2/t2-,3-,4-,5+/m0/s1" X8X InChIKey InChI 1.06 SXZYCXMUPBBULW-NEEWWZBLSA-N X8X SMILES_CANONICAL CACTVS 3.385 "OC[C@H](O)[C@H]1OC(=O)[C@@H](O)[C@@H]1O" X8X SMILES CACTVS 3.385 "OC[CH](O)[CH]1OC(=O)[CH](O)[CH]1O" X8X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]([C@@H]1[C@H]([C@@H](C(=O)O1)O)O)O)O" X8X SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C1C(C(C(=O)O1)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id X8X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},4~{S},5~{R})-5-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4-bis(oxidanyl)oxolan-2-one" # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 X8X "(3S,4S,5R)-5-[(1S)-1,2-bis(oxidanyl)ethyl]-3,4-bis(oxidanyl)oxolan-2-one" PDB ? 2 X8X gamma-L-galactonolactone PUBCHEM ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site X8X "Create component" 2023-10-25 PDBE X8X "Initial release" 2024-05-01 RCSB #