data_XB8 # _chem_comp.id XB8 _chem_comp.name "~{N}-[3-(2-fluorophenyl)propyl]-~{N}-[(3-methoxy-2-phenylmethoxy-phenyl)methyl]cyclobutanamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 F N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-06 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 433.558 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XB8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CGO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XB8 C01 C1 C 0 1 N N N -14.058 -38.023 -21.020 3.655 -3.974 -1.961 C01 XB8 1 XB8 C03 C2 C 0 1 Y N N -15.102 -39.703 -22.353 2.469 -2.788 -0.275 C03 XB8 2 XB8 C04 C3 C 0 1 Y N N -13.852 -40.342 -22.530 2.058 -4.015 0.221 C04 XB8 3 XB8 C05 C4 C 0 1 Y N N -13.797 -41.650 -23.073 1.242 -4.072 1.335 C05 XB8 4 XB8 C06 C5 C 0 1 Y N N -15.000 -42.323 -23.439 0.833 -2.906 1.956 C06 XB8 5 XB8 C07 C6 C 0 1 Y N N -16.277 -41.693 -23.270 1.239 -1.679 1.467 C07 XB8 6 XB8 C08 C7 C 0 1 N N N -17.605 -42.487 -23.690 0.792 -0.411 2.147 C08 XB8 7 XB8 C10 C8 C 0 1 N N N -19.429 -43.737 -22.510 -1.500 -0.658 1.404 C10 XB8 8 XB8 C11 C9 C 0 1 N N N -19.874 -42.426 -21.950 -2.527 -0.127 0.403 C11 XB8 9 XB8 C12 C10 C 0 1 N N N -20.598 -42.516 -20.585 -3.772 -1.016 0.428 C12 XB8 10 XB8 C13 C11 C 0 1 Y N N -21.473 -41.265 -20.363 -4.783 -0.493 -0.558 C13 XB8 11 XB8 C14 C12 C 0 1 Y N N -20.909 -40.082 -19.813 -4.909 -1.086 -1.800 C14 XB8 12 XB8 C15 C13 C 0 1 Y N N -21.705 -38.913 -19.616 -5.837 -0.605 -2.706 C15 XB8 13 XB8 C16 C14 C 0 1 Y N N -23.091 -38.910 -19.997 -6.640 0.469 -2.370 C16 XB8 14 XB8 C17 C15 C 0 1 Y N N -23.691 -40.059 -20.555 -6.516 1.063 -1.129 C17 XB8 15 XB8 C18 C16 C 0 1 Y N N -22.866 -41.201 -20.735 -5.591 0.580 -0.219 C18 XB8 16 XB8 C20 C17 C 0 1 N N N -17.479 -44.994 -23.330 -0.611 1.544 1.875 C20 XB8 17 XB8 C21 C18 C 0 1 N N N -17.428 -46.173 -22.266 0.628 2.444 2.017 C21 XB8 18 XB8 C22 C19 C 0 1 N N N -18.333 -47.057 -23.212 -0.238 3.590 1.467 C22 XB8 19 XB8 C23 C20 C 0 1 N N N -18.602 -45.807 -24.131 -1.089 2.510 0.778 C23 XB8 20 XB8 C24 C21 C 0 1 Y N N -16.317 -40.362 -22.707 2.062 -1.615 0.354 C24 XB8 21 XB8 C26 C22 C 0 1 N N N -18.000 -38.902 -23.662 3.741 0.068 0.296 C26 XB8 22 XB8 C27 C23 C 0 1 Y N N -19.391 -38.299 -23.438 4.072 1.342 -0.439 C27 XB8 23 XB8 C28 C24 C 0 1 Y N N -20.531 -39.150 -23.339 3.838 2.566 0.159 C28 XB8 24 XB8 C29 C25 C 0 1 Y N N -21.811 -38.599 -23.126 4.142 3.734 -0.515 C29 XB8 25 XB8 C30 C26 C 0 1 Y N N -21.963 -37.206 -23.003 4.680 3.677 -1.788 C30 XB8 26 XB8 C31 C27 C 0 1 Y N N -20.849 -36.354 -23.104 4.914 2.453 -2.385 C31 XB8 27 XB8 C32 C28 C 0 1 Y N N -19.571 -36.900 -23.321 4.615 1.285 -1.709 C32 XB8 28 XB8 F19 F1 F 0 1 N N N -23.494 -42.306 -21.290 -5.470 1.160 0.995 F19 XB8 29 XB8 N09 N1 N 0 1 N N N -17.965 -43.684 -22.773 -0.305 0.196 1.380 N09 XB8 30 XB8 O02 O1 O 0 1 N N N -15.175 -38.389 -21.812 3.273 -2.730 -1.371 O02 XB8 31 XB8 O25 O2 O 0 1 N N N -17.593 -39.732 -22.553 2.463 -0.408 -0.129 O25 XB8 32 XB8 H1 H1 H 0 1 N N N -14.195 -36.999 -20.643 2.764 -4.514 -2.279 H1 XB8 33 XB8 H2 H2 H 0 1 N N N -13.968 -38.717 -20.171 4.294 -3.785 -2.824 H2 XB8 34 XB8 H3 H3 H 0 1 N N N -13.144 -38.070 -21.631 4.200 -4.571 -1.229 H3 XB8 35 XB8 H4 H4 H 0 1 N N N -12.941 -39.834 -22.252 2.376 -4.926 -0.263 H4 XB8 36 XB8 H5 H5 H 0 1 N N N -12.843 -42.138 -23.210 0.922 -5.029 1.720 H5 XB8 37 XB8 H6 H6 H 0 1 N N N -14.948 -43.321 -23.849 0.191 -2.955 2.823 H6 XB8 38 XB8 H7 H7 H 0 1 N N N -18.446 -41.779 -23.674 0.446 -0.642 3.155 H7 XB8 39 XB8 H8 H8 H 0 1 N N N -17.466 -42.869 -24.712 1.627 0.287 2.201 H8 XB8 40 XB8 H9 H9 H 0 1 N N N -19.965 -43.937 -23.450 -1.931 -0.651 2.405 H9 XB8 41 XB8 H10 H10 H 0 1 N N N -19.644 -44.538 -21.788 -1.224 -1.678 1.135 H10 XB8 42 XB8 H11 H11 H 0 1 N N N -18.987 -41.788 -21.825 -2.803 0.893 0.672 H11 XB8 43 XB8 H12 H12 H 0 1 N N N -20.561 -41.961 -22.672 -2.096 -0.134 -0.598 H12 XB8 44 XB8 H13 H13 H 0 1 N N N -21.235 -43.413 -20.570 -3.495 -2.036 0.159 H13 XB8 45 XB8 H14 H14 H 0 1 N N N -19.850 -42.584 -19.781 -4.203 -1.009 1.429 H14 XB8 46 XB8 H15 H15 H 0 1 N N N -19.864 -40.067 -19.540 -4.282 -1.925 -2.063 H15 XB8 47 XB8 H16 H16 H 0 1 N N N -21.265 -38.029 -19.180 -5.934 -1.070 -3.676 H16 XB8 48 XB8 H17 H17 H 0 1 N N N -23.681 -38.017 -19.854 -7.363 0.843 -3.079 H17 XB8 49 XB8 H18 H18 H 0 1 N N N -24.734 -40.069 -20.834 -7.143 1.903 -0.867 H18 XB8 50 XB8 H19 H19 H 0 1 N N N -16.543 -44.909 -23.902 -1.248 1.536 2.760 H19 XB8 51 XB8 H20 H20 H 0 1 N N N -16.421 -46.582 -22.095 0.944 2.593 3.050 H20 XB8 52 XB8 H21 H21 H 0 1 N N N -17.893 -45.927 -21.300 1.450 2.162 1.360 H21 XB8 53 XB8 H22 H22 H 0 1 N N N -19.234 -47.457 -22.725 -0.774 4.141 2.239 H22 XB8 54 XB8 H23 H23 H 0 1 N N N -17.794 -47.874 -23.713 0.290 4.241 0.771 H23 XB8 55 XB8 H24 H24 H 0 1 N N N -19.615 -45.388 -24.038 -0.737 2.247 -0.219 H24 XB8 56 XB8 H25 H25 H 0 1 N N N -18.369 -45.970 -25.194 -2.160 2.711 0.811 H25 XB8 57 XB8 H26 H26 H 0 1 N N N -18.019 -39.513 -24.576 4.500 -0.684 0.079 H26 XB8 58 XB8 H27 H27 H 0 1 N N N -17.273 -38.086 -23.782 3.719 0.263 1.368 H27 XB8 59 XB8 H28 H28 H 0 1 N N N -20.413 -40.220 -23.427 3.418 2.609 1.153 H28 XB8 60 XB8 H29 H29 H 0 1 N N N -22.674 -39.245 -23.057 3.958 4.690 -0.048 H29 XB8 61 XB8 H30 H30 H 0 1 N N N -22.943 -36.787 -22.830 4.917 4.590 -2.315 H30 XB8 62 XB8 H31 H31 H 0 1 N N N -20.974 -35.285 -23.015 5.334 2.409 -3.379 H31 XB8 63 XB8 H32 H32 H 0 1 N N N -18.717 -36.244 -23.399 4.802 0.329 -2.175 H32 XB8 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XB8 C23 C20 SING N N 1 XB8 C23 C22 SING N N 2 XB8 C08 C07 SING N N 3 XB8 C08 N09 SING N N 4 XB8 C26 C27 SING N N 5 XB8 C26 O25 SING N N 6 XB8 C06 C07 DOUB Y N 7 XB8 C06 C05 SING Y N 8 XB8 C27 C28 DOUB Y N 9 XB8 C27 C32 SING Y N 10 XB8 C28 C29 SING Y N 11 XB8 C20 N09 SING N N 12 XB8 C20 C21 SING N N 13 XB8 C32 C31 DOUB Y N 14 XB8 C07 C24 SING Y N 15 XB8 C22 C21 SING N N 16 XB8 C29 C30 DOUB Y N 17 XB8 C31 C30 SING Y N 18 XB8 C05 C04 DOUB Y N 19 XB8 N09 C10 SING N N 20 XB8 C24 O25 SING N N 21 XB8 C24 C03 DOUB Y N 22 XB8 C04 C03 SING Y N 23 XB8 C10 C11 SING N N 24 XB8 C03 O02 SING N N 25 XB8 C11 C12 SING N N 26 XB8 O02 C01 SING N N 27 XB8 F19 C18 SING N N 28 XB8 C18 C17 DOUB Y N 29 XB8 C18 C13 SING Y N 30 XB8 C12 C13 SING N N 31 XB8 C17 C16 SING Y N 32 XB8 C13 C14 DOUB Y N 33 XB8 C16 C15 DOUB Y N 34 XB8 C14 C15 SING Y N 35 XB8 C01 H1 SING N N 36 XB8 C01 H2 SING N N 37 XB8 C01 H3 SING N N 38 XB8 C04 H4 SING N N 39 XB8 C05 H5 SING N N 40 XB8 C06 H6 SING N N 41 XB8 C08 H7 SING N N 42 XB8 C08 H8 SING N N 43 XB8 C10 H9 SING N N 44 XB8 C10 H10 SING N N 45 XB8 C11 H11 SING N N 46 XB8 C11 H12 SING N N 47 XB8 C12 H13 SING N N 48 XB8 C12 H14 SING N N 49 XB8 C14 H15 SING N N 50 XB8 C15 H16 SING N N 51 XB8 C16 H17 SING N N 52 XB8 C17 H18 SING N N 53 XB8 C20 H19 SING N N 54 XB8 C21 H20 SING N N 55 XB8 C21 H21 SING N N 56 XB8 C22 H22 SING N N 57 XB8 C22 H23 SING N N 58 XB8 C23 H24 SING N N 59 XB8 C23 H25 SING N N 60 XB8 C26 H26 SING N N 61 XB8 C26 H27 SING N N 62 XB8 C28 H28 SING N N 63 XB8 C29 H29 SING N N 64 XB8 C30 H30 SING N N 65 XB8 C31 H31 SING N N 66 XB8 C32 H32 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XB8 InChI InChI 1.06 "InChI=1S/C28H32FNO2/c1-31-27-18-7-13-24(28(27)32-21-22-10-3-2-4-11-22)20-30(25-15-8-16-25)19-9-14-23-12-5-6-17-26(23)29/h2-7,10-13,17-18,25H,8-9,14-16,19-21H2,1H3" XB8 InChIKey InChI 1.06 KZOIYQAEEQKJSB-UHFFFAOYSA-N XB8 SMILES_CANONICAL CACTVS 3.385 "COc1cccc(CN(CCCc2ccccc2F)C3CCC3)c1OCc4ccccc4" XB8 SMILES CACTVS 3.385 "COc1cccc(CN(CCCc2ccccc2F)C3CCC3)c1OCc4ccccc4" XB8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cccc(c1OCc2ccccc2)CN(CCCc3ccccc3F)C4CCC4" XB8 SMILES "OpenEye OEToolkits" 2.0.7 "COc1cccc(c1OCc2ccccc2)CN(CCCc3ccccc3F)C4CCC4" # _pdbx_chem_comp_identifier.comp_id XB8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[3-(2-fluorophenyl)propyl]-~{N}-[(3-methoxy-2-phenylmethoxy-phenyl)methyl]cyclobutanamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XB8 "Create component" 2023-02-06 PDBE XB8 "Initial release" 2023-06-14 RCSB #