data_XB5 # _chem_comp.id XB5 _chem_comp.name "5-[2-(dimethylamino)ethoxy]-N-{(1R)-1-[(3M,5P)-3-(1-ethyl-1H-pyrazol-3-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-2-methylbenzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H36 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-10-26 _chem_comp.pdbx_modified_date 2024-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 500.635 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XB5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UOB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XB5 C21 C1 C 0 1 Y N N N N N 52.364 28.353 -3.563 -5.357 -0.647 0.839 C21 XB5 1 XB5 C11 C2 C 0 1 N N N N N N 53.443 39.931 0.061 6.094 1.751 3.214 C11 XB5 2 XB5 C12 C3 C 0 1 Y N N N N N 51.208 35.027 -0.170 2.953 -1.430 -0.160 C12 XB5 3 XB5 C4 C4 C 0 1 Y N N N N N 49.777 36.781 0.630 5.206 -2.168 0.226 C4 XB5 4 XB5 C3 C5 C 0 1 Y N N N N N 48.844 35.834 1.005 4.818 -3.480 0.030 C3 XB5 5 XB5 C2 C6 C 0 1 Y N N N N N 49.053 34.471 0.810 3.503 -3.779 -0.265 C2 XB5 6 XB5 C5 C7 C 0 1 Y N N N N N 50.959 36.377 0.039 4.276 -1.142 0.131 C5 XB5 7 XB5 C1 C8 C 0 1 N N N N N N 47.973 33.491 1.191 3.084 -5.211 -0.477 C1 XB5 8 XB5 C16 C9 C 0 1 N N R N N N 51.673 30.594 0.887 -1.134 -2.389 -1.177 C16 XB5 9 XB5 C20 C10 C 0 1 Y N N N N N 52.921 29.075 -2.393 -4.042 -0.393 0.197 C20 XB5 10 XB5 C19 C11 C 0 1 Y N N N N N 52.085 29.462 -1.348 -3.230 -1.463 -0.177 C19 XB5 11 XB5 C18 C12 C 0 1 Y N N N N N 52.577 30.179 -0.262 -2.007 -1.229 -0.775 C18 XB5 12 XB5 C17 C13 C 0 1 N N N N N N 52.236 30.177 2.242 -1.286 -2.646 -2.677 C17 XB5 13 XB5 C24 C14 C 0 1 N N N N N N 52.366 26.852 -6.857 -8.505 0.293 2.340 C24 XB5 14 XB5 C10 C15 C 0 1 N N N N N N 55.790 39.461 -0.445 5.569 3.813 2.058 C10 XB5 15 XB5 C13 C16 C 0 1 Y N N N N N 50.261 34.067 0.215 2.560 -2.754 -0.357 C13 XB5 16 XB5 C14 C17 C 0 1 N N N N N N 50.562 32.611 0.019 1.148 -3.071 -0.663 C14 XB5 17 XB5 C22 C18 C 0 1 Y N N N N N 53.023 28.003 -4.722 -6.250 0.300 1.249 C22 XB5 18 XB5 C26 C19 C 0 1 Y N N N N N 51.057 27.889 -3.775 -5.911 -1.908 1.131 C26 XB5 19 XB5 C27 C20 C 0 1 Y N N N N N 54.272 29.405 -2.351 -3.621 0.911 -0.038 C27 XB5 20 XB5 C28 C21 C 0 1 Y N N N N N 54.779 30.122 -1.271 -2.388 1.142 -0.640 C28 XB5 21 XB5 C29 C22 C 0 1 Y N N N N N 56.203 30.503 -1.239 -1.933 2.531 -0.894 C29 XB5 22 XB5 C32 C23 C 0 1 N N N N N N 58.749 32.614 -0.006 0.283 5.086 -2.171 C32 XB5 23 XB5 C33 C24 C 0 1 N N N N N N 60.226 32.399 -0.234 1.640 4.663 -1.603 C33 XB5 24 XB5 C34 C25 C 0 1 Y N N N N N 58.352 30.737 -1.647 -1.859 4.760 -0.908 C34 XB5 25 XB5 C35 C26 C 0 1 Y N N N N N 57.262 30.012 -2.022 -2.592 3.707 -0.486 C35 XB5 26 XB5 C36 C27 C 0 1 Y N N N N N 53.930 30.502 -0.235 -1.582 0.065 -1.005 C36 XB5 27 XB5 C7 C28 C 0 1 N N N N N N 52.808 37.215 -1.269 6.043 0.371 0.620 C7 XB5 28 XB5 C8 C29 C 0 1 N N N N N N 54.122 37.667 -0.696 6.288 1.871 0.803 C8 XB5 29 XB5 N15 N1 N 0 1 N N N N N N 51.380 32.033 0.910 0.265 -2.075 -0.875 N15 XB5 30 XB5 N23 N2 N 0 1 Y N N N N N 52.140 27.389 -5.517 -7.311 -0.342 1.777 N23 XB5 31 XB5 N25 N3 N 0 1 Y N N N N N 50.912 27.303 -4.956 -7.078 -1.720 1.687 N25 XB5 32 XB5 N30 N4 N 0 1 Y N N N N N 56.625 31.479 -0.426 -0.838 2.882 -1.535 N30 XB5 33 XB5 N31 N5 N 0 1 Y N N N N N 57.946 31.601 -0.699 -0.775 4.281 -1.556 N31 XB5 34 XB5 N9 N6 N 0 1 N N N N N N 54.377 39.139 -0.786 5.554 2.346 1.984 N9 XB5 35 XB5 O37 O1 O 0 1 N N N N N N 50.065 31.986 -0.914 0.784 -4.229 -0.722 O37 XB5 36 XB5 O6 O2 O 0 1 N N N N N N 51.783 37.426 -0.288 4.664 0.147 0.324 O6 XB5 37 XB5 H11A H1 H 0 0 N N N N N N 53.673 41.002 -0.041 7.143 2.026 3.320 H11A XB5 38 XB5 H11C H2 H 0 0 N N N N N N 52.408 39.746 -0.262 5.532 2.120 4.072 H11C XB5 39 XB5 H11B H3 H 0 0 N N N N N N 53.558 39.631 1.113 6.006 0.666 3.161 H11B XB5 40 XB5 H12 H4 H 0 1 N N N N N N 52.134 34.715 -0.630 2.227 -0.633 -0.230 H12 XB5 41 XB5 H4 H5 H 0 1 N N N N N N 49.584 37.830 0.798 6.237 -1.940 0.453 H4 XB5 42 XB5 H3 H6 H 0 1 N N N N N N 47.923 36.161 1.464 5.546 -4.274 0.106 H3 XB5 43 XB5 H1B H7 H 0 1 N N N N N N 47.295 33.341 0.338 2.668 -5.608 0.449 H1B XB5 44 XB5 H1C H8 H 0 1 N N N N N N 48.431 32.530 1.468 2.331 -5.256 -1.263 H1C XB5 45 XB5 H1A H9 H 0 1 N N N N N N 47.404 33.886 2.046 3.951 -5.803 -0.770 H1A XB5 46 XB5 H16 H10 H 0 1 N N N N N N 50.720 30.061 0.757 -1.434 -3.279 -0.623 H16 XB5 47 XB5 H19 H11 H 0 1 N N N N N N 51.038 29.201 -1.381 -3.558 -2.476 0.002 H19 XB5 48 XB5 H17C H12 H 0 0 N N N N N N 52.458 29.100 2.232 -0.655 -3.485 -2.968 H17C XB5 49 XB5 H17B H13 H 0 0 N N N N N N 53.160 30.739 2.444 -2.327 -2.880 -2.902 H17B XB5 50 XB5 H17A H14 H 0 0 N N N N N N 51.497 30.392 3.028 -0.986 -1.756 -3.231 H17A XB5 51 XB5 H24C H15 H 0 0 N N N N N N 51.430 26.423 -7.243 -9.249 0.429 1.555 H24C XB5 52 XB5 H24B H16 H 0 0 N N N N N N 52.701 27.660 -7.524 -8.918 -0.342 3.125 H24B XB5 53 XB5 H24A H17 H 0 0 N N N N N N 53.137 26.069 -6.813 -8.238 1.262 2.760 H24A XB5 54 XB5 H10B H18 H 0 0 N N N N N N 55.947 40.547 -0.520 5.101 4.227 1.165 H10B XB5 55 XB5 H10A H19 H 0 0 N N N N N N 56.004 39.129 0.582 5.019 4.138 2.941 H10A XB5 56 XB5 H10C H20 H 0 0 N N N N N N 56.463 38.944 -1.145 6.600 4.163 2.122 H10C XB5 57 XB5 H22 H21 H 0 1 N N N N N N 54.063 28.190 -4.947 -6.128 1.370 1.165 H22 XB5 58 XB5 H26 H22 H 0 1 N N N N N N 50.258 27.997 -3.057 -5.452 -2.865 0.929 H26 XB5 59 XB5 H27 H23 H 0 1 N N N N N N 54.927 29.105 -3.156 -4.249 1.743 0.247 H27 XB5 60 XB5 H32A H24 H 0 0 N N N N N N 58.470 33.610 -0.382 0.112 6.140 -1.954 H32A XB5 61 XB5 H32B H25 H 0 0 N N N N N N 58.542 32.558 1.073 0.277 4.931 -3.250 H32B XB5 62 XB5 H33A H26 H 0 0 N N N N N N 60.796 33.174 0.299 2.428 5.261 -2.060 H33A XB5 63 XB5 H33C H27 H 0 0 N N N N N N 60.515 31.407 0.144 1.646 4.818 -0.524 H33C XB5 64 XB5 H33B H28 H 0 0 N N N N N N 60.443 32.459 -1.311 1.812 3.609 -1.820 H33B XB5 65 XB5 H34 H29 H 0 1 N N N N N N 59.354 30.637 -2.037 -2.097 5.802 -0.752 H34 XB5 66 XB5 H35 H30 H 0 1 N N N N N N 57.220 29.227 -2.763 -3.519 3.757 0.066 H35 XB5 67 XB5 H36 H31 H 0 1 N N N N N N 54.328 31.056 0.602 -0.625 0.242 -1.473 H36 XB5 68 XB5 H7B H32 H 0 1 N N N N N N 52.863 36.146 -1.523 6.657 0.001 -0.201 H7B XB5 69 XB5 H7A H33 H 0 1 N N N N N N 52.579 37.796 -2.175 6.308 -0.154 1.538 H7A XB5 70 XB5 H8B H34 H 0 1 N N N N N N 54.148 37.380 0.366 7.354 2.051 0.941 H8B XB5 71 XB5 H8A H35 H 0 1 N N N N N N 54.927 37.147 -1.236 5.940 2.406 -0.080 H8A XB5 72 XB5 H15 H36 H 0 1 N N N N N N 51.805 32.601 1.615 0.555 -1.151 -0.827 H15 XB5 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XB5 C1 C2 SING N N 1 XB5 C2 C3 DOUB Y N 2 XB5 C3 C4 SING Y N 3 XB5 C4 C5 DOUB Y N 4 XB5 C5 O6 SING N N 5 XB5 O6 C7 SING N N 6 XB5 C7 C8 SING N N 7 XB5 C8 N9 SING N N 8 XB5 N9 C10 SING N N 9 XB5 N9 C11 SING N N 10 XB5 C5 C12 SING Y N 11 XB5 C12 C13 DOUB Y N 12 XB5 C13 C14 SING N N 13 XB5 C14 N15 SING N N 14 XB5 N15 C16 SING N N 15 XB5 C16 C17 SING N N 16 XB5 C16 C18 SING N N 17 XB5 C18 C19 DOUB Y N 18 XB5 C19 C20 SING Y N 19 XB5 C20 C21 SING N N 20 XB5 C21 C22 DOUB Y N 21 XB5 C22 N23 SING Y N 22 XB5 N23 C24 SING N N 23 XB5 N23 N25 SING Y N 24 XB5 N25 C26 DOUB Y N 25 XB5 C20 C27 DOUB Y N 26 XB5 C27 C28 SING Y N 27 XB5 C28 C29 SING N N 28 XB5 C29 N30 DOUB Y N 29 XB5 N30 N31 SING Y N 30 XB5 N31 C32 SING N N 31 XB5 C32 C33 SING N N 32 XB5 N31 C34 SING Y N 33 XB5 C34 C35 DOUB Y N 34 XB5 C28 C36 DOUB Y N 35 XB5 C14 O37 DOUB N N 36 XB5 C13 C2 SING Y N 37 XB5 C36 C18 SING Y N 38 XB5 C26 C21 SING Y N 39 XB5 C35 C29 SING Y N 40 XB5 C11 H11A SING N N 41 XB5 C11 H11C SING N N 42 XB5 C11 H11B SING N N 43 XB5 C12 H12 SING N N 44 XB5 C4 H4 SING N N 45 XB5 C3 H3 SING N N 46 XB5 C1 H1B SING N N 47 XB5 C1 H1C SING N N 48 XB5 C1 H1A SING N N 49 XB5 C16 H16 SING N N 50 XB5 C19 H19 SING N N 51 XB5 C17 H17C SING N N 52 XB5 C17 H17B SING N N 53 XB5 C17 H17A SING N N 54 XB5 C24 H24C SING N N 55 XB5 C24 H24B SING N N 56 XB5 C24 H24A SING N N 57 XB5 C10 H10B SING N N 58 XB5 C10 H10A SING N N 59 XB5 C10 H10C SING N N 60 XB5 C22 H22 SING N N 61 XB5 C26 H26 SING N N 62 XB5 C27 H27 SING N N 63 XB5 C32 H32A SING N N 64 XB5 C32 H32B SING N N 65 XB5 C33 H33A SING N N 66 XB5 C33 H33C SING N N 67 XB5 C33 H33B SING N N 68 XB5 C34 H34 SING N N 69 XB5 C35 H35 SING N N 70 XB5 C36 H36 SING N N 71 XB5 C7 H7B SING N N 72 XB5 C7 H7A SING N N 73 XB5 C8 H8B SING N N 74 XB5 C8 H8A SING N N 75 XB5 N15 H15 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XB5 SMILES ACDLabs 12.01 "CCn1ccc(n1)c1cc(cc(c1)c1cn(C)nc1)C(C)NC(=O)c1cc(OCCN(C)C)ccc1C" XB5 InChI InChI 1.06 "InChI=1S/C29H36N6O2/c1-7-35-11-10-28(32-35)24-15-22(14-23(16-24)25-18-30-34(6)19-25)21(3)31-29(36)27-17-26(9-8-20(27)2)37-13-12-33(4)5/h8-11,14-19,21H,7,12-13H2,1-6H3,(H,31,36)" XB5 InChIKey InChI 1.06 ZOMNORZQANASQP-UHFFFAOYSA-N XB5 SMILES_CANONICAL CACTVS 3.385 "CCn1ccc(n1)c2cc(cc(c2)c3cnn(C)c3)[C@@H](C)NC(=O)c4cc(OCCN(C)C)ccc4C" XB5 SMILES CACTVS 3.385 "CCn1ccc(n1)c2cc(cc(c2)c3cnn(C)c3)[CH](C)NC(=O)c4cc(OCCN(C)C)ccc4C" XB5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCn1ccc(n1)c2cc(cc(c2)[C@@H](C)NC(=O)c3cc(ccc3C)OCCN(C)C)c4cnn(c4)C" XB5 SMILES "OpenEye OEToolkits" 2.0.7 "CCn1ccc(n1)c2cc(cc(c2)C(C)NC(=O)c3cc(ccc3C)OCCN(C)C)c4cnn(c4)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XB5 "SYSTEMATIC NAME" ACDLabs 12.01 "5-[2-(dimethylamino)ethoxy]-N-{(1R)-1-[(3M,5P)-3-(1-ethyl-1H-pyrazol-3-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-2-methylbenzamide" XB5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[2-(dimethylamino)ethoxy]-~{N}-[(1~{R})-1-[3-(1-ethylpyrazol-3-yl)-5-(1-methylpyrazol-4-yl)phenyl]ethyl]-2-methyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XB5 "Create component" 2023-10-26 RCSB XB5 "Initial release" 2024-04-03 RCSB #