data_XBE # _chem_comp.id XBE _chem_comp.name "naphthalene-1,3,7-trisulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H8 O9 S3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.360 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XBE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8P96 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XBE C10 C1 C 0 1 Y N N N N N -4.154 25.902 188.865 1.645 0.093 0.049 C10 XBE 1 XBE C01 C2 C 0 1 Y N N N N N -7.382 27.159 190.146 -1.612 -1.695 -0.050 C01 XBE 2 XBE C02 C3 C 0 1 Y N N N N N -8.042 25.966 190.404 -2.468 -0.637 -0.053 C02 XBE 3 XBE C03 C4 C 0 1 Y N N N N N -7.422 24.754 190.151 -1.992 0.672 -0.023 C03 XBE 4 XBE C04 C5 C 0 1 Y N N N N N -6.136 24.719 189.646 -0.656 0.932 0.011 C04 XBE 5 XBE C05 C6 C 0 1 Y N N N N N -5.457 25.923 189.380 0.259 -0.135 0.015 C05 XBE 6 XBE C06 C7 C 0 1 Y N N N N N -6.071 27.128 189.629 -0.225 -1.467 -0.016 C06 XBE 7 XBE C07 C8 C 0 1 Y N N N N N -5.389 28.332 189.363 0.690 -2.533 -0.012 C07 XBE 8 XBE C08 C9 C 0 1 Y N N N N N -4.097 28.304 188.852 2.026 -2.274 0.022 C08 XBE 9 XBE C09 C10 C 0 1 Y N N N N N -3.483 27.081 188.602 2.502 -0.965 0.047 C09 XBE 10 XBE O12 O1 O 0 1 N N N N N N -1.714 25.984 186.812 4.829 -1.846 0.637 O12 XBE 11 XBE O13 O2 O 0 1 N N N N N N -0.835 26.612 189.031 4.718 -0.585 -1.352 O13 XBE 12 XBE O14 O3 O 0 1 N N N N N N -1.393 28.269 187.245 4.416 0.619 0.653 O14 XBE 13 XBE O16 O4 O 0 1 N N N N N N -4.306 23.063 188.310 -0.121 3.004 1.409 O16 XBE 14 XBE O17 O5 O 0 1 N N N N N N -6.449 22.242 188.656 1.108 2.626 -0.735 O17 XBE 15 XBE O18 O6 O 0 1 N N N N N N -4.942 22.462 190.642 -1.102 3.446 -0.689 O18 XBE 16 XBE O20 O7 O 0 1 N N N N N N -9.871 26.942 192.192 -4.682 -1.024 1.346 O20 XBE 17 XBE O21 O8 O 0 1 N N N N N N -10.066 24.549 191.540 -4.795 0.247 -0.636 O21 XBE 18 XBE O22 O9 O 0 1 N N N N N N -10.751 26.156 189.982 -4.383 -2.218 -0.664 O22 XBE 19 XBE S11 S1 S 0 1 N N N N N N -1.797 26.988 187.935 4.240 -0.674 0.091 S11 XBE 20 XBE S15 S2 S 0 1 N N N N N N -5.406 23.084 189.345 -0.078 2.595 0.049 S15 XBE 21 XBE S19 S3 S 0 1 N N N N N N -9.726 25.942 191.071 -4.205 -0.928 -0.096 S19 XBE 22 XBE H1 H1 H 0 1 N N N N N N -3.670 24.956 188.672 2.029 1.102 0.073 H1 XBE 23 XBE H2 H2 H 0 1 N N N N N N -7.869 28.103 190.340 -1.995 -2.704 -0.074 H2 XBE 24 XBE H3 H3 H 0 1 N N N N N N -7.946 23.831 190.349 -2.693 1.494 -0.027 H3 XBE 25 XBE H4 H4 H 0 1 N N N N N N -5.871 29.279 189.557 0.335 -3.553 -0.035 H4 XBE 26 XBE H5 H5 H 0 1 N N N N N N -3.573 29.226 188.650 2.727 -3.095 0.026 H5 XBE 27 XBE H6 H6 H 0 1 N N N N N N -0.373 25.818 188.789 5.667 -0.425 -1.442 H6 XBE 28 XBE H7 H7 H 0 1 N N N N N N -4.040 22.177 190.552 -0.879 4.386 -0.727 H7 XBE 29 XBE H8 H8 H 0 1 N N N N N N -10.151 26.495 192.982 -5.631 -1.184 1.437 H8 XBE 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XBE O12 S11 DOUB N N 1 XBE O14 S11 DOUB N N 2 XBE S11 C09 SING N N 3 XBE S11 O13 SING N N 4 XBE O16 S15 DOUB N N 5 XBE C09 C08 DOUB Y N 6 XBE C09 C10 SING Y N 7 XBE O17 S15 DOUB N N 8 XBE C08 C07 SING Y N 9 XBE C10 C05 DOUB Y N 10 XBE S15 C04 SING N N 11 XBE S15 O18 SING N N 12 XBE C07 C06 DOUB Y N 13 XBE C05 C06 SING Y N 14 XBE C05 C04 SING Y N 15 XBE C06 C01 SING Y N 16 XBE C04 C03 DOUB Y N 17 XBE O22 S19 DOUB N N 18 XBE C01 C02 DOUB Y N 19 XBE C03 C02 SING Y N 20 XBE C02 S19 SING N N 21 XBE S19 O21 DOUB N N 22 XBE S19 O20 SING N N 23 XBE C10 H1 SING N N 24 XBE C01 H2 SING N N 25 XBE C03 H3 SING N N 26 XBE C07 H4 SING N N 27 XBE C08 H5 SING N N 28 XBE O13 H6 SING N N 29 XBE O18 H7 SING N N 30 XBE O20 H8 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XBE InChI InChI 1.06 "InChI=1S/C10H8O9S3/c11-20(12,13)7-2-1-6-3-8(21(14,15)16)5-10(9(6)4-7)22(17,18)19/h1-5H,(H,11,12,13)(H,14,15,16)(H,17,18,19)" XBE InChIKey InChI 1.06 FEWNRIKJXAQRJJ-UHFFFAOYSA-N XBE SMILES_CANONICAL CACTVS 3.385 "O[S](=O)(=O)c1ccc2cc(cc(c2c1)[S](O)(=O)=O)[S](O)(=O)=O" XBE SMILES CACTVS 3.385 "O[S](=O)(=O)c1ccc2cc(cc(c2c1)[S](O)(=O)=O)[S](O)(=O)=O" XBE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc2c1cc(cc2S(=O)(=O)O)S(=O)(=O)O)S(=O)(=O)O" XBE SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc2c1cc(cc2S(=O)(=O)O)S(=O)(=O)O)S(=O)(=O)O" # _pdbx_chem_comp_identifier.comp_id XBE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "naphthalene-1,3,7-trisulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XBE "Create component" 2023-06-06 PDBE XBE "Initial release" 2024-06-26 RCSB #