data_XAX # _chem_comp.id XAX _chem_comp.name "{[(5aR,8R,9aR)-2-amino-4-oxo-6,7-di(sulfanyl-kappaS)-3,5,5a,8,9a,10-hexahydro-4H-pyrano[3,2-g]pteridin-8-yl]methyl dihydrogenato(2-) phosphate}(hydroxy)oxo(thioxo)molybdenum" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 Mo N5 O8 P S3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-06-06 _chem_comp.pdbx_modified_date 2012-02-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 554.348 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XAX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3AX7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XAX P P P 0 1 N N N 5.556 -10.893 15.147 1.700 -4.695 -0.429 P XAX 1 XAX MO MO MO 0 0 N N N 10.207 -13.160 20.512 -3.457 0.588 -0.420 MO XAX 2 XAX N1 N1 N 0 1 N N N 9.036 -4.838 17.602 4.876 2.093 0.676 N1 XAX 3 XAX O1 O1 O 0 1 N N N 10.529 -15.021 19.694 -4.416 -0.602 -1.249 O1 XAX 4 XAX C2 C2 C 0 1 N N N 8.708 -3.957 18.580 5.329 2.703 -0.400 C2 XAX 5 XAX N2 N2 N 0 1 N N N 8.566 -2.642 18.300 6.673 2.969 -0.508 N2 XAX 6 XAX O2 O2 O 0 1 N N N 8.737 -13.144 21.919 -2.652 1.275 -2.114 O2 XAX 7 XAX N3 N3 N 0 1 N N N 8.541 -4.345 19.876 4.491 3.076 -1.408 N3 XAX 8 XAX S3 S3 S 0 1 N N N 12.277 -13.707 21.295 -5.182 1.548 0.410 S3 XAX 9 XAX C4 C4 C 0 1 N N N 8.720 -5.624 20.291 3.163 2.859 -1.300 C4 XAX 10 XAX O4 O4 O 0 1 N N N 8.520 -5.922 21.597 2.402 3.216 -2.183 O4 XAX 11 XAX N5 N5 N 0 1 N N N 9.567 -7.998 19.631 1.296 1.982 0.009 N5 XAX 12 XAX C6 C6 C 0 1 N N R 10.183 -8.824 18.584 0.798 1.585 1.333 C6 XAX 13 XAX C7 C7 C 0 1 N N R 9.586 -8.530 17.186 1.762 0.570 1.940 C7 XAX 14 XAX N8 N8 N 0 1 N N N 9.486 -7.084 16.942 3.124 1.112 1.925 N8 XAX 15 XAX C9 C9 C 0 1 N N N 8.943 -6.696 19.288 2.677 2.214 -0.160 C9 XAX 16 XAX "C1'" C1* C 0 1 N N N 10.097 -10.320 18.864 -0.573 0.917 1.122 C1* XAX 17 XAX "S1'" S1* S 0 1 N N N 11.008 -11.002 20.095 -1.988 1.939 0.907 S1* XAX 18 XAX C10 C10 C 0 1 N N N 9.199 -6.167 17.906 3.576 1.808 0.817 C10 XAX 19 XAX O1P O1P O 0 1 N N N 5.382 -12.387 15.292 2.122 -4.242 -1.916 O1P XAX 20 XAX "C2'" C2* C 0 1 N N N 9.299 -11.124 18.126 -0.708 -0.384 1.101 C2* XAX 21 XAX "S2'" S2* S 0 1 N N N 9.420 -12.781 18.294 -2.303 -1.084 0.850 S2* XAX 22 XAX O2P O2P O 0 1 N N N 6.725 -10.438 14.309 0.448 -5.483 -0.490 O2P XAX 23 XAX "C3'" C3* C 0 1 N N R 8.303 -10.545 17.139 0.490 -1.331 1.290 C3* XAX 24 XAX "O3'" O3* O 0 1 N N N 8.277 -9.105 17.115 1.710 -0.617 1.145 O3* XAX 25 XAX O3P O3P O 0 1 N N N 4.282 -10.121 14.954 2.871 -5.597 0.209 O3P XAX 26 XAX "C4'" C4* C 0 1 N N N 6.893 -11.018 17.465 0.426 -2.444 0.241 C4* XAX 27 XAX "O4'" O4* O 0 1 N N N 5.937 -10.358 16.655 1.469 -3.390 0.484 O4* XAX 28 XAX HN2 HN2 H 0 1 N N N 8.703 -2.312 17.366 7.278 2.708 0.204 HN2 XAX 29 XAX HN2A HN2A H 0 0 N N N 8.324 -1.999 19.027 7.016 3.418 -1.296 HN2A XAX 30 XAX HO2 HO2 H 0 1 N N N 9.116 -13.300 22.776 -3.017 0.873 -2.914 HO2 XAX 31 XAX HN3 HN3 H 0 1 N N N 8.275 -3.656 20.551 4.852 3.496 -2.204 HN3 XAX 32 XAX HN5 HN5 H 0 1 N N N 8.839 -8.556 20.030 0.684 2.103 -0.731 HN5 XAX 33 XAX H6 H6 H 0 1 N N N 11.246 -8.541 18.592 0.699 2.451 1.977 H6 XAX 34 XAX H7 H7 H 0 1 N N N 10.248 -8.965 16.423 1.467 0.342 2.963 H7 XAX 35 XAX HN8 HN8 H 0 1 N N N 10.386 -6.819 16.595 3.707 0.983 2.690 HN8 XAX 36 XAX HO1P HO1P H 0 0 N N N 6.068 -12.834 14.810 2.935 -3.720 -1.952 HO1P XAX 37 XAX "H3'" H3* H 0 1 N N N 8.637 -10.902 16.154 0.446 -1.774 2.286 H3* XAX 38 XAX HO3P HO3P H 0 0 N N N 4.419 -9.439 14.307 3.064 -6.402 -0.290 HO3P XAX 39 XAX "H4'" H4* H 0 1 N N N 6.828 -12.101 17.284 -0.540 -2.945 0.301 H4* XAX 40 XAX "H4'A" H4*A H 0 0 N N N 6.678 -10.800 18.522 0.551 -2.013 -0.753 H4*A XAX 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XAX O2P P DOUB N N 1 XAX O3P P SING N N 2 XAX P O1P SING N N 3 XAX P "O4'" SING N N 4 XAX "S2'" MO SING N N 5 XAX O1 MO DOUB N N 6 XAX "S1'" MO SING N N 7 XAX MO S3 DOUB N N 8 XAX MO O2 SING N N 9 XAX N1 C10 SING N N 10 XAX N1 C2 DOUB N N 11 XAX N2 C2 SING N N 12 XAX C2 N3 SING N N 13 XAX N3 C4 SING N N 14 XAX C9 C4 SING N N 15 XAX C4 O4 DOUB N N 16 XAX C6 N5 SING N N 17 XAX C9 N5 SING N N 18 XAX C7 C6 SING N N 19 XAX C6 "C1'" SING N N 20 XAX N8 C7 SING N N 21 XAX "O3'" C7 SING N N 22 XAX N8 C10 SING N N 23 XAX C10 C9 DOUB N N 24 XAX "C2'" "C1'" DOUB N N 25 XAX "C1'" "S1'" SING N N 26 XAX "C3'" "C2'" SING N N 27 XAX "C2'" "S2'" SING N N 28 XAX "O3'" "C3'" SING N N 29 XAX "C3'" "C4'" SING N N 30 XAX "O4'" "C4'" SING N N 31 XAX N2 HN2 SING N N 32 XAX N2 HN2A SING N N 33 XAX O2 HO2 SING N N 34 XAX N3 HN3 SING N N 35 XAX N5 HN5 SING N N 36 XAX C6 H6 SING N N 37 XAX C7 H7 SING N N 38 XAX N8 HN8 SING N N 39 XAX O1P HO1P SING N N 40 XAX "C3'" "H3'" SING N N 41 XAX O3P HO3P SING N N 42 XAX "C4'" "H4'" SING N N 43 XAX "C4'" "H4'A" SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XAX SMILES ACDLabs 12.01 "O=P(O)(O)OCC2OC3NC=4N=C(NC(=O)C=4NC3C=1S[Mo](=O)(=S)(O)SC=12)N" XAX InChI InChI 1.03 "InChI=1S/C10H14N5O6PS2.Mo.H2O.O.S/c11-10-14-7-4(8(16)15-10)12-3-6(24)5(23)2(21-9(3)13-7)1-20-22(17,18)19;;;;/h2-3,9,12,23-24H,1H2,(H2,17,18,19)(H4,11,13,14,15,16);;1H2;;/q;+3;;;/p-3/t2-,3+,9-;;;;/m1..../s1" XAX InChIKey InChI 1.03 OIQYCPXIZLGKQT-BKZHXLINSA-K XAX SMILES_CANONICAL CACTVS 3.370 "NC1=NC2=C(N[C@@H]3[C@H](N2)O[C@H](CO[P](O)(O)=O)C4=C3S[Mo](O)(=O)(=S)S4)C(=O)N1" XAX SMILES CACTVS 3.370 "NC1=NC2=C(N[CH]3[CH](N2)O[CH](CO[P](O)(O)=O)C4=C3S[Mo](O)(=O)(=S)S4)C(=O)N1" XAX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "C([C@@H]1C2=C([C@H]3[C@@H](O1)NC4=C(N3)C(=O)NC(=N4)N)S[Mo](=O)(=S)(S2)O)OP(=O)(O)O" XAX SMILES "OpenEye OEToolkits" 1.7.2 "C(C1C2=C(C3C(O1)NC4=C(N3)C(=O)NC(=N4)N)S[Mo](=O)(=S)(S2)O)OP(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XAX "SYSTEMATIC NAME" ACDLabs 12.01 "{[(5aR,8R,9aR)-2-amino-4-oxo-6,7-di(sulfanyl-kappaS)-3,5,5a,8,9a,10-hexahydro-4H-pyrano[3,2-g]pteridin-8-yl]methyl dihydrogenato(2-) phosphate}(hydroxy)oxo(thioxo)molybdenum" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XAX "Create component" 2011-06-06 PDBJ #